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The map label for this gene is 45657055

Identifier: 45657055

GI number: 45657055

Start: 1439445

End: 1440713

Strand: Direct

Name: 45657055

Synonym: LIC11171

Alternate gene names: NA

Gene position: 1439445-1440713 (Clockwise)

Preceding gene: 45657052

Following gene: 45657056

Centisome position: 33.65

GC content: 37.43

Gene sequence:

>1269_bases
ATGAACCTAAAAAGGATTTTTATATTCTTTCTTCTTCTTTGTCAATTACACTGTGCTACGTTTACGGGAACACTTGTCAA
TAAATGGGTAAAAGATTATTACGAGAGCACTAATATTACCGGAGTTGGCATTGGTTTGGCTGGAGATGGAGCGATTAGTG
TTTATATGGGAGTTCAATTTGGATTAGCCTTCGGACTTGCCTATGCCGCTGCTACGATCGTAGCTCTTCCTTTTATTTTT
TTCGGACTTTTACAACCTTTGAAAGTTCAGCCTGTACTTTATTTTCCAATATTTTCAAACGACGGTAAGGATTTGAGAGG
TCTTTTACAGCATGTTCCGCACGTAATTCCGTTTTATATTCGACCCATCGTAATCCCTTCTCATCCGAAAGAATCGATCG
AAAGAGAATTGGCTAAAAGTTTTTTTTCATCCGTGTATTTCAATTTTGACTTTCTTTATTCGTTTCAATATCTCAATTCA
ATCTCTACTTCTAAAATTTTAGAACATACTTCGATTGAGGAAATTCGAAATGATATACCTCGATTTAGAAAATTATTCAA
TGAAGACTTCGTATTTATTTCCGAAGCGCGTCTGAAATTCGGAGAATGTAAATTAGAAAAAATTTCTTATAAAGAAATCA
TGAAGTTCGAGGAACGTCTTTTAAGTAGACCCGTCTATCCTAGAGAGAAGGAAGATCAAGAGGAGACCGGGCTGATGGAA
GTTCAAGTGGAAATTAAAACGTATTTAGTTGATTTTAAAAACCAGAAGATAAGATCGTTTGAAATTTCTGAAACCGAAAG
AGGATATAATGATTTCGGGCAACGTGCCTGTCCCGATCCAATCCGAGCGGGAAAAATGGCTTTGAAGAACGTAGGTCTTT
CTCATACAAGAAAAATCTTTCCACAATGGAAGAAGACGAAACTGAATTTGATCCGAAACGATTCTGATCCGAATGTGCAG
AAATTATTGGAGGAAGGCTTCCAGTATTTTGGAAGAGGAGACGATGAGAACCACGAAATCTTTTTAATAAAACCGGAAGC
GTTAGAGGTTTGGAAACTCGCCTTGGCCCAATCCGGAAATCGATCCGAGGGCGCGTTTGCAAACATAGCTTACTATTATC
TAAACAACGGTTATTTAGAAGAGGCGATCGATTGGTTTCGGAAGGCCGCGGTTGCAAATCCGGATAGAGAAAAATTTTGG
AATCTAAGAATCAAAGATATCTTACACAAGAGAGAACAAGTCGAAGTGTATAATGATCTTAACAATTAA

Upstream 100 bases:

>100_bases
GGTTTGTAACGTGACGGGCTATTCCGGAGATAGTTTCTATCGTTTTCAAGAGTTATATGAAAAAAGAGAGAGCTTCACTC
TCAAGATTTGAGTAGACACA

Downstream 100 bases:

>100_bases
AAAATTGAGGATCCCTGAAAACGATTCGTATTGATTCCAATTAAAAAAACATTGGATGAAAAAATTTGTAGAGATTTTTA
CCAAAGATTAAAATCTGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MNLKRIFIFFLLLCQLHCATFTGTLVNKWVKDYYESTNITGVGIGLAGDGAISVYMGVQFGLAFGLAYAAATIVALPFIF
FGLLQPLKVQPVLYFPIFSNDGKDLRGLLQHVPHVIPFYIRPIVIPSHPKESIERELAKSFFSSVYFNFDFLYSFQYLNS
ISTSKILEHTSIEEIRNDIPRFRKLFNEDFVFISEARLKFGECKLEKISYKEIMKFEERLLSRPVYPREKEDQEETGLME
VQVEIKTYLVDFKNQKIRSFEISETERGYNDFGQRACPDPIRAGKMALKNVGLSHTRKIFPQWKKTKLNLIRNDSDPNVQ
KLLEEGFQYFGRGDDENHEIFLIKPEALEVWKLALAQSGNRSEGAFANIAYYYLNNGYLEEAIDWFRKAAVANPDREKFW
NLRIKDILHKREQVEVYNDLNN

Sequences:

>Translated_422_residues
MNLKRIFIFFLLLCQLHCATFTGTLVNKWVKDYYESTNITGVGIGLAGDGAISVYMGVQFGLAFGLAYAAATIVALPFIF
FGLLQPLKVQPVLYFPIFSNDGKDLRGLLQHVPHVIPFYIRPIVIPSHPKESIERELAKSFFSSVYFNFDFLYSFQYLNS
ISTSKILEHTSIEEIRNDIPRFRKLFNEDFVFISEARLKFGECKLEKISYKEIMKFEERLLSRPVYPREKEDQEETGLME
VQVEIKTYLVDFKNQKIRSFEISETERGYNDFGQRACPDPIRAGKMALKNVGLSHTRKIFPQWKKTKLNLIRNDSDPNVQ
KLLEEGFQYFGRGDDENHEIFLIKPEALEVWKLALAQSGNRSEGAFANIAYYYLNNGYLEEAIDWFRKAAVANPDREKFW
NLRIKDILHKREQVEVYNDLNN
>Mature_422_residues
MNLKRIFIFFLLLCQLHCATFTGTLVNKWVKDYYESTNITGVGIGLAGDGAISVYMGVQFGLAFGLAYAAATIVALPFIF
FGLLQPLKVQPVLYFPIFSNDGKDLRGLLQHVPHVIPFYIRPIVIPSHPKESIERELAKSFFSSVYFNFDFLYSFQYLNS
ISTSKILEHTSIEEIRNDIPRFRKLFNEDFVFISEARLKFGECKLEKISYKEIMKFEERLLSRPVYPREKEDQEETGLME
VQVEIKTYLVDFKNQKIRSFEISETERGYNDFGQRACPDPIRAGKMALKNVGLSHTRKIFPQWKKTKLNLIRNDSDPNVQ
KLLEEGFQYFGRGDDENHEIFLIKPEALEVWKLALAQSGNRSEGAFANIAYYYLNNGYLEEAIDWFRKAAVANPDREKFW
NLRIKDILHKREQVEVYNDLNN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49085; Mature: 49085

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKRIFIFFLLLCQLHCATFTGTLVNKWVKDYYESTNITGVGIGLAGDGAISVYMGVQF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEHHHHHH
GLAFGLAYAAATIVALPFIFFGLLQPLKVQPVLYFPIFSNDGKDLRGLLQHVPHVIPFYI
HHHHHHHHHHHHHHHHHHHHHHHCCCCEECEEEEEEEECCCCHHHHHHHHHCCHHHHHHH
RPIVIPSHPKESIERELAKSFFSSVYFNFDFLYSFQYLNSISTSKILEHTSIEEIRNDIP
CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHH
RFRKLFNEDFVFISEARLKFGECKLEKISYKEIMKFEERLLSRPVYPREKEDQEETGLME
HHHHHHCCCCEEEEHHHHHHCCCHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCEEE
VQVEIKTYLVDFKNQKIRSFEISETERGYNDFGQRACPDPIRAGKMALKNVGLSHTRKIF
EEEEHHHHHHHCCCCCEEEEECCHHHCCHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHC
PQWKKTKLNLIRNDSDPNVQKLLEEGFQYFGRGDDENHEIFLIKPEALEVWKLALAQSGN
CCHHHHHHHHEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHCCCC
RSEGAFANIAYYYLNNGYLEEAIDWFRKAAVANPDREKFWNLRIKDILHKREQVEVYNDL
CCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHCC
NN
CC
>Mature Secondary Structure
MNLKRIFIFFLLLCQLHCATFTGTLVNKWVKDYYESTNITGVGIGLAGDGAISVYMGVQF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEHHHHHH
GLAFGLAYAAATIVALPFIFFGLLQPLKVQPVLYFPIFSNDGKDLRGLLQHVPHVIPFYI
HHHHHHHHHHHHHHHHHHHHHHHCCCCEECEEEEEEEECCCCHHHHHHHHHCCHHHHHHH
RPIVIPSHPKESIERELAKSFFSSVYFNFDFLYSFQYLNSISTSKILEHTSIEEIRNDIP
CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHH
RFRKLFNEDFVFISEARLKFGECKLEKISYKEIMKFEERLLSRPVYPREKEDQEETGLME
HHHHHHCCCCEEEEHHHHHHCCCHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCEEE
VQVEIKTYLVDFKNQKIRSFEISETERGYNDFGQRACPDPIRAGKMALKNVGLSHTRKIF
EEEEHHHHHHHCCCCCEEEEECCHHHCCHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHC
PQWKKTKLNLIRNDSDPNVQKLLEEGFQYFGRGDDENHEIFLIKPEALEVWKLALAQSGN
CCHHHHHHHHEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHCCCC
RSEGAFANIAYYYLNNGYLEEAIDWFRKAAVANPDREKFWNLRIKDILHKREQVEVYNDL
CCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHCC
NN
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA