Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is 37680543
Identifier: 37680543
GI number: 37680543
Start: 2388543
End: 2389106
Strand: Direct
Name: 37680543
Synonym: VV2358
Alternate gene names: NA
Gene position: 2388543-2389106 (Clockwise)
Preceding gene: 37680541
Following gene: 37680548
Centisome position: 71.2
GC content: 46.99
Gene sequence:
>564_bases TTGCTGAAAAAGAAGCCAATAACCAATTGTTACCTAAGAGAGTCATGTTGTCCCATGCCTAGAAAGCTAATTAAACGCTT TATGCCTGACCATGAAGTAATCAAACGCCAAAAAGCGCTGAAAGTGTTCGGCAATGTTTTATACAACCCTAATCTATGGT GTTTGAATCGTCGCTCCGCTGCGGGTGCGTTTGCCGTTGGTTTGTTTATGGCGTTTGTCCCTCTGCCGAGCCAGATGATC ATGTCTGCTGGGTTAGCCATTTTTCTTGGCGTAAATTTGCCACTGTCTGTCGCTCTCGTGTGGGTAAGTAACCCAGTCAC CATGCCCGTGCTGTTCTACTTTGCGTATAAGCTCGGCGCCTTTGTGATGAACGTGCCTCCGCAGCCATTTCACTTTGAGC TCTCTTGGGATTTCATTCTCGACCAAATGAGTACCATTGGCCCTCCATTTTTATTGGGTTGCGCCATTTGTGGTGTTGTC TCTGCCATCGTCGGCTACTTTGGCATACGAGGCTTGTGGCGTTATTCCGTGGTAAGAAGTTGGCAAAAGCGTCAAACAAG ATAA
Upstream 100 bases:
>100_bases CGACACGTTTTGCGCACAATAATGATAAAGATGGCAACAACAATTAGCATTAACCAAGGCCAGGAAGGCATAAGCGGCCA GTAGCTTGCCGAAATAAGGG
Downstream 100 bases:
>100_bases CGATCTTCACCCTCCATTGCAGAGAGTCAGTGTGATTTTCCGATAGAAATGCCACTTCCATTGCAACGTCGGGTAATCAA AGTTTGATTTATCTCGTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MLKKKPITNCYLRESCCPMPRKLIKRFMPDHEVIKRQKALKVFGNVLYNPNLWCLNRRSAAGAFAVGLFMAFVPLPSQMI MSAGLAIFLGVNLPLSVALVWVSNPVTMPVLFYFAYKLGAFVMNVPPQPFHFELSWDFILDQMSTIGPPFLLGCAICGVV SAIVGYFGIRGLWRYSVVRSWQKRQTR
Sequences:
>Translated_187_residues MLKKKPITNCYLRESCCPMPRKLIKRFMPDHEVIKRQKALKVFGNVLYNPNLWCLNRRSAAGAFAVGLFMAFVPLPSQMI MSAGLAIFLGVNLPLSVALVWVSNPVTMPVLFYFAYKLGAFVMNVPPQPFHFELSWDFILDQMSTIGPPFLLGCAICGVV SAIVGYFGIRGLWRYSVVRSWQKRQTR >Mature_187_residues MLKKKPITNCYLRESCCPMPRKLIKRFMPDHEVIKRQKALKVFGNVLYNPNLWCLNRRSAAGAFAVGLFMAFVPLPSQMI MSAGLAIFLGVNLPLSVALVWVSNPVTMPVLFYFAYKLGAFVMNVPPQPFHFELSWDFILDQMSTIGPPFLLGCAICGVV SAIVGYFGIRGLWRYSVVRSWQKRQTR
Specific function: Unknown
COG id: COG3216
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21197; Mature: 21197
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKKKPITNCYLRESCCPMPRKLIKRFMPDHEVIKRQKALKVFGNVLYNPNLWCLNRRSA CCCCCCCCHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCC AGAFAVGLFMAFVPLPSQMIMSAGLAIFLGVNLPLSVALVWVSNPVTMPVLFYFAYKLGA CHHHHHHHHHHHHCCCHHHHHHCCHHHEEECCCCHHEEEEEECCCHHHHHHHHHHHHHHH FVMNVPPQPFHFELSWDFILDQMSTIGPPFLLGCAICGVVSAIVGYFGIRGLWRYSVVRS HHCCCCCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WQKRQTR HHHHCCC >Mature Secondary Structure MLKKKPITNCYLRESCCPMPRKLIKRFMPDHEVIKRQKALKVFGNVLYNPNLWCLNRRSA CCCCCCCCHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCC AGAFAVGLFMAFVPLPSQMIMSAGLAIFLGVNLPLSVALVWVSNPVTMPVLFYFAYKLGA CHHHHHHHHHHHHCCCHHHHHHCCHHHEEECCCCHHEEEEEECCCHHHHHHHHHHHHHHH FVMNVPPQPFHFELSWDFILDQMSTIGPPFLLGCAICGVVSAIVGYFGIRGLWRYSVVRS HHCCCCCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WQKRQTR HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA