Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
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Accession | NC_005823 |
Length | 4,277,185 |
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The map label for this gene is 45657066
Identifier: 45657066
GI number: 45657066
Start: 1453795
End: 1454316
Strand: Direct
Name: 45657066
Synonym: LIC11182
Alternate gene names: NA
Gene position: 1453795-1454316 (Clockwise)
Preceding gene: 45657065
Following gene: 45657068
Centisome position: 33.99
GC content: 40.42
Gene sequence:
>522_bases ATGTCACTATTTCTTTTTGAAACCTTTTCTGATAACTTTCAATCCAAACACAACGAAGTTACTTCCGGAAAGTGGTTCGG TTTAACTTCTTTAAACTTAGAAGGAAAACCTTTTGCCGCTTTTTTCGAAGGAAGTTTAGTGCTCAAGCTCGGAGCGGAAA AGATCGCCGAGATCATTTCTCGTTATCCGGGGGCAAAACTTTTTGATCCTTCCGGTAATAATAAAGCCATGAAAGATTGG CTTCAGATTCCGGCAGAATTTGAACAAGACTGGCTTAACTTGGCTGAGGACGCTTTGGTCTTTGCTGAAAAATCGTTGAG TGCCGTGGCGGTTCCTGCTAAGAAAAAAGCAGCACCTAAAAAAGCGGCCAAGAAAAAAGCCCCTGCTAAGAAAAAGAGCC CTGCAAAAAAGAAAGCGGCTAAGAAAAAATCTTCCGCTAAAAAAGCTAAAATGAAACCAAAAGCTAAGGCTAAGAAAAAA GTAGCTCGGAAAAAAACGGCTGCTAAAAAACGGAAAAGATAA
Upstream 100 bases:
>100_bases CTTTCCAAAAATTTACGGAGCTAGTATCGTAAATCTCTGGTTAGATTGATAAGAAAGATTTATTTCTTGAAAACTGACCG AAAAGGATTCTTCTTGGCGC
Downstream 100 bases:
>100_bases AACAATCCGATCTGCCCTTATTGAGTAATGAGGGCAGATAAGATATATCTTACAAATACCTTATGGGGATTCGCTTTCTA TAAAGCCCCAAAAAAAATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MSLFLFETFSDNFQSKHNEVTSGKWFGLTSLNLEGKPFAAFFEGSLVLKLGAEKIAEIISRYPGAKLFDPSGNNKAMKDW LQIPAEFEQDWLNLAEDALVFAEKSLSAVAVPAKKKAAPKKAAKKKAPAKKKSPAKKKAAKKKSSAKKAKMKPKAKAKKK VARKKTAAKKRKR
Sequences:
>Translated_173_residues MSLFLFETFSDNFQSKHNEVTSGKWFGLTSLNLEGKPFAAFFEGSLVLKLGAEKIAEIISRYPGAKLFDPSGNNKAMKDW LQIPAEFEQDWLNLAEDALVFAEKSLSAVAVPAKKKAAPKKAAKKKAPAKKKSPAKKKAAKKKSSAKKAKMKPKAKAKKK VARKKTAAKKRKR >Mature_172_residues SLFLFETFSDNFQSKHNEVTSGKWFGLTSLNLEGKPFAAFFEGSLVLKLGAEKIAEIISRYPGAKLFDPSGNNKAMKDWL QIPAEFEQDWLNLAEDALVFAEKSLSAVAVPAKKKAAPKKAAKKKAPAKKKSPAKKKAAKKKSSAKKAKMKPKAKAKKKV ARKKTAAKKRKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19080; Mature: 18948
Theoretical pI: Translated: 11.11; Mature: 11.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLFLFETFSDNFQSKHNEVTSGKWFGLTSLNLEGKPFAAFFEGSLVLKLGAEKIAEIIS CCEEEEEHHHHHHHHHHCCCCCCCEECEEECCCCCCCEEEHHCCCEEEEECHHHHHHHHH RYPGAKLFDPSGNNKAMKDWLQIPAEFEQDWLNLAEDALVFAEKSLSAVAVPAKKKAAPK HCCCCEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHCCHH KAAKKKAPAKKKSPAKKKAAKKKSSAKKAKMKPKAKAKKKVARKKTAAKKRKR HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SLFLFETFSDNFQSKHNEVTSGKWFGLTSLNLEGKPFAAFFEGSLVLKLGAEKIAEIIS CEEEEEHHHHHHHHHHCCCCCCCEECEEECCCCCCCEEEHHCCCEEEEECHHHHHHHHH RYPGAKLFDPSGNNKAMKDWLQIPAEFEQDWLNLAEDALVFAEKSLSAVAVPAKKKAAPK HCCCCEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHCCHH KAAKKKAPAKKKSPAKKKAAKKKSSAKKAKMKPKAKAKKKVARKKTAAKKRKR HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA