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The map label for this gene is rnp1

Identifier: 45358970

GI number: 45358970

Start: 1385831

End: 1386121

Strand: Direct

Name: rnp1

Synonym: MMP1407

Alternate gene names: 45358970

Gene position: 1385831-1386121 (Clockwise)

Preceding gene: 45358969

Following gene: 45358971

Centisome position: 83.43

GC content: 32.3

Gene sequence:

>291_bases
TTGTCACAAAATATATTGAGACATGAACTAATTGGATTAAACCTTGAAGTTGTAAAATCTACAGATTCTGGTTTGATTTC
AACAAAAGGTAGAGTAATTAACGAGACTAGAAATACGCTAGTTCTTGAAAAAGAAAACGGCAAGGAAATTACCCTCGTAA
AAGAAATTTCAACATTCAGAATTCAATTTGAGTCTGAAAATGTTGTAAAAATCGATATCGATGGAAGACTACTTGTTGGA
CGACCTGAAGACAGGTTGAAAAGAAAAATAAAACAGCTCTACTCGTACTAA

Upstream 100 bases:

>100_bases
AAAAGACATGATAGATGTCAGATAATTAACTATTCACATGAGTATGTGGATACTGAAAAATGTACACCCCCATGCTCAAA
GGGTAGGGACACCCATGAAA

Downstream 100 bases:

>100_bases
GCTTCTCAGCTATTTTAAATGTCCCAAATTGAAAATAAGAATTAAAATTTAAGTTCTAAACAGGCGTTAGTGGTATTTGT
GAAAACATTATATACCTGTA

Product: ribonuclease P protein component 1

Products: NA

Alternate protein names: RNase P component 1

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MSQNILRHELIGLNLEVVKSTDSGLISTKGRVINETRNTLVLEKENGKEITLVKEISTFRIQFESENVVKIDIDGRLLVG
RPEDRLKRKIKQLYSY

Sequences:

>Translated_96_residues
MSQNILRHELIGLNLEVVKSTDSGLISTKGRVINETRNTLVLEKENGKEITLVKEISTFRIQFESENVVKIDIDGRLLVG
RPEDRLKRKIKQLYSY
>Mature_95_residues
SQNILRHELIGLNLEVVKSTDSGLISTKGRVINETRNTLVLEKENGKEITLVKEISTFRIQFESENVVKIDIDGRLLVGR
PEDRLKRKIKQLYSY

Specific function: Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends

COG id: COG1588

COG function: function code J; RNase P/RNase MRP subunit p29

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the eukaryotic/archaeal RNase P protein component 1 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RNP1_METMP (P60832)

Other databases:

- EMBL:   BX950229
- RefSeq:   NP_988527.1
- ProteinModelPortal:   P60832
- SMR:   P60832
- GeneID:   2762428
- GenomeReviews:   BX950229_GR
- KEGG:   mmp:MMP1407
- NMPDR:   fig|267377.1.peg.1407
- HOGENOM:   HBG704950
- OMA:   ISTKGRV
- ProtClustDB:   PRK03879
- BioCyc:   MMAR267377:MMP1407-MONOMER
- BRENDA:   3.1.26.5
- HAMAP:   MF_00754
- InterPro:   IPR002730
- Gene3D:   G3DSA:2.30.30.210

Pfam domain/function: PF01868 UPF0086; SSF101744 RNase_P_Rpp29

EC number: =3.1.26.5

Molecular weight: Translated: 11069; Mature: 10938

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQNILRHELIGLNLEVVKSTDSGLISTKGRVINETRNTLVLEKENGKEITLVKEISTFR
CCCCCCHHHHCCCCEEEEECCCCCEEECCCEEEECCCCEEEEECCCCCEEEEEEECEEEE
IQFESENVVKIDIDGRLLVGRPEDRLKRKIKQLYSY
EEECCCCEEEEEECCEEEEECCHHHHHHHHHHHHCC
>Mature Secondary Structure 
SQNILRHELIGLNLEVVKSTDSGLISTKGRVINETRNTLVLEKENGKEITLVKEISTFR
CCCCCHHHHCCCCEEEEECCCCCEEECCCEEEECCCCEEEEECCCCCEEEEEEECEEEE
IQFESENVVKIDIDGRLLVGRPEDRLKRKIKQLYSY
EEECCCCEEEEEECCEEEEECCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA