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The map label for this gene is 45657118

Identifier: 45657118

GI number: 45657118

Start: 1527974

End: 1528639

Strand: Direct

Name: 45657118

Synonym: LIC11235

Alternate gene names: NA

Gene position: 1527974-1528639 (Clockwise)

Preceding gene: 45657117

Following gene: 45657119

Centisome position: 35.72

GC content: 38.14

Gene sequence:

>666_bases
TTGTCTCAATCAAAAGGTTACTATTTCAAAAAGCTATTGGATTTGAAATGTTGCGGTTTTATTTGGATGAGAATGCAAAC
TAAATCGATCTTAAATCGGAAACATACTTTTTTGATACGTGTCGTTTTGACTGTTATCCTCTTGGTCTTTTCGGGAAATT
GTTCTTATTCTGAAAGTCTACGGGAGAGCTTACGGAATTATTTTCTTGTTAAGGCTGCGTTACAATTCAATGAACACATC
TCCAATAATGAATGGTCTGAGGCGGCTTCGATTGCTCATTTATATTCTTTTACGATCCCGATTCTTGGAATTGGGAATGC
TCCATTGACAGGGTTTAAAAGTGGGAATACATATTCTTCCGCAAGAGAATTTTTTGCCGCAGATATCATTGCGTATACCG
GGATCACAAAGGATTTTGGACTTTTGTTTCTCGGGAATCAAATGATTCCGAACGATGTCACTGATCCCAGGTTGTATTTT
AATCTTGCCTGTCTCTATGCGATTCAGAGAGATAAAAAAGAAATGCTCCACAATGTTGCGATCGCCCTTCGTCTAAGACA
ATCTCCTAAGGATTTCCTAACGGATTCAGATTTTGACGGATTTAAAAAGGACCCAGATTTTATTCGGATTGTTACTGGAC
GATCTGCTGCGCCGTTTTCTAAATAA

Upstream 100 bases:

>100_bases
TTTTATATTTACCCCTGTTTTCATTGCCCGTTGGTCCATATTCTTTCTTCGATTATTTGGTTGGAGGAGAAATCGCAAAT
GGATAAGGAAGCGGCCCAAG

Downstream 100 bases:

>100_bases
AATGTAGGAACTACCACAACGTCTATGTTTTGCAGTTGGTTTTTGAAAATGGTTGAGCTCATACAAACTCCCAATTACGA
GAAATTCGGAATCTGGCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MSQSKGYYFKKLLDLKCCGFIWMRMQTKSILNRKHTFLIRVVLTVILLVFSGNCSYSESLRESLRNYFLVKAALQFNEHI
SNNEWSEAASIAHLYSFTIPILGIGNAPLTGFKSGNTYSSAREFFAADIIAYTGITKDFGLLFLGNQMIPNDVTDPRLYF
NLACLYAIQRDKKEMLHNVAIALRLRQSPKDFLTDSDFDGFKKDPDFIRIVTGRSAAPFSK

Sequences:

>Translated_221_residues
MSQSKGYYFKKLLDLKCCGFIWMRMQTKSILNRKHTFLIRVVLTVILLVFSGNCSYSESLRESLRNYFLVKAALQFNEHI
SNNEWSEAASIAHLYSFTIPILGIGNAPLTGFKSGNTYSSAREFFAADIIAYTGITKDFGLLFLGNQMIPNDVTDPRLYF
NLACLYAIQRDKKEMLHNVAIALRLRQSPKDFLTDSDFDGFKKDPDFIRIVTGRSAAPFSK
>Mature_220_residues
SQSKGYYFKKLLDLKCCGFIWMRMQTKSILNRKHTFLIRVVLTVILLVFSGNCSYSESLRESLRNYFLVKAALQFNEHIS
NNEWSEAASIAHLYSFTIPILGIGNAPLTGFKSGNTYSSAREFFAADIIAYTGITKDFGLLFLGNQMIPNDVTDPRLYFN
LACLYAIQRDKKEMLHNVAIALRLRQSPKDFLTDSDFDGFKKDPDFIRIVTGRSAAPFSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25159; Mature: 25028

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSKGYYFKKLLDLKCCGFIWMRMQTKSILNRKHTFLIRVVLTVILLVFSGNCSYSESL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
RESLRNYFLVKAALQFNEHISNNEWSEAASIAHLYSFTIPILGIGNAPLTGFKSGNTYSS
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHH
AREFFAADIIAYTGITKDFGLLFLGNQMIPNDVTDPRLYFNLACLYAIQRDKKEMLHNVA
HHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IALRLRQSPKDFLTDSDFDGFKKDPDFIRIVTGRSAAPFSK
HHHHHCCCCHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCC
>Mature Secondary Structure 
SQSKGYYFKKLLDLKCCGFIWMRMQTKSILNRKHTFLIRVVLTVILLVFSGNCSYSESL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
RESLRNYFLVKAALQFNEHISNNEWSEAASIAHLYSFTIPILGIGNAPLTGFKSGNTYSS
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHH
AREFFAADIIAYTGITKDFGLLFLGNQMIPNDVTDPRLYFNLACLYAIQRDKKEMLHNVA
HHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IALRLRQSPKDFLTDSDFDGFKKDPDFIRIVTGRSAAPFSK
HHHHHCCCCHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA