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The map label for this gene is yciH [C]

Identifier: 45358969

GI number: 45358969

Start: 1385447

End: 1385755

Strand: Direct

Name: yciH [C]

Synonym: MMP1406

Alternate gene names: 45358969

Gene position: 1385447-1385755 (Clockwise)

Preceding gene: 45358968

Following gene: 45358970

Centisome position: 83.4

GC content: 37.86

Gene sequence:

>309_bases
ATGCCAGAGATTTGTCCTATATGTGGTTTACCAAAAGATTTGTGTGTCTGTGAAGAGATTGCAAAGGAAGAACAGAAAAT
TAAAGTTTACGTAACTAAAAGAAGGTTTGGTAAGCTGATGACAGTCGTCGACGGCTTTGATGCGGACTTGATTGATGTAA
AAGATTTGGCTAAAAAGTTAAAAGATATATGTGCCTGCGGCGGAACTGTAAAGAAAGATTCTATCGAGTTACAGGGAGAC
CACAGGAGAAAAGCTGAAGAAACCCTAATCAAAATGGGATTCTCAAAAGACATGATAGATGTCAGATAA

Upstream 100 bases:

>100_bases
AAGCAGAAAATGCTTAAGCATAATTTTAAATACCATCAATCAGTATGTATATCCAGTATACTTATAACAAAATTAGTCTA
TCAAGATGAGAGGTGCATTG

Downstream 100 bases:

>100_bases
TTAACTATTCACATGAGTATGTGGATACTGAAAAATGTACACCCCCATGCTCAAAGGGTAGGGACACCCATGAAATTGTC
ACAAAATATATTGAGACATG

Product: translation initiation factor Sui1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 101

Protein sequence:

>102_residues
MPEICPICGLPKDLCVCEEIAKEEQKIKVYVTKRRFGKLMTVVDGFDADLIDVKDLAKKLKDICACGGTVKKDSIELQGD
HRRKAEETLIKMGFSKDMIDVR

Sequences:

>Translated_102_residues
MPEICPICGLPKDLCVCEEIAKEEQKIKVYVTKRRFGKLMTVVDGFDADLIDVKDLAKKLKDICACGGTVKKDSIELQGD
HRRKAEETLIKMGFSKDMIDVR
>Mature_101_residues
PEICPICGLPKDLCVCEEIAKEEQKIKVYVTKRRFGKLMTVVDGFDADLIDVKDLAKKLKDICACGGTVKKDSIELQGDH
RRKAEETLIKMGFSKDMIDVR

Specific function: Unknown

COG id: COG0023

COG function: function code J; Translation initiation factor 1 (eIF-1/SUI1) and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SUI1 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SUI1_METM5 (A4FWB4)

Other databases:

- EMBL:   CP000609
- RefSeq:   YP_001096704.1
- ProteinModelPortal:   A4FWB4
- SMR:   A4FWB4
- STRING:   A4FWB4
- GeneID:   4928814
- GenomeReviews:   CP000609_GR
- KEGG:   mmq:MmarC5_0172
- eggNOG:   arNOG11909
- HOGENOM:   HBG706849
- OMA:   MPEICPR
- ProtClustDB:   PRK00939
- BioCyc:   MMAR402880:MMARC5_0172-MONOMER
- HAMAP:   MF_00604
- InterPro:   IPR022851
- InterPro:   IPR005872
- InterPro:   IPR001950
- PIRSF:   PIRSF037511
- TIGRFAMs:   TIGR01158

Pfam domain/function: PF01253 SUI1; SSF55159 TIF_SUI1

EC number: NA

Molecular weight: Translated: 11504; Mature: 11373

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: PS50296 SUI1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
9.8 %Cys+Met (Translated Protein)
5.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
8.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEICPICGLPKDLCVCEEIAKEEQKIKVYVTKRRFGKLMTVVDGFDADLIDVKDLAKKL
CCCCCCCCCCCHHHHHHHHHHCCHHHEEEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHH
KDICACGGTVKKDSIELQGDHRRKAEETLIKMGFSKDMIDVR
HHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PEICPICGLPKDLCVCEEIAKEEQKIKVYVTKRRFGKLMTVVDGFDADLIDVKDLAKKL
CCCCCCCCCCHHHHHHHHHHCCHHHEEEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHH
KDICACGGTVKKDSIELQGDHRRKAEETLIKMGFSKDMIDVR
HHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA