Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is yeaH [C]
Identifier: 37680534
GI number: 37680534
Start: 2378824
End: 2380095
Strand: Direct
Name: yeaH [C]
Synonym: VV2350
Alternate gene names: 37680534
Gene position: 2378824-2380095 (Clockwise)
Preceding gene: 37680533
Following gene: 37680535
Centisome position: 70.91
GC content: 46.86
Gene sequence:
>1272_bases ATGGCGCAATTTATAGACCGTAGGCTCAATGGCAAGAACAAGAGCGCTGTCAACAGACAGCGCTTCATGAGACGCTATAA AGAGCAGATAAAAGAGTCGGTAGCGGACGCGGTGAATCGTCGCTCGATCACCAATACGGAGACGGGTGAGGACGTTGCTA TTCCGCACAAAGACATCAAAGAGCCTCTTTTCCATCAAGGTAAAGGGGGGTTACGAGAACGTGTCCATCCAGGCAATGAC CAGTTCATTACTGGCGATAAAATCGAAAGACCCAAAGGTGGCCAAGGAGGCGGTGGTGCTGGAGACGGTGATGCCAGTGC TGATGGCGAAGGGCAAGACGATTTTGTTTTCCAAATTTCCAAAGATGAGTACTTAGACCTGTTATTTGAAGACTTGGCTT TGCCAAATCTAAAGAAAAATCAGGTGAACAAAATTACCGAGTGGAAGAAACACCGCGCGGGCTATCAAACCGCAGGGATG CCTTCCAACATTTCTATTGTGCGCTCCTTGCAACAATCCCTTGCGCGTCGCACCGCAATGTCTGCGGGCAAAAAGCGTTT ATTGCACGAGCTAGAGCTGGAGTTGGAACGCATCCAGAATCAAGAGCCCGCACAAAAGCTGGAGGAAATGAAACTTAAAC AAGAAATCGCAGAACTGCGTAAAGCGATTGAAAGCGTGCCCTTTATCGATACGTTTGACTTACGTTTCAAAAACTATGAG CGCAAGCCCGTTCCTTCAAGCCAAGCCGTCATGTTTTGTCTGATGGACGTTTCAGGCTCCATGGATCAAGCGACTAAAGA CATTGCCAAGCGCTTTTATGTGCTGCTCTATCTGTTCCTTAATCGTACGTATGAAAACGTGGAAGTGGTGTTTATACGTC ACCATACGCAAGCAAAAGAGGTCGATGAGCACGAGTTTTTCTACTCACAAGAAACCGGGGGCACCATCGTTTCCAGTGCT CTGAAATTGATGGATGAAATTGTTAAAGCTCGCTATCCCGTTGGCGAATGGAACATCTACGCTGCACAAGCTTCTGATGG GGATAACTGGGCTGACGATTCACCTCGTTGCAAAGAGTTGTTAACCAACAAGTTGTTACCTAACTGCCAATACTACGCCT ATATCGAAATTACTCGACGTTCACACCAAACGCTGTGGCATGAATATGAAAAGCTTGAGGAGAGCTTTGATAATTTTGCG ATGAAGAATATTCGCAGCGTTGAAGACATCTTCCCGGTATTCAGAGAGCTGTTTCACAAGGAAACGGCATAG
Upstream 100 bases:
>100_bases GAGAAACAAGTTCGCTTGCTTTCTGAGTGGTACCTGCGCGTACGTAAATCGTCCTAACCCGGATGTGAGTTAGGTCTGTG GAACATGAGAGGGGAATTTC
Downstream 100 bases:
>100_bases GAGGCCTGTATGACAACCAAGACAAAGAAAAAAAGCAAGATGTTGCCAGATGGGCCAGACTGGACCTTTGATCTGTTGGA AAAATACCATACCGAGATCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 423; Mature: 422
Protein sequence:
>423_residues MAQFIDRRLNGKNKSAVNRQRFMRRYKEQIKESVADAVNRRSITNTETGEDVAIPHKDIKEPLFHQGKGGLRERVHPGND QFITGDKIERPKGGQGGGGAGDGDASADGEGQDDFVFQISKDEYLDLLFEDLALPNLKKNQVNKITEWKKHRAGYQTAGM PSNISIVRSLQQSLARRTAMSAGKKRLLHELELELERIQNQEPAQKLEEMKLKQEIAELRKAIESVPFIDTFDLRFKNYE RKPVPSSQAVMFCLMDVSGSMDQATKDIAKRFYVLLYLFLNRTYENVEVVFIRHHTQAKEVDEHEFFYSQETGGTIVSSA LKLMDEIVKARYPVGEWNIYAAQASDGDNWADDSPRCKELLTNKLLPNCQYYAYIEITRRSHQTLWHEYEKLEESFDNFA MKNIRSVEDIFPVFRELFHKETA
Sequences:
>Translated_423_residues MAQFIDRRLNGKNKSAVNRQRFMRRYKEQIKESVADAVNRRSITNTETGEDVAIPHKDIKEPLFHQGKGGLRERVHPGND QFITGDKIERPKGGQGGGGAGDGDASADGEGQDDFVFQISKDEYLDLLFEDLALPNLKKNQVNKITEWKKHRAGYQTAGM PSNISIVRSLQQSLARRTAMSAGKKRLLHELELELERIQNQEPAQKLEEMKLKQEIAELRKAIESVPFIDTFDLRFKNYE RKPVPSSQAVMFCLMDVSGSMDQATKDIAKRFYVLLYLFLNRTYENVEVVFIRHHTQAKEVDEHEFFYSQETGGTIVSSA LKLMDEIVKARYPVGEWNIYAAQASDGDNWADDSPRCKELLTNKLLPNCQYYAYIEITRRSHQTLWHEYEKLEESFDNFA MKNIRSVEDIFPVFRELFHKETA >Mature_422_residues AQFIDRRLNGKNKSAVNRQRFMRRYKEQIKESVADAVNRRSITNTETGEDVAIPHKDIKEPLFHQGKGGLRERVHPGNDQ FITGDKIERPKGGQGGGGAGDGDASADGEGQDDFVFQISKDEYLDLLFEDLALPNLKKNQVNKITEWKKHRAGYQTAGMP SNISIVRSLQQSLARRTAMSAGKKRLLHELELELERIQNQEPAQKLEEMKLKQEIAELRKAIESVPFIDTFDLRFKNYER KPVPSSQAVMFCLMDVSGSMDQATKDIAKRFYVLLYLFLNRTYENVEVVFIRHHTQAKEVDEHEFFYSQETGGTIVSSAL KLMDEIVKARYPVGEWNIYAAQASDGDNWADDSPRCKELLTNKLLPNCQYYAYIEITRRSHQTLWHEYEKLEESFDNFAM KNIRSVEDIFPVFRELFHKETA
Specific function: Unknown
COG id: COG2718
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0229 family [H]
Homologues:
Organism=Escherichia coli, GI1788084, Length=423, Percent_Identity=74.468085106383, Blast_Score=659, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006698 [H]
Pfam domain/function: PF04285 DUF444 [H]
EC number: NA
Molecular weight: Translated: 48784; Mature: 48653
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQFIDRRLNGKNKSAVNRQRFMRRYKEQIKESVADAVNRRSITNTETGEDVAIPHKDIK CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH EPLFHQGKGGLRERVHPGNDQFITGDKIERPKGGQGGGGAGDGDASADGEGQDDFVFQIS HHHHHCCCCCHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC KDEYLDLLFEDLALPNLKKNQVNKITEWKKHRAGYQTAGMPSNISIVRSLQQSLARRTAM CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH SAGKKRLLHELELELERIQNQEPAQKLEEMKLKQEIAELRKAIESVPFIDTFDLRFKNYE HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHCCCC RKPVPSSQAVMFCLMDVSGSMDQATKDIAKRFYVLLYLFLNRTYENVEVVFIRHHTQAKE CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHH VDEHEFFYSQETGGTIVSSALKLMDEIVKARYPVGEWNIYAAQASDGDNWADDSPRCKEL CCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHH LTNKLLPNCQYYAYIEITRRSHQTLWHEYEKLEESFDNFAMKNIRSVEDIFPVFRELFHK HHHHCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETA CCC >Mature Secondary Structure AQFIDRRLNGKNKSAVNRQRFMRRYKEQIKESVADAVNRRSITNTETGEDVAIPHKDIK CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH EPLFHQGKGGLRERVHPGNDQFITGDKIERPKGGQGGGGAGDGDASADGEGQDDFVFQIS HHHHHCCCCCHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC KDEYLDLLFEDLALPNLKKNQVNKITEWKKHRAGYQTAGMPSNISIVRSLQQSLARRTAM CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH SAGKKRLLHELELELERIQNQEPAQKLEEMKLKQEIAELRKAIESVPFIDTFDLRFKNYE HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHCCCC RKPVPSSQAVMFCLMDVSGSMDQATKDIAKRFYVLLYLFLNRTYENVEVVFIRHHTQAKE CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHH VDEHEFFYSQETGGTIVSSALKLMDEIVKARYPVGEWNIYAAQASDGDNWADDSPRCKEL CCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHH LTNKLLPNCQYYAYIEITRRSHQTLWHEYEKLEESFDNFAMKNIRSVEDIFPVFRELFHK HHHHCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETA CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA