Click here to switch to the map view.

The map label for this gene is 45656774

Identifier: 45656774

GI number: 45656774

Start: 1069164

End: 1069778

Strand: Direct

Name: 45656774

Synonym: LIC10883

Alternate gene names: NA

Gene position: 1069164-1069778 (Clockwise)

Preceding gene: 45656773

Following gene: 45656775

Centisome position: 25.0

GC content: 38.54

Gene sequence:

>615_bases
ATGGGTCAAAAGAAAAGTCACCTACCTGAGACTAGAAATCCAGTCGAATTGATGGAATTTCTCTCGAAAGAAATGGAAAA
CCCTTCTTTTGATGAATGGCTTTCTGAACTTGCAGATAAGGCGATCGAAAACGATAAATTCGTTTGGAGCTTTTTATATC
AAGTGATGCGTGACGTGGATTCGGGTAGGCTTTCATGGGGGTATCACAAACGATTGCTTTCCGGCGTTGTTCAAATTCTT
TCCAGGGTGGGGGACAGTCGTGCCTATCGTGTAATCATCAATTATGTCAAATCTCTGGATCGTCAAATTCCGATCGGAGC
ATTGGAATTAATTAGTGATTTGTTGCCTTCGTTTTCGGAAGTAGATTTAGATGAGATTTTAAAAATTGCAGCTCATCAGG
ATTCACTTAAATCCGCGTTTGGAATTTTAGCAATTTTGCAACTGATTGTTCAAGGAAAACTTCCGACGGAAAAGGTGGAA
GAGACAAAATTGTTTCTTAAAAATTATAAAAACTATGTTTATTATTTAGATTCGGCGATAGAACAGTCTTTGGATTATCT
GGAAGCACAAGAGGAACCCAATCTGCTTACTTTCTTCAACGAAATCGCAGTATGA

Upstream 100 bases:

>100_bases
TTTAAAATAAACTAAAAATTCTCTAAAAAAACTACGTTCTTGGTTATCTAAAAGAAAAAGAATGGAAAATGATTCTACCT
TAGAGGATAATCGTTAACCT

Downstream 100 bases:

>100_bases
GTCCCGATTTTATAGCTAAATTTTAAAGTTTGCAGGAACTCCCACAAACTTCTTATCGTACATTTTGCAATTTGTCAGAA
ATTTTAGGCTTTTAAAAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MGQKKSHLPETRNPVELMEFLSKEMENPSFDEWLSELADKAIENDKFVWSFLYQVMRDVDSGRLSWGYHKRLLSGVVQIL
SRVGDSRAYRVIINYVKSLDRQIPIGALELISDLLPSFSEVDLDEILKIAAHQDSLKSAFGILAILQLIVQGKLPTEKVE
ETKLFLKNYKNYVYYLDSAIEQSLDYLEAQEEPNLLTFFNEIAV

Sequences:

>Translated_204_residues
MGQKKSHLPETRNPVELMEFLSKEMENPSFDEWLSELADKAIENDKFVWSFLYQVMRDVDSGRLSWGYHKRLLSGVVQIL
SRVGDSRAYRVIINYVKSLDRQIPIGALELISDLLPSFSEVDLDEILKIAAHQDSLKSAFGILAILQLIVQGKLPTEKVE
ETKLFLKNYKNYVYYLDSAIEQSLDYLEAQEEPNLLTFFNEIAV
>Mature_203_residues
GQKKSHLPETRNPVELMEFLSKEMENPSFDEWLSELADKAIENDKFVWSFLYQVMRDVDSGRLSWGYHKRLLSGVVQILS
RVGDSRAYRVIINYVKSLDRQIPIGALELISDLLPSFSEVDLDEILKIAAHQDSLKSAFGILAILQLIVQGKLPTEKVEE
TKLFLKNYKNYVYYLDSAIEQSLDYLEAQEEPNLLTFFNEIAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23509; Mature: 23378

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQKKSHLPETRNPVELMEFLSKEMENPSFDEWLSELADKAIENDKFVWSFLYQVMRDVD
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
SGRLSWGYHKRLLSGVVQILSRVGDSRAYRVIINYVKSLDRQIPIGALELISDLLPSFSE
CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCC
VDLDEILKIAAHQDSLKSAFGILAILQLIVQGKLPTEKVEETKLFLKNYKNYVYYLDSAI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EQSLDYLEAQEEPNLLTFFNEIAV
HHHHHHHHHCCCCCHHHHHHHHCC
>Mature Secondary Structure 
GQKKSHLPETRNPVELMEFLSKEMENPSFDEWLSELADKAIENDKFVWSFLYQVMRDVD
CCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
SGRLSWGYHKRLLSGVVQILSRVGDSRAYRVIINYVKSLDRQIPIGALELISDLLPSFSE
CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCC
VDLDEILKIAAHQDSLKSAFGILAILQLIVQGKLPTEKVEETKLFLKNYKNYVYYLDSAI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EQSLDYLEAQEEPNLLTFFNEIAV
HHHHHHHHHCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA