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The map label for this gene is yfcA [C]

Identifier: 37680514

GI number: 37680514

Start: 2353774

End: 2354556

Strand: Direct

Name: yfcA [C]

Synonym: VV2330

Alternate gene names: 37680514

Gene position: 2353774-2354556 (Clockwise)

Preceding gene: 161486617

Following gene: 37680515

Centisome position: 70.17

GC content: 49.04

Gene sequence:

>783_bases
ATGGAATTATTAGAACCAACCATGCTTGTTGTCCTTGCTTTGGTTGCTTTCATCGCTGGATTTATCGATGCCGTTGCAGG
TGGAGGGGGAATGCTCACCGTTCCAGCCCTTCTTTCACTGGGCTTACCGCCACATATTGCACTAGGAACAAACAAACTTG
CCGCGACGTTTGCCTCTTCTACTGCCGCATTTACTTACTATCGCAAACGCCTGTTTAAGCCTCAGTGCTGGCTTCGCGCA
TTTGCAGCTACTTTGGTAGGTGCCACATTGGGCACACTCTTTGTCGATGCCATCAGCACCGAGTGGTTAGAGAAAATACT
GCCACTGATCATTTTAGCCGCAGCCATCTATACCATTTGGCATAAAACGCCCGAATCGGCACACAACAGCACCACTCCCG
AGCCATGCCCAATGCTGAATAAAAAGCAATTTGTGCAAGGTGCCACACTAGGATTTTATGATGGTGTCGCGGGACCAGGC
ACTGGCGCTTTCTGGACCGTCAGCTCAATGGCACTCTATAAACTCAATATCCTTCTGGCCTCAGGCCTCGCAAAAGCCAT
GAACTTTACCAGTAACATAACTTCGTTGGTCATGTTCGCTTTCTTAGGGCACATCAACTGGGGGCTTGGATTAATCATGG
GCGTTTGCCTGATGGCAGGGGCGTTTGTGGGTGCTCACTCTGCGATTCGATTTGGCGCAAAGTTTATTCGTCCGGTTTTT
GTTACTGTCGTCAGTATTCTTGCCATGAAACTGGCCTATGAAGCTTGGTTTGTCACGCTATGA

Upstream 100 bases:

>100_bases
TGGTAAAGCGATTCTGGACTCCCTGCCTCCTTTTAAACGAATCATTGAAAAATAGAACTTGCTGCATTACACAATTAATA
ACTAGAAGAACGTTAACCCT

Downstream 100 bases:

>100_bases
AACTACAAGATATTGCGCAGCGGCTTGATGAGCTTGCTGTTCAGGCCGCTCAGTTAGACAGACAAAGAGGCGAACATCAC
ACCCCTTTGTTTGATGAGCG

Product: permease

Products: NA

Alternate protein names: ORF9 [H]

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MELLEPTMLVVLALVAFIAGFIDAVAGGGGMLTVPALLSLGLPPHIALGTNKLAATFASSTAAFTYYRKRLFKPQCWLRA
FAATLVGATLGTLFVDAISTEWLEKILPLIILAAAIYTIWHKTPESAHNSTTPEPCPMLNKKQFVQGATLGFYDGVAGPG
TGAFWTVSSMALYKLNILLASGLAKAMNFTSNITSLVMFAFLGHINWGLGLIMGVCLMAGAFVGAHSAIRFGAKFIRPVF
VTVVSILAMKLAYEAWFVTL

Sequences:

>Translated_260_residues
MELLEPTMLVVLALVAFIAGFIDAVAGGGGMLTVPALLSLGLPPHIALGTNKLAATFASSTAAFTYYRKRLFKPQCWLRA
FAATLVGATLGTLFVDAISTEWLEKILPLIILAAAIYTIWHKTPESAHNSTTPEPCPMLNKKQFVQGATLGFYDGVAGPG
TGAFWTVSSMALYKLNILLASGLAKAMNFTSNITSLVMFAFLGHINWGLGLIMGVCLMAGAFVGAHSAIRFGAKFIRPVF
VTVVSILAMKLAYEAWFVTL
>Mature_260_residues
MELLEPTMLVVLALVAFIAGFIDAVAGGGGMLTVPALLSLGLPPHIALGTNKLAATFASSTAAFTYYRKRLFKPQCWLRA
FAATLVGATLGTLFVDAISTEWLEKILPLIILAAAIYTIWHKTPESAHNSTTPEPCPMLNKKQFVQGATLGFYDGVAGPG
TGAFWTVSSMALYKLNILLASGLAKAMNFTSNITSLVMFAFLGHINWGLGLIMGVCLMAGAFVGAHSAIRFGAKFIRPVF
VTVVSILAMKLAYEAWFVTL

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

Organism=Escherichia coli, GI1788667, Length=253, Percent_Identity=33.9920948616601, Blast_Score=138, Evalue=5e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 27725; Mature: 27725

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELLEPTMLVVLALVAFIAGFIDAVAGGGGMLTVPALLSLGLPPHIALGTNKLAATFASS
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEECCHHHHHHHHHH
TAAFTYYRKRLFKPQCWLRAFAATLVGATLGTLFVDAISTEWLEKILPLIILAAAIYTIW
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HKTPESAHNSTTPEPCPMLNKKQFVQGATLGFYDGVAGPGTGAFWTVSSMALYKLNILLA
HCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
SGLAKAMNFTSNITSLVMFAFLGHINWGLGLIMGVCLMAGAFVGAHSAIRFGAKFIRPVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTVVSILAMKLAYEAWFVTL
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1655697 [H]