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The map label for this gene is rpl24p [H]

Identifier: 45358973

GI number: 45358973

Start: 1387055

End: 1387414

Strand: Direct

Name: rpl24p [H]

Synonym: MMP1410

Alternate gene names: 45358973

Gene position: 1387055-1387414 (Clockwise)

Preceding gene: 45358972

Following gene: 45358974

Centisome position: 83.5

GC content: 32.78

Gene sequence:

>360_bases
ATGGTTTTGACAAACTCAAAACAGCCAAGAAAACAAAGAAAAGCACTCTACAACGCACCATTACATTTAAGAAATAGCGT
TATGTCTGCAATGCTAGCAAAAGAATTAAAAGAAAAATACGCTAAAAACTCCCTTCCTGTGAAAAAAGGAGATACTGTAA
AAGTACTCAGAGGAAATTTCAAAGGAATTGAAGGGGAAGTTTCAAAAGTTGACTACGCAGGATACAAAATCATTGTTGAA
GGAGTAGTTAACAAAAAACAAGATGGAAATGAAACAGCATATCCAATTCATCCATCAAATGTTATGATTACCAAATTGGA
CGAATCAGACGAAAAGAGATTTAAAAATTCAAGTAACTAA

Upstream 100 bases:

>100_bases
TCAGAAATTAAAGGTCCAGTTTCAAAAGAAGCTGCTGAAAGATGGCCTGGTGTTTCAAGATTAGCTAAAATTATTCACTA
ATTAGGCATGTGGTGAAATC

Downstream 100 bases:

>100_bases
GAGGTGTGAGCATGGCAATTAAAGGACCTAGAAAACATCTTAAAAGATTGGCTGCTCCAGCAAATTGGCAACTTCCTAGA
AAAGTGAAAACATTTACGGT

Product: 50S ribosomal protein L24P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MVLTNSKQPRKQRKALYNAPLHLRNSVMSAMLAKELKEKYAKNSLPVKKGDTVKVLRGNFKGIEGEVSKVDYAGYKIIVE
GVVNKKQDGNETAYPIHPSNVMITKLDESDEKRFKNSSN

Sequences:

>Translated_119_residues
MVLTNSKQPRKQRKALYNAPLHLRNSVMSAMLAKELKEKYAKNSLPVKKGDTVKVLRGNFKGIEGEVSKVDYAGYKIIVE
GVVNKKQDGNETAYPIHPSNVMITKLDESDEKRFKNSSN
>Mature_119_residues
MVLTNSKQPRKQRKALYNAPLHLRNSVMSAMLAKELKEKYAKNSLPVKKGDTVKVLRGNFKGIEGEVSKVDYAGYKIIVE
GVVNKKQDGNETAYPIHPSNVMITKLDESDEKRFKNSSN

Specific function: Located at the polypeptide exit tunnel on the outside of the subunit [H]

COG id: COG0198

COG function: function code J; Ribosomal protein L24

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L24P family [H]

Homologues:

Organism=Homo sapiens, GI4506621, Length=97, Percent_Identity=44.3298969072165, Blast_Score=84, Evalue=3e-17,
Organism=Homo sapiens, GI7705813, Length=97, Percent_Identity=44.3298969072165, Blast_Score=83, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17535693, Length=103, Percent_Identity=38.8349514563107, Blast_Score=77, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI32564329, Length=91, Percent_Identity=38.4615384615385, Blast_Score=69, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17535691, Length=91, Percent_Identity=38.4615384615385, Blast_Score=69, Evalue=5e-13,
Organism=Saccharomyces cerevisiae, GI6323376, Length=104, Percent_Identity=39.4230769230769, Blast_Score=75, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6321471, Length=97, Percent_Identity=40.2061855670103, Blast_Score=74, Evalue=4e-15,
Organism=Drosophila melanogaster, GI21357853, Length=98, Percent_Identity=40.8163265306122, Blast_Score=78, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR005825
- InterPro:   IPR014723
- InterPro:   IPR005756
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW [H]

EC number: NA

Molecular weight: Translated: 13395; Mature: 13395

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: PS01108 RIBOSOMAL_L24

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLTNSKQPRKQRKALYNAPLHLRNSVMSAMLAKELKEKYAKNSLPVKKGDTVKVLRGNF
CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCC
KGIEGEVSKVDYAGYKIIVEGVVNKKQDGNETAYPIHPSNVMITKLDESDEKRFKNSSN
CCCCCCCCEECCCCEEEEEEEHHCCCCCCCCCCCEECCCCEEEEECCCCHHHHCCCCCC
>Mature Secondary Structure
MVLTNSKQPRKQRKALYNAPLHLRNSVMSAMLAKELKEKYAKNSLPVKKGDTVKVLRGNF
CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCC
KGIEGEVSKVDYAGYKIIVEGVVNKKQDGNETAYPIHPSNVMITKLDESDEKRFKNSSN
CCCCCCCCEECCCCEEEEEEEHHCCCCCCCCCCCEECCCCEEEEECCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA