Click here to switch to the map view.

The map label for this gene is 45656135

Identifier: 45656135

GI number: 45656135

Start: 265193

End: 266197

Strand: Reverse

Name: 45656135

Synonym: LIC10230

Alternate gene names: NA

Gene position: 266197-265193 (Counterclockwise)

Preceding gene: 45656136

Following gene: 45656129

Centisome position: 6.22

GC content: 32.24

Gene sequence:

>1005_bases
ATGAAAACTAAACTCGCGAAAATCATTCCTTTTATTATTTTATCTTTTTGTTTAATGAATGTTTCCTTTGAACCAATCTT
TTATGATCCCAAGGATGTGGATTCTATGGAAGCGCTTTTAGAAGGTTCTGGAAGAGAACACGCAGCTCAATGGGGAATCG
AGAGGGGATTAATTTCAAAAATCCAACTTACTTCTAAAGTTATGGAAGAGTTAAACGAAAAAACAATTCCATCCGATGCA
CAATTAGAAGCGACCGTAGATAGAATAAGCCGAATTTTGCTCGGACAAAAAATTATGTTATTTATTTATGGATTTCTAAT
ATTTCTATCGGTAACCTCTTTTTTAGCACTTCATCATAAAGCTTGGTTTTATACATATTTAAATAGAAGTTTGTATTTGA
TCTCCGTTCTTCCCATTTTAATGTCTCTCCAATATCCATTGAAAAGTATTCCTCAAACTCCAATTGTCGGAACCATATCT
TCTTTATTTTTGTTCGTATTAACGGTCCTATTGATTTATATGTTTTTTACGATTTCAAAAGTTTACGAAAACCAAGCAGA
TCGATTTGCTGTTTTTCAAACGGCGCAAAACGGAGAAGAGGGAGAGTTTCAATCCGCTTCTTCTTCAAAAATTTCATGGA
TACCCATGTTGTTTCATTTCAGCGGAATTATGATTACAGGAATTTTATTAGGAAATTTAATTTACATTCCTATCTTTCTT
CTGCAGAAACATTATTCATTCGAGTTCGGAATTCTATTGATCGTTTTACTTCTACTAATGATGACTTTTTATATTCGAAA
TTATTTTAGAATGGGAAAAAACGAAGAACTAACCTCGACTGGAAATATTACTTTATCTGTAAGTTATCTTCAATTTAGAA
TAATTCGAAATACGATTTTTATCGTGTTTGCGGTGTTAGGGGTTACACTTTTTGTGGTTTTACTTTTTACGATCTTATCA
ATGAACACTTGGATCTTAGACCTAGCTTCTAGAAGAGGCTTATAA

Upstream 100 bases:

>100_bases
AGAAGACTCAGGATTGATGATTACGATCTTGATTGCTTTAGGAATATTAGGAATTTCAATGACTGCAATTTTTTCATTTC
TTTTTTAATAAAACCAAACT

Downstream 100 bases:

>100_bases
TCTCTTCAAAAGTCATCTCAAGAAACTTTTGAGATAATTTTTAAGAAAACGTAATTTTATAAAGATCTTGTCCCAAAACT
TCAAAGAATTTTACGAGATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MKTKLAKIIPFIILSFCLMNVSFEPIFYDPKDVDSMEALLEGSGREHAAQWGIERGLISKIQLTSKVMEELNEKTIPSDA
QLEATVDRISRILLGQKIMLFIYGFLIFLSVTSFLALHHKAWFYTYLNRSLYLISVLPILMSLQYPLKSIPQTPIVGTIS
SLFLFVLTVLLIYMFFTISKVYENQADRFAVFQTAQNGEEGEFQSASSSKISWIPMLFHFSGIMITGILLGNLIYIPIFL
LQKHYSFEFGILLIVLLLLMMTFYIRNYFRMGKNEELTSTGNITLSVSYLQFRIIRNTIFIVFAVLGVTLFVVLLFTILS
MNTWILDLASRRGL

Sequences:

>Translated_334_residues
MKTKLAKIIPFIILSFCLMNVSFEPIFYDPKDVDSMEALLEGSGREHAAQWGIERGLISKIQLTSKVMEELNEKTIPSDA
QLEATVDRISRILLGQKIMLFIYGFLIFLSVTSFLALHHKAWFYTYLNRSLYLISVLPILMSLQYPLKSIPQTPIVGTIS
SLFLFVLTVLLIYMFFTISKVYENQADRFAVFQTAQNGEEGEFQSASSSKISWIPMLFHFSGIMITGILLGNLIYIPIFL
LQKHYSFEFGILLIVLLLLMMTFYIRNYFRMGKNEELTSTGNITLSVSYLQFRIIRNTIFIVFAVLGVTLFVVLLFTILS
MNTWILDLASRRGL
>Mature_334_residues
MKTKLAKIIPFIILSFCLMNVSFEPIFYDPKDVDSMEALLEGSGREHAAQWGIERGLISKIQLTSKVMEELNEKTIPSDA
QLEATVDRISRILLGQKIMLFIYGFLIFLSVTSFLALHHKAWFYTYLNRSLYLISVLPILMSLQYPLKSIPQTPIVGTIS
SLFLFVLTVLLIYMFFTISKVYENQADRFAVFQTAQNGEEGEFQSASSSKISWIPMLFHFSGIMITGILLGNLIYIPIFL
LQKHYSFEFGILLIVLLLLMMTFYIRNYFRMGKNEELTSTGNITLSVSYLQFRIIRNTIFIVFAVLGVTLFVVLLFTILS
MNTWILDLASRRGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38285; Mature: 38285

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA