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The map label for this gene is 45656428

Identifier: 45656428

GI number: 45656428

Start: 642231

End: 642731

Strand: Reverse

Name: 45656428

Synonym: LIC10530

Alternate gene names: NA

Gene position: 642731-642231 (Counterclockwise)

Preceding gene: 45656429

Following gene: 45656425

Centisome position: 15.03

GC content: 33.93

Gene sequence:

>501_bases
ATGACTATGTCTGCGTTAGTTCAAAAGGTTCCTAAACGTTTAGGTGAACTTTTAGGTCCAGAAGGAACTGTAGAGTTTGT
AGATTTTCTAAATCGTGCTTTTGGAGATAATAATTCAACTGCAATTGATATTGTTACCGATCGTTTTGAACGTCGCCTTC
TCGAGGAAGGTAGTAAACTTCGTTCTGAAATTTCGGAGCTAAAAGCTGAATTTCGATTTGAGTTTTCAAAGTTTAGATCA
GAATTTACTGATCTAAAAACAGAATTTACCGATCTAAGAACAGAGTTTACTGATCTAAGAACAGAGTTTACTGATCTAAG
AACAGAGTTTACTAATTTAAAAACAGAATTTGCCAACTTAAAAACGGATTTCGCCGATCATAGGGCGGATATTAAATCCG
AAGTTGTGGAAATTCATAAATCCATATCATTGCAAACAAAATGGATTTTAGGTGTTGTGATTGGTACGATTGGAGTATTT
TCGATAATCGTAAAATTCTAA

Upstream 100 bases:

>100_bases
AGAAAAAAATCAAAAATCGAAATCCAATCAATCGATTCCTGGAACCGTTTTAATTAAGGCAATTTTGTGCTTGCCTATTT
TTTTTTGAAGGAGTAGTTTT

Downstream 100 bases:

>100_bases
TATTTTTAAATTTCTATCTTTTATTCAATCTTGTGAATCCAAAATTTATTTTTTTATCTCAGAATTTGTTTTAAAGTATT
AACTGGGAATTGCATAATAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MTMSALVQKVPKRLGELLGPEGTVEFVDFLNRAFGDNNSTAIDIVTDRFERRLLEEGSKLRSEISELKAEFRFEFSKFRS
EFTDLKTEFTDLRTEFTDLRTEFTDLRTEFTNLKTEFANLKTDFADHRADIKSEVVEIHKSISLQTKWILGVVIGTIGVF
SIIVKF

Sequences:

>Translated_166_residues
MTMSALVQKVPKRLGELLGPEGTVEFVDFLNRAFGDNNSTAIDIVTDRFERRLLEEGSKLRSEISELKAEFRFEFSKFRS
EFTDLKTEFTDLRTEFTDLRTEFTDLRTEFTNLKTEFANLKTDFADHRADIKSEVVEIHKSISLQTKWILGVVIGTIGVF
SIIVKF
>Mature_165_residues
TMSALVQKVPKRLGELLGPEGTVEFVDFLNRAFGDNNSTAIDIVTDRFERRLLEEGSKLRSEISELKAEFRFEFSKFRSE
FTDLKTEFTDLRTEFTDLRTEFTDLRTEFTNLKTEFANLKTDFADHRADIKSEVVEIHKSISLQTKWILGVVIGTIGVFS
IIVKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19156; Mature: 19025

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMSALVQKVPKRLGELLGPEGTVEFVDFLNRAFGDNNSTAIDIVTDRFERRLLEEGSKL
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
RSEISELKAEFRFEFSKFRSEFTDLKTEFTDLRTEFTDLRTEFTDLRTEFTNLKTEFANL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTDFADHRADIKSEVVEIHKSISLQTKWILGVVIGTIGVFSIIVKF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TMSALVQKVPKRLGELLGPEGTVEFVDFLNRAFGDNNSTAIDIVTDRFERRLLEEGSKL
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
RSEISELKAEFRFEFSKFRSEFTDLKTEFTDLRTEFTDLRTEFTDLRTEFTNLKTEFANL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTDFADHRADIKSEVVEIHKSISLQTKWILGVVIGTIGVFSIIVKF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA