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The map label for this gene is cbiQ

Identifier: 45359046

GI number: 45359046

Start: 1443190

End: 1443963

Strand: Direct

Name: cbiQ

Synonym: MMP1483

Alternate gene names: NA

Gene position: 1443190-1443963 (Clockwise)

Preceding gene: 45359045

Following gene: 45359047

Centisome position: 86.88

GC content: 29.72

Gene sequence:

>774_bases
ATGACGAACAGCACTTTAATTGATAACATTGCAAACTATAACAAGTTAAGGTCAGTTAATCCTACTTTAAAAGTTATTTT
TGCAATTTCTTCACTGTTCGTTAGCATTTTTTCTAAAAATTTTATTGTACCTCTTTTAATCACAATTATAATGAGTTTTG
TGATTATTTTTGCTGCAAAGATACCTAAAAATATTTACGGAAAATTACTGGCAATCCCGATTTTTTTTGGAATTATTACG
TTTTTAATGATGACTTTTTTATTTGGAACTGATATCTACACGTCATTTGATTTTTTTGGAATTACAATCAATTTACTAAA
AGACGGATTTAGTCTTGGACTTTTAACATTTTTTAAAATGCTTGGCGGGGTATCCTGCACTCTATTTTTAGCACTTACAA
CACCATTCACTGAACTATTTTACATCCTTAAAAGATCTAAAATGCCAAAAAACATGCTTGAAATTGCTATGATGATGTAT
CGATATATCTTCATGCTTTTAGAAGAAGCTTTAACAATGGAGAACTCGCAAAAAACAAGGCTTGGCTACAAAAATCTTAA
AACTTCGTACCACTCATTGGGGCTATTAACGGGAAGTCTGTTTATAAAAGCACTTGATAAGGGAGATATAATTTATAATT
CACTTAATTCAAGAGGATACGACGGAAATCTAATGTTTTTTGGGGATATTGCCTATCCAAGAACTTTTTCTATTGTACTT
TTAGGAGCATTTGAATTGATGTTGCTATCATTAAATTACATTACGATATTTTAA

Upstream 100 bases:

>100_bases
TATTTGCGCTTCAAGCTGCAATAGGTGCAATAATCATAGGATACTTCTTTGGATACAACAAAGCCAAATATGATGCCAAA
AACCAGTAAAAGGTTAAAAA

Downstream 100 bases:

>100_bases
AGCCAAAAATTAAATTCTAACTTTTTTATACCTTTAAGCATATAGTTCCTCCAAGGTGATTTAATGGCGATTTTGGAAAC
AAGAGATTTAAAGTATTCGT

Product: cobalt ABC transporter inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MTNSTLIDNIANYNKLRSVNPTLKVIFAISSLFVSIFSKNFIVPLLITIIMSFVIIFAAKIPKNIYGKLLAIPIFFGIIT
FLMMTFLFGTDIYTSFDFFGITINLLKDGFSLGLLTFFKMLGGVSCTLFLALTTPFTELFYILKRSKMPKNMLEIAMMMY
RYIFMLLEEALTMENSQKTRLGYKNLKTSYHSLGLLTGSLFIKALDKGDIIYNSLNSRGYDGNLMFFGDIAYPRTFSIVL
LGAFELMLLSLNYITIF

Sequences:

>Translated_257_residues
MTNSTLIDNIANYNKLRSVNPTLKVIFAISSLFVSIFSKNFIVPLLITIIMSFVIIFAAKIPKNIYGKLLAIPIFFGIIT
FLMMTFLFGTDIYTSFDFFGITINLLKDGFSLGLLTFFKMLGGVSCTLFLALTTPFTELFYILKRSKMPKNMLEIAMMMY
RYIFMLLEEALTMENSQKTRLGYKNLKTSYHSLGLLTGSLFIKALDKGDIIYNSLNSRGYDGNLMFFGDIAYPRTFSIVL
LGAFELMLLSLNYITIF
>Mature_256_residues
TNSTLIDNIANYNKLRSVNPTLKVIFAISSLFVSIFSKNFIVPLLITIIMSFVIIFAAKIPKNIYGKLLAIPIFFGIITF
LMMTFLFGTDIYTSFDFFGITINLLKDGFSLGLLTFFKMLGGVSCTLFLALTTPFTELFYILKRSKMPKNMLEIAMMMYR
YIFMLLEEALTMENSQKTRLGYKNLKTSYHSLGLLTGSLFIKALDKGDIIYNSLNSRGYDGNLMFFGDIAYPRTFSIVLL
GAFELMLLSLNYITIF

Specific function: Unknown

COG id: COG0619

COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003339
- InterPro:   IPR012809 [H]

Pfam domain/function: PF02361 CbiQ [H]

EC number: NA

Molecular weight: Translated: 29217; Mature: 29085

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNSTLIDNIANYNKLRSVNPTLKVIFAISSLFVSIFSKNFIVPLLITIIMSFVIIFAAK
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
IPKNIYGKLLAIPIFFGIITFLMMTFLFGTDIYTSFDFFGITINLLKDGFSLGLLTFFKM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LGGVSCTLFLALTTPFTELFYILKRSKMPKNMLEIAMMMYRYIFMLLEEALTMENSQKTR
HCCCHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LGYKNLKTSYHSLGLLTGSLFIKALDKGDIIYNSLNSRGYDGNLMFFGDIAYPRTFSIVL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEECCCCCHHHHHHH
LGAFELMLLSLNYITIF
HHHHHHHHHHHHHHEEC
>Mature Secondary Structure 
TNSTLIDNIANYNKLRSVNPTLKVIFAISSLFVSIFSKNFIVPLLITIIMSFVIIFAAK
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
IPKNIYGKLLAIPIFFGIITFLMMTFLFGTDIYTSFDFFGITINLLKDGFSLGLLTFFKM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LGGVSCTLFLALTTPFTELFYILKRSKMPKNMLEIAMMMYRYIFMLLEEALTMENSQKTR
HCCCHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LGYKNLKTSYHSLGLLTGSLFIKALDKGDIIYNSLNSRGYDGNLMFFGDIAYPRTFSIVL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEECCCCCHHHHHHH
LGAFELMLLSLNYITIF
HHHHHHHHHHHHHHEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]