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The map label for this gene is yddE [C]

Identifier: 45657045

GI number: 45657045

Start: 1431985

End: 1432797

Strand: Direct

Name: yddE [C]

Synonym: LIC11161

Alternate gene names: 45657045

Gene position: 1431985-1432797 (Clockwise)

Preceding gene: 45657044

Following gene: 45657046

Centisome position: 33.48

GC content: 29.64

Gene sequence:

>813_bases
ATGAATAGTAAATTAACTAAATATGCAGTATTTAATGATGTATATGAAAAGGGTAACATTGCTGGTGTATTAATCGGATT
TACAATACCGAATGACTCCGAACTTATTAAAATGGCTAAAATGAATAATCTTCCAGTCTTATTGTATATTCAAAACGATA
ATGATGTATTTAATGTATCATTTTACAATAGCCAACGAAAGATGAATTTTTGTGGACATGGAGTATTGGCAGCATCAGCC
TTTTTAATGGATAATAATCATTCCTCAATATTACACATTCAGGGACACGCTTACAAGGTACATAAGGATCATTTAATGTA
CTATATGGAATTTAATTCTGAAATCAAAAAGGACCCTCGCCCAGACATTTCTCATTATTTGGATAGAATTTTTAAAAATA
CAATCTCGGAATGGAAAAATATTTCAGTGATTGATAATGGGAATAAAAAATTATTTGCTGAAGTGGCTAAACAAATTGAA
TATGATAGACTACATCCTAACGAAAATGAAATAATAAATTTATCAAAAGAATTTAATGTTAATGGAATATATATTTACAA
AAAAGATTCTTTTGGTAAAGACGGGCTTTTGCTAGAAGCAAGGTCATTTAATCCTCTTTCAGGGAAATTAGAAGATCGGG
CAACGGGTTCAGCCGTTATTTCCTTAATGTATTATTATCGAGATAAATATAATCGCATAGCTGTTAAACAAGGGATAAAA
GGTGATCAATGCTATTTAGAATCCTATTTAAATGCAAATGGAAAAATTATGTTAGGCGGAAAAGTTTTGTTAGAGAGAAA
GAATGATAAATAG

Upstream 100 bases:

>100_bases
ATATACAACCTCCTTTAAAAACGGTCAACAATCCCGGATTATAGGATGCAATTTTTGTAGTTATGAGTAATGAAAATTTT
TTCGAGGAATTTAAATTTGA

Downstream 100 bases:

>100_bases
TTTAGAACTTTTAAGAGAGTTTTTCATATCATAAATTTATAATAGACAGAGATCTCATTTGTTATTAGGTTTTGTGAGTC
CTATTTAATTTAAAGAAAAT

Product: phenazine biosynthesis-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MNSKLTKYAVFNDVYEKGNIAGVLIGFTIPNDSELIKMAKMNNLPVLLYIQNDNDVFNVSFYNSQRKMNFCGHGVLAASA
FLMDNNHSSILHIQGHAYKVHKDHLMYYMEFNSEIKKDPRPDISHYLDRIFKNTISEWKNISVIDNGNKKLFAEVAKQIE
YDRLHPNENEIINLSKEFNVNGIYIYKKDSFGKDGLLLEARSFNPLSGKLEDRATGSAVISLMYYYRDKYNRIAVKQGIK
GDQCYLESYLNANGKIMLGGKVLLERKNDK

Sequences:

>Translated_270_residues
MNSKLTKYAVFNDVYEKGNIAGVLIGFTIPNDSELIKMAKMNNLPVLLYIQNDNDVFNVSFYNSQRKMNFCGHGVLAASA
FLMDNNHSSILHIQGHAYKVHKDHLMYYMEFNSEIKKDPRPDISHYLDRIFKNTISEWKNISVIDNGNKKLFAEVAKQIE
YDRLHPNENEIINLSKEFNVNGIYIYKKDSFGKDGLLLEARSFNPLSGKLEDRATGSAVISLMYYYRDKYNRIAVKQGIK
GDQCYLESYLNANGKIMLGGKVLLERKNDK
>Mature_270_residues
MNSKLTKYAVFNDVYEKGNIAGVLIGFTIPNDSELIKMAKMNNLPVLLYIQNDNDVFNVSFYNSQRKMNFCGHGVLAASA
FLMDNNHSSILHIQGHAYKVHKDHLMYYMEFNSEIKKDPRPDISHYLDRIFKNTISEWKNISVIDNGNKKLFAEVAKQIE
YDRLHPNENEIINLSKEFNVNGIYIYKKDSFGKDGLLLEARSFNPLSGKLEDRATGSAVISLMYYYRDKYNRIAVKQGIK
GDQCYLESYLNANGKIMLGGKVLLERKNDK

Specific function: Unknown

COG id: COG0384

COG function: function code R; Predicted epimerase, PhzC/PhzF homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31049; Mature: 31049

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSKLTKYAVFNDVYEKGNIAGVLIGFTIPNDSELIKMAKMNNLPVLLYIQNDNDVFNVS
CCCCCCHHHHHHHHHHCCCEEEEEEEEECCCCHHHEEEECCCCCEEEEEEECCCCEEEEE
FYNSQRKMNFCGHGVLAASAFLMDNNHSSILHIQGHAYKVHKDHLMYYMEFNSEIKKDPR
EECCCCEECCCCCHHHHEEEEEEECCCCCEEEEECCEEEEECCEEEEEEEECCHHCCCCC
PDISHYLDRIFKNTISEWKNISVIDNGNKKLFAEVAKQIEYDRLHPNENEIINLSKEFNV
CCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCEEEEEHCCCC
NGIYIYKKDSFGKDGLLLEARSFNPLSGKLEDRATGSAVISLMYYYRDKYNRIAVKQGIK
CEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCC
GDQCYLESYLNANGKIMLGGKVLLERKNDK
CCHHHHHHHHCCCCEEEECCEEEEEECCCC
>Mature Secondary Structure
MNSKLTKYAVFNDVYEKGNIAGVLIGFTIPNDSELIKMAKMNNLPVLLYIQNDNDVFNVS
CCCCCCHHHHHHHHHHCCCEEEEEEEEECCCCHHHEEEECCCCCEEEEEEECCCCEEEEE
FYNSQRKMNFCGHGVLAASAFLMDNNHSSILHIQGHAYKVHKDHLMYYMEFNSEIKKDPR
EECCCCEECCCCCHHHHEEEEEEECCCCCEEEEECCEEEEECCEEEEEEEECCHHCCCCC
PDISHYLDRIFKNTISEWKNISVIDNGNKKLFAEVAKQIEYDRLHPNENEIINLSKEFNV
CCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCEEEEEHCCCC
NGIYIYKKDSFGKDGLLLEARSFNPLSGKLEDRATGSAVISLMYYYRDKYNRIAVKQGIK
CEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCC
GDQCYLESYLNANGKIMLGGKVLLERKNDK
CCHHHHHHHHCCCCEEEECCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA