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The map label for this gene is oppA

Identifier: 45656899

GI number: 45656899

Start: 1235991

End: 1237790

Strand: Direct

Name: oppA

Synonym: LIC11013

Alternate gene names: 45656899

Gene position: 1235991-1237790 (Clockwise)

Preceding gene: 45656898

Following gene: 45656900

Centisome position: 28.9

GC content: 35.0

Gene sequence:

>1800_bases
TTGAAGAAAATATTATATTCTGTTTTTTGTATTTTGTTTTTTTGTCTTCTTCCCGTTAATTGTGGGGATAAAGAAGAAGT
CGAGTCCGTTGTAGTTGAAACCCTTCCTTGGAAGGGAAATCCAGATTCTATCCCTTTGGCTCTAAGAACTCAAAATCCTA
TCGTTTCACCGGACGCTAAAAAAGGCGGGACGTTTCGTATTTACAGTAATCAATTTCCTAAATCCTTAAATTATTATTTG
GATCAGTTTTCTACTACGGCTCACATATTTGGTCTGATGTTTGAGCCTCTTTTGGATTATCACCCAATTACTTTGGATCC
AATTCCACACCTTGCTTCTTCTTGGAAAATTTCTCCAGATAAAAAGAAATTTACTTTTAAGATTGATGAAAACGCGTTTT
GGTCGGACGGCAAACCGGTTACTGCGAATGACGTTTTATTTACCTACGAAACCTTGATGGATAAAAATAATAATACTGCG
GTTTTTAGAATCGATCTTTCTCGTTTTGAAAAACCGGTTGTTTTAAACGAAAGGGAAATTGAATTTACTCAAAAAGAAAT
TCACTGGTCTAACTTCAACACAGTCGCAAATTCTTTGTATATTCTTCCTGCTCATTATTATAAAGATAGAAATTTCGATA
AGGAGAATTTTGATTTTCCGATCGTATCAGGTCCTTATTCCATGCTTTCTGCTAAAAAAGGCCGTTATGTGAAGATGAGA
AGAAGGGGTGATTATTGGATGAGAGCTTATCCTTTTTATAAAGGAACGGATAATTTTGACACCATTCTATTCAAAGTTTA
TAATGAAGAGCCAATCGCCTTTCAAGCATTCAAAAAAGGTGATATAGATATTTATCCAACTTATACTGCTTCTTTTTGGG
TAAAAGAAGCAGTGGGCGAAAAGTTTGACGAGAATTATATCCTCAAACAAAAGATTTATAATTCCAAACCGATCGGTTTT
CAAGGTTTGGTTTTTAATATAAGAAGAGGAATTTTTTCGGATGTTAGAGTCCGAAAGGCATTTGCTCATTTAGTGGATCG
GAAACTTCTCGTCGAAAAATTGGCTTATAACGAATACGAACTGACAAACTCATTTTATCAGGATCTATGGCCTACAAATT
TTTCTCCTAATCCTCCGATCGATTTTGACGTAAAGAAGGCAAGAGAATTACTTTCGGAAGCGGGATGGAAAACGAACTCG
AAAGGTATTTTAGAAAAAGATGGAAAAGAATTTAGATTCACTATTTTAGAAAGGGATAAGAAGTCTGAGAAATATCTGAC
TCCTATTCAAGAAAGGGCTAAGGAAGTTGGGATTATAATCAATTTAGAATCCACGGATCTTGCAGAGTGGAGTTCTAGAA
TGGATAAATATGACTTTGATATGACTTGGGCTGCTTGGGGTGGAGGTGTTTTTAAAGATCCAGAAGCTATGTGGTATTCT
AAATACGCGGATGAAAAAGGACAACCGAATCTTTCTGGTTTTAAAAACTCAGAAGTAGACAAGTTGATTGAACAACAAAG
GGCTGAATTTAGTGTTCCAAAGAGAAATGAGATTCTTAAAAAGATAGATAAGATATTAACCGCAGAAGTTCCATATGTAC
TTTTATGGAATACGAGTGCGACTAGAATTATGTATTGGAATCGTTTTCAATTTCCTAAAAATCCTCTTGGAAAATACGGA
AGTGAAAAAGAAGCTTCTTCTCTTTGGTGGCTGGATGAAGAACGATCTTCTAAATTAAACGACTCTATTTTAAAAAAGGA
AAAGTTACCTTCGGTTCCGGATAAAGTTTACTTTCAATAG

Upstream 100 bases:

>100_bases
GTAGAACATTTGGATCAACTCAAAGAGATTTTAAGTAATCTCAAACAAATTCCGGATGTATATCAAGCGCATAGAATTAA
AAATTAAAAGAGGTAATTAC

Downstream 100 bases:

>100_bases
ATTCAAATTTATGAATAAACGGAATCGACTTGGAGAATTAAGTGGTGTTATACGGGATTTTTTAATTTCTCCTAAGATTC
CAAACTTTATCGAACTTTTA

Product: hypothetical protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 599; Mature: 599

Protein sequence:

>599_residues
MKKILYSVFCILFFCLLPVNCGDKEEVESVVVETLPWKGNPDSIPLALRTQNPIVSPDAKKGGTFRIYSNQFPKSLNYYL
DQFSTTAHIFGLMFEPLLDYHPITLDPIPHLASSWKISPDKKKFTFKIDENAFWSDGKPVTANDVLFTYETLMDKNNNTA
VFRIDLSRFEKPVVLNEREIEFTQKEIHWSNFNTVANSLYILPAHYYKDRNFDKENFDFPIVSGPYSMLSAKKGRYVKMR
RRGDYWMRAYPFYKGTDNFDTILFKVYNEEPIAFQAFKKGDIDIYPTYTASFWVKEAVGEKFDENYILKQKIYNSKPIGF
QGLVFNIRRGIFSDVRVRKAFAHLVDRKLLVEKLAYNEYELTNSFYQDLWPTNFSPNPPIDFDVKKARELLSEAGWKTNS
KGILEKDGKEFRFTILERDKKSEKYLTPIQERAKEVGIIINLESTDLAEWSSRMDKYDFDMTWAAWGGGVFKDPEAMWYS
KYADEKGQPNLSGFKNSEVDKLIEQQRAEFSVPKRNEILKKIDKILTAEVPYVLLWNTSATRIMYWNRFQFPKNPLGKYG
SEKEASSLWWLDEERSSKLNDSILKKEKLPSVPDKVYFQ

Sequences:

>Translated_599_residues
MKKILYSVFCILFFCLLPVNCGDKEEVESVVVETLPWKGNPDSIPLALRTQNPIVSPDAKKGGTFRIYSNQFPKSLNYYL
DQFSTTAHIFGLMFEPLLDYHPITLDPIPHLASSWKISPDKKKFTFKIDENAFWSDGKPVTANDVLFTYETLMDKNNNTA
VFRIDLSRFEKPVVLNEREIEFTQKEIHWSNFNTVANSLYILPAHYYKDRNFDKENFDFPIVSGPYSMLSAKKGRYVKMR
RRGDYWMRAYPFYKGTDNFDTILFKVYNEEPIAFQAFKKGDIDIYPTYTASFWVKEAVGEKFDENYILKQKIYNSKPIGF
QGLVFNIRRGIFSDVRVRKAFAHLVDRKLLVEKLAYNEYELTNSFYQDLWPTNFSPNPPIDFDVKKARELLSEAGWKTNS
KGILEKDGKEFRFTILERDKKSEKYLTPIQERAKEVGIIINLESTDLAEWSSRMDKYDFDMTWAAWGGGVFKDPEAMWYS
KYADEKGQPNLSGFKNSEVDKLIEQQRAEFSVPKRNEILKKIDKILTAEVPYVLLWNTSATRIMYWNRFQFPKNPLGKYG
SEKEASSLWWLDEERSSKLNDSILKKEKLPSVPDKVYFQ
>Mature_599_residues
MKKILYSVFCILFFCLLPVNCGDKEEVESVVVETLPWKGNPDSIPLALRTQNPIVSPDAKKGGTFRIYSNQFPKSLNYYL
DQFSTTAHIFGLMFEPLLDYHPITLDPIPHLASSWKISPDKKKFTFKIDENAFWSDGKPVTANDVLFTYETLMDKNNNTA
VFRIDLSRFEKPVVLNEREIEFTQKEIHWSNFNTVANSLYILPAHYYKDRNFDKENFDFPIVSGPYSMLSAKKGRYVKMR
RRGDYWMRAYPFYKGTDNFDTILFKVYNEEPIAFQAFKKGDIDIYPTYTASFWVKEAVGEKFDENYILKQKIYNSKPIGF
QGLVFNIRRGIFSDVRVRKAFAHLVDRKLLVEKLAYNEYELTNSFYQDLWPTNFSPNPPIDFDVKKARELLSEAGWKTNS
KGILEKDGKEFRFTILERDKKSEKYLTPIQERAKEVGIIINLESTDLAEWSSRMDKYDFDMTWAAWGGGVFKDPEAMWYS
KYADEKGQPNLSGFKNSEVDKLIEQQRAEFSVPKRNEILKKIDKILTAEVPYVLLWNTSATRIMYWNRFQFPKNPLGKYG
SEKEASSLWWLDEERSSKLNDSILKKEKLPSVPDKVYFQ

Specific function: Unknown

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI87082063, Length=567, Percent_Identity=26.984126984127, Blast_Score=169, Evalue=3e-43,
Organism=Escherichia coli, GI1789887, Length=454, Percent_Identity=23.7885462555066, Blast_Score=97, Evalue=4e-21,
Organism=Escherichia coli, GI87081878, Length=462, Percent_Identity=24.2424242424242, Blast_Score=94, Evalue=3e-20,
Organism=Escherichia coli, GI1787762, Length=463, Percent_Identity=26.5658747300216, Blast_Score=89, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 70147; Mature: 70147

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILYSVFCILFFCLLPVNCGDKEEVESVVVETLPWKGNPDSIPLALRTQNPIVSPDAK
CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCC
KGGTFRIYSNQFPKSLNYYLDQFSTTAHIFGLMFEPLLDYHPITLDPIPHLASSWKISPD
CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHCCCCCCC
KKKFTFKIDENAFWSDGKPVTANDVLFTYETLMDKNNNTAVFRIDLSRFEKPVVLNEREI
CCEEEEEECCCCCCCCCCCCCCCCEEEEEHHHHCCCCCEEEEEEEHHHCCCCEEECCCCC
EFTQKEIHWSNFNTVANSLYILPAHYYKDRNFDKENFDFPIVSGPYSMLSAKKGRYVKMR
CHHHHHHCCCCHHHHHCEEEEEEHHHHCCCCCCCCCCCCCEECCCHHHHHCCCCCEEEEE
RRGDYWMRAYPFYKGTDNFDTILFKVYNEEPIAFQAFKKGDIDIYPTYTASFWVKEAVGE
ECCCEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEECCCCEEEEECCHHHHHHHHHHCC
KFDENYILKQKIYNSKPIGFQGLVFNIRRGIFSDVRVRKAFAHLVDRKLLVEKLAYNEYE
CCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LTNSFYQDLWPTNFSPNPPIDFDVKKARELLSEAGWKTNSKGILEKDGKEFRFTILERDK
HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCC
KSEKYLTPIQERAKEVGIIINLESTDLAEWSSRMDKYDFDMTWAAWGGGVFKDPEAMWYS
CCCHHCCHHHHHHHHCCEEEEECCCCHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHH
KYADEKGQPNLSGFKNSEVDKLIEQQRAEFSVPKRNEILKKIDKILTAEVPYVLLWNTSA
HHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC
TRIMYWNRFQFPKNPLGKYGSEKEASSLWWLDEERSSKLNDSILKKEKLPSVPDKVYFQ
CEEEEEECCCCCCCCHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKKILYSVFCILFFCLLPVNCGDKEEVESVVVETLPWKGNPDSIPLALRTQNPIVSPDAK
CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCC
KGGTFRIYSNQFPKSLNYYLDQFSTTAHIFGLMFEPLLDYHPITLDPIPHLASSWKISPD
CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHCCCCCCC
KKKFTFKIDENAFWSDGKPVTANDVLFTYETLMDKNNNTAVFRIDLSRFEKPVVLNEREI
CCEEEEEECCCCCCCCCCCCCCCCEEEEEHHHHCCCCCEEEEEEEHHHCCCCEEECCCCC
EFTQKEIHWSNFNTVANSLYILPAHYYKDRNFDKENFDFPIVSGPYSMLSAKKGRYVKMR
CHHHHHHCCCCHHHHHCEEEEEEHHHHCCCCCCCCCCCCCEECCCHHHHHCCCCCEEEEE
RRGDYWMRAYPFYKGTDNFDTILFKVYNEEPIAFQAFKKGDIDIYPTYTASFWVKEAVGE
ECCCEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEECCCCEEEEECCHHHHHHHHHHCC
KFDENYILKQKIYNSKPIGFQGLVFNIRRGIFSDVRVRKAFAHLVDRKLLVEKLAYNEYE
CCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LTNSFYQDLWPTNFSPNPPIDFDVKKARELLSEAGWKTNSKGILEKDGKEFRFTILERDK
HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCC
KSEKYLTPIQERAKEVGIIINLESTDLAEWSSRMDKYDFDMTWAAWGGGVFKDPEAMWYS
CCCHHCCHHHHHHHHCCEEEEECCCCHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHH
KYADEKGQPNLSGFKNSEVDKLIEQQRAEFSVPKRNEILKKIDKILTAEVPYVLLWNTSA
HHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC
TRIMYWNRFQFPKNPLGKYGSEKEASSLWWLDEERSSKLNDSILKKEKLPSVPDKVYFQ
CEEEEEECCCCCCCCHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA