Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
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Accession | NC_005823 |
Length | 4,277,185 |
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The map label for this gene is 45656307
Identifier: 45656307
GI number: 45656307
Start: 464770
End: 465624
Strand: Reverse
Name: 45656307
Synonym: LIC10407
Alternate gene names: NA
Gene position: 465624-464770 (Counterclockwise)
Preceding gene: 45656308
Following gene: 45656302
Centisome position: 10.89
GC content: 31.11
Gene sequence:
>855_bases ATGCACCTTTATATCTTTCCAGTTATAGCGACCATTTTCTTTTTTGTTTCTAGTTCTTTGTTTGGTGAAAATTTAAAACT AGATTTAGAACAAACGAACGAAATTCTAAAACATATTCAAAAAGATCATAGAATCGGTTGGGAAAATCTAGAAACTCAAA TCGATTTCAATCTTCTCAAAGACAAGATCAATAAAGGATCTAAATCAGAAGTTTTAAAAATATTTAACGAAATCAAACAA ACCAATCGTCTCAAAAACCTTCATCAAGTCGATTTCAATCAAGATGGTAAATTGGATTTAATTTATGATCCTGAAAATCC TACTCAAGATTTTGTACTAATTTTTTTAAACACTTCGAAGGGTTACAAATTGCTCTATAATCGCGGTGGAATGATCGTGG ATTTTAAACGTTCTCAAAAATTTGTAACATTTTATATAAAAGCTCCTTCTTGTTGTTGTCTTCAATATGGTTCTTTAGAA ATTCTTAATTTTGATTTCGACTCCAATCAACTTAAAAGCCAAATATCCGTTTCTTATTCTGGAGTTTTACATCAGCCTAC ACAACTCGAATATTTCAAACGTTTTAAAGTTTCTAAAAATTCAGCGAAACTAAGAACGGCTTCGGTAATCGACGACAAAG AAATTCCGGACCCTTGTTCGGATCAAAAAATTCAGGGGAATAGGATCGATTTATACAATACAAATTTTGAAGGTTTTGCA CTTTCAAACAAATTGAACGAAAAACAGATGCCTGATTGGTATTTCGTTTTGATTCCCTCCCCTTACATAAAAGATAAGGT CTATAACTTAGGCTGGTTTCAAAAACAGGATTTAGAATTGATAGACACAAAATAA
Upstream 100 bases:
>100_bases TAAAATTTAGTTTTTAGTTACCGAACGATTTTTAATTAATTTCGTTTTATCCTTTCAAACAGTTTAAAAAATGTACAAAT TCTATCACAAAGAGATTTGA
Downstream 100 bases:
>100_bases ATTGGCTTTAACTATAAACCTTATATCAAGATGAATTTGGCGGTTGAAAATAGGAGCGAATCCCGCCAATAATTTGTAAA AGAAAGATCAAATGGAATAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MHLYIFPVIATIFFFVSSSLFGENLKLDLEQTNEILKHIQKDHRIGWENLETQIDFNLLKDKINKGSKSEVLKIFNEIKQ TNRLKNLHQVDFNQDGKLDLIYDPENPTQDFVLIFLNTSKGYKLLYNRGGMIVDFKRSQKFVTFYIKAPSCCCLQYGSLE ILNFDFDSNQLKSQISVSYSGVLHQPTQLEYFKRFKVSKNSAKLRTASVIDDKEIPDPCSDQKIQGNRIDLYNTNFEGFA LSNKLNEKQMPDWYFVLIPSPYIKDKVYNLGWFQKQDLELIDTK
Sequences:
>Translated_284_residues MHLYIFPVIATIFFFVSSSLFGENLKLDLEQTNEILKHIQKDHRIGWENLETQIDFNLLKDKINKGSKSEVLKIFNEIKQ TNRLKNLHQVDFNQDGKLDLIYDPENPTQDFVLIFLNTSKGYKLLYNRGGMIVDFKRSQKFVTFYIKAPSCCCLQYGSLE ILNFDFDSNQLKSQISVSYSGVLHQPTQLEYFKRFKVSKNSAKLRTASVIDDKEIPDPCSDQKIQGNRIDLYNTNFEGFA LSNKLNEKQMPDWYFVLIPSPYIKDKVYNLGWFQKQDLELIDTK >Mature_284_residues MHLYIFPVIATIFFFVSSSLFGENLKLDLEQTNEILKHIQKDHRIGWENLETQIDFNLLKDKINKGSKSEVLKIFNEIKQ TNRLKNLHQVDFNQDGKLDLIYDPENPTQDFVLIFLNTSKGYKLLYNRGGMIVDFKRSQKFVTFYIKAPSCCCLQYGSLE ILNFDFDSNQLKSQISVSYSGVLHQPTQLEYFKRFKVSKNSAKLRTASVIDDKEIPDPCSDQKIQGNRIDLYNTNFEGFA LSNKLNEKQMPDWYFVLIPSPYIKDKVYNLGWFQKQDLELIDTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33232; Mature: 33232
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLYIFPVIATIFFFVSSSLFGENLKLDLEQTNEILKHIQKDHRIGWENLETQIDFNLLK CEEEEHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHH DKINKGSKSEVLKIFNEIKQTNRLKNLHQVDFNQDGKLDLIYDPENPTQDFVLIFLNTSK HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEEEEECCC GYKLLYNRGGMIVDFKRSQKFVTFYIKAPSCCCLQYGSLEILNFDFDSNQLKSQISVSYS CEEEEEECCCEEEEEECCCEEEEEEEECCCEEEEECCCEEEEEECCCCHHHHHHHEEEEC GVLHQPTQLEYFKRFKVSKNSAKLRTASVIDDKEIPDPCSDQKIQGNRIDLYNTNFEGFA CEECCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCEE LSNKLNEKQMPDWYFVLIPSPYIKDKVYNLGWFQKQDLELIDTK ECCCCCCCCCCCEEEEEECCCHHHHHHCCCCCCCCCCCEEECCC >Mature Secondary Structure MHLYIFPVIATIFFFVSSSLFGENLKLDLEQTNEILKHIQKDHRIGWENLETQIDFNLLK CEEEEHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHH DKINKGSKSEVLKIFNEIKQTNRLKNLHQVDFNQDGKLDLIYDPENPTQDFVLIFLNTSK HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEEEEECCC GYKLLYNRGGMIVDFKRSQKFVTFYIKAPSCCCLQYGSLEILNFDFDSNQLKSQISVSYS CEEEEEECCCEEEEEECCCEEEEEEEECCCEEEEECCCEEEEEECCCCHHHHHHHEEEEC GVLHQPTQLEYFKRFKVSKNSAKLRTASVIDDKEIPDPCSDQKIQGNRIDLYNTNFEGFA CEECCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCEE LSNKLNEKQMPDWYFVLIPSPYIKDKVYNLGWFQKQDLELIDTK ECCCCCCCCCCCEEEEEECCCHHHHHHCCCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA