Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
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Accession | NC_005823 |
Length | 4,277,185 |
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The map label for this gene is 45657005
Identifier: 45657005
GI number: 45657005
Start: 1383576
End: 1384616
Strand: Direct
Name: 45657005
Synonym: LIC11121
Alternate gene names: NA
Gene position: 1383576-1384616 (Clockwise)
Preceding gene: 45657004
Following gene: 45657006
Centisome position: 32.35
GC content: 35.54
Gene sequence:
>1041_bases ATGAGAATATTCTTCAAATTTTTACTCTTACTTTTTTTTCCCATCTCAGTACTGTTTGCGAGTGATTCTGGATGGATAAT CGCGCCTAACGTTCAATATAATCAAGGTAGGTTTATTTTTGAAACTGGTGGAGGTAATCTGATTCCTTCTTCCAATGATC GTAGTTATGGCAGTGGTTCAAGACTGACTTATGCGAGGGAATATCCACTGTTAGGTATTTCTGCGATTTATATCAAAAAG AATTGGGAATTTCAACTCCAAGGAAATTCTACCTTTGGTTATCGAAACTCAGGAAATTTTAGAGACGAAGATTTTTATAT GTTCACGCCTTCGTTTTATTCGAATCGATTTGCACACTACGGTCCAATTTACGGTTACGATCCGATTTGGGGGAAGAATC AACTTACTCGGTTTTCTGGGGCTAGTAATTGGTCCGATTTTGATTCTTCTTTAAAAGCAAATGATTCGATTGCTGGGTTT GACGTAAGATATTTTCCCAGTGGAGGTTCTCCCAATCCGAACGTCAAAGGTTTTGGTCTTTTTGTAATCGGAGGCTATTC TTACGAATATTTAAAATTTATTGTGAACGGATCTTCCGGTTCACAATTGAATTCTGGAAAGATTTATTTGGGTTATCTAA ACGGAGAAAGTATTTCTTATTCGAATTCTATAAACGAAATCAAATACGGTATAGGTACTCAAACTAATTTTCAAAGATGG GGTTTAGAAGTTTCATTCAGTTTTGTTTCCTCGGAGATCAAATCCAGGGACTTTCATCGGTATCGAGCTCTTACTTTTTT AGAATCTGCTTACGGGAAAGGATGGACTCATACGATCAAATTTAACTATAAACTTTCAGAAAATTTAATTTTAAATTTGA ATTGGACGGAATCTTTTAGAGAATTTGAAGGTAAATCGCATGTTAAAGCGGGATTTGGACCTGAATCTTGGTATGCTGAC CTTATATCTTTTAATCAACAGTATTGGCTTTATTCCGTTCAAAACCAAGTATCGCTTGGAGTTTCTGTTCTTCTTTTTTA A
Upstream 100 bases:
>100_bases CCTATGTAGAAACTAAATATACCCCCCTTTCATTGTTGGTAATTGTACTTACTTATACATTGTATTCTCCTAAACTCACG AACGTTTATTGTGAGTTGGA
Downstream 100 bases:
>100_bases ATTCTACTTTAAAATTAAAAAGGTTTTTTAAATCTAAAAGTAATTTTATGTTTTTAGAATGTAGTAACTACTACTTCGAA AAACCTTTTGAAATTCAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MRIFFKFLLLLFFPISVLFASDSGWIIAPNVQYNQGRFIFETGGGNLIPSSNDRSYGSGSRLTYAREYPLLGISAIYIKK NWEFQLQGNSTFGYRNSGNFRDEDFYMFTPSFYSNRFAHYGPIYGYDPIWGKNQLTRFSGASNWSDFDSSLKANDSIAGF DVRYFPSGGSPNPNVKGFGLFVIGGYSYEYLKFIVNGSSGSQLNSGKIYLGYLNGESISYSNSINEIKYGIGTQTNFQRW GLEVSFSFVSSEIKSRDFHRYRALTFLESAYGKGWTHTIKFNYKLSENLILNLNWTESFREFEGKSHVKAGFGPESWYAD LISFNQQYWLYSVQNQVSLGVSVLLF
Sequences:
>Translated_346_residues MRIFFKFLLLLFFPISVLFASDSGWIIAPNVQYNQGRFIFETGGGNLIPSSNDRSYGSGSRLTYAREYPLLGISAIYIKK NWEFQLQGNSTFGYRNSGNFRDEDFYMFTPSFYSNRFAHYGPIYGYDPIWGKNQLTRFSGASNWSDFDSSLKANDSIAGF DVRYFPSGGSPNPNVKGFGLFVIGGYSYEYLKFIVNGSSGSQLNSGKIYLGYLNGESISYSNSINEIKYGIGTQTNFQRW GLEVSFSFVSSEIKSRDFHRYRALTFLESAYGKGWTHTIKFNYKLSENLILNLNWTESFREFEGKSHVKAGFGPESWYAD LISFNQQYWLYSVQNQVSLGVSVLLF >Mature_346_residues MRIFFKFLLLLFFPISVLFASDSGWIIAPNVQYNQGRFIFETGGGNLIPSSNDRSYGSGSRLTYAREYPLLGISAIYIKK NWEFQLQGNSTFGYRNSGNFRDEDFYMFTPSFYSNRFAHYGPIYGYDPIWGKNQLTRFSGASNWSDFDSSLKANDSIAGF DVRYFPSGGSPNPNVKGFGLFVIGGYSYEYLKFIVNGSSGSQLNSGKIYLGYLNGESISYSNSINEIKYGIGTQTNFQRW GLEVSFSFVSSEIKSRDFHRYRALTFLESAYGKGWTHTIKFNYKLSENLILNLNWTESFREFEGKSHVKAGFGPESWYAD LISFNQQYWLYSVQNQVSLGVSVLLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39505; Mature: 39505
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIFFKFLLLLFFPISVLFASDSGWIIAPNVQYNQGRFIFETGGGNLIPSSNDRSYGSGS CCHHHHHHHHHHHHHHEEEECCCCEEEECCCEECCCEEEEECCCCCCCCCCCCCCCCCCC RLTYAREYPLLGISAIYIKKNWEFQLQGNSTFGYRNSGNFRDEDFYMFTPSFYSNRFAHY EEEEEECCCCEEEEEEEEEECEEEEEECCCEECCCCCCCCCCCCEEEECCHHHCCCCCCC GPIYGYDPIWGKNQLTRFSGASNWSDFDSSLKANDSIAGFDVRYFPSGGSPNPNVKGFGL CCCCCCCCCCCCCCEEEECCCCCCCHHCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEE FVIGGYSYEYLKFIVNGSSGSQLNSGKIYLGYLNGESISYSNSINEIKYGIGTQTNFQRW EEECCCCEEEEEEEEECCCCCEECCCEEEEEEECCCCEEECCCCCCEEECCCCCCCHHHC GLEVSFSFVSSEIKSRDFHRYRALTFLESAYGKGWTHTIKFNYKLSENLILNLNWTESFR CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCEEEEEECCHHHH EFEGKSHVKAGFGPESWYADLISFNQQYWLYSVQNQVSLGVSVLLF HCCCCCCEECCCCHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEC >Mature Secondary Structure MRIFFKFLLLLFFPISVLFASDSGWIIAPNVQYNQGRFIFETGGGNLIPSSNDRSYGSGS CCHHHHHHHHHHHHHHEEEECCCCEEEECCCEECCCEEEEECCCCCCCCCCCCCCCCCCC RLTYAREYPLLGISAIYIKKNWEFQLQGNSTFGYRNSGNFRDEDFYMFTPSFYSNRFAHY EEEEEECCCCEEEEEEEEEECEEEEEECCCEECCCCCCCCCCCCEEEECCHHHCCCCCCC GPIYGYDPIWGKNQLTRFSGASNWSDFDSSLKANDSIAGFDVRYFPSGGSPNPNVKGFGL CCCCCCCCCCCCCCEEEECCCCCCCHHCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEE FVIGGYSYEYLKFIVNGSSGSQLNSGKIYLGYLNGESISYSNSINEIKYGIGTQTNFQRW EEECCCCEEEEEEEEECCCCCEECCCEEEEEEECCCCEEECCCCCCEEECCCCCCCHHHC GLEVSFSFVSSEIKSRDFHRYRALTFLESAYGKGWTHTIKFNYKLSENLILNLNWTESFR CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCEEEEEECCHHHH EFEGKSHVKAGFGPESWYADLISFNQQYWLYSVQNQVSLGVSVLLF HCCCCCCEECCCCHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA