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The map label for this gene is yfjY [C]

Identifier: 37680435

GI number: 37680435

Start: 2272819

End: 2273373

Strand: Direct

Name: yfjY [C]

Synonym: VV2251

Alternate gene names: 37680435

Gene position: 2272819-2273373 (Clockwise)

Preceding gene: 37680432

Following gene: 37680436

Centisome position: 67.75

GC content: 49.01

Gene sequence:

>555_bases
GTGTTACCCGTAATCAAAATCTCTTCAGGTATATGTCATAGCAGTGAACCTTTCCCTGTATTGCTAAGGAGCCTAGCTAT
GACTCATTTCCCTCGCCGCCGTTATTTATTCTCTCAACGTGCCTATGAGCACCGAGTGCTTGAAGAAGCAGCAGAGATCC
TCGAACAACGTTATGTGCGCGGTGAAGCCTTTACGCGCACGCAAAACACCGCTGATTATCTACGTTGCAAATTGGCCGGA
TACGAGCACGAGGTCTTTGCCGTTTTACTGTTGGATAACCAGCATCGGCTGATTGAATTTAAGGAGCTATTTCGCGGCAC
GGTAGACGCCGCCAACGTCTATCCAAGAGAAGTAGTCAAAGAAGCATTGCACGTTAACGCTGCTGCGGTGATCTTCGCCC
ATAACCACCCATCCGGTGATCCTGAACCATCTCAAGCAGACAAGCGAATAACGGAACGTTTGAAAGATGCATTATCGCTG
GTGGATATTCGCGTGCTAGATCATGTGGTCGTCGGCGAAAGCTGTGTGTCGTTTGCGGAAAGGGGATGGATATGA

Upstream 100 bases:

>100_bases
CCATTACTTCTTTTAGTTTCAGAAATCTCATGGGATGTCCTCCTATCTCTTGTGGTCCCATGGGATGAGCTGACATTGTT
AAAAAATGCGGTAACTCAAC

Downstream 100 bases:

>100_bases
TCGTGAATTGCTATCAAGAGATTCAGCTTGCTGACAGCTTTTGTGATGCCCTGAGTGTGATACTTCGCCGTTTCAAAATC
CCGCAAGAGGCAGAGCGTCT

Product: DNA repair protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MLPVIKISSGICHSSEPFPVLLRSLAMTHFPRRRYLFSQRAYEHRVLEEAAEILEQRYVRGEAFTRTQNTADYLRCKLAG
YEHEVFAVLLLDNQHRLIEFKELFRGTVDAANVYPREVVKEALHVNAAAVIFAHNHPSGDPEPSQADKRITERLKDALSL
VDIRVLDHVVVGESCVSFAERGWI

Sequences:

>Translated_184_residues
MLPVIKISSGICHSSEPFPVLLRSLAMTHFPRRRYLFSQRAYEHRVLEEAAEILEQRYVRGEAFTRTQNTADYLRCKLAG
YEHEVFAVLLLDNQHRLIEFKELFRGTVDAANVYPREVVKEALHVNAAAVIFAHNHPSGDPEPSQADKRITERLKDALSL
VDIRVLDHVVVGESCVSFAERGWI
>Mature_184_residues
MLPVIKISSGICHSSEPFPVLLRSLAMTHFPRRRYLFSQRAYEHRVLEEAAEILEQRYVRGEAFTRTQNTADYLRCKLAG
YEHEVFAVLLLDNQHRLIEFKELFRGTVDAANVYPREVVKEALHVNAAAVIFAHNHPSGDPEPSQADKRITERLKDALSL
VDIRVLDHVVVGESCVSFAERGWI

Specific function: Unknown

COG id: COG2003

COG function: function code L; DNA repair proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0758 family [H]

Homologues:

Organism=Escherichia coli, GI1788997, Length=144, Percent_Identity=53.4722222222222, Blast_Score=145, Evalue=2e-36,
Organism=Escherichia coli, GI87082300, Length=116, Percent_Identity=53.448275862069, Blast_Score=138, Evalue=2e-34,
Organism=Escherichia coli, GI2367100, Length=125, Percent_Identity=56.8, Blast_Score=138, Evalue=3e-34,
Organism=Escherichia coli, GI1788312, Length=125, Percent_Identity=55.2, Blast_Score=132, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001405
- InterPro:   IPR020891 [H]

Pfam domain/function: PF04002 DUF2466 [H]

EC number: NA

Molecular weight: Translated: 21038; Mature: 21038

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: PS01302 RADC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPVIKISSGICHSSEPFPVLLRSLAMTHFPRRRYLFSQRAYEHRVLEEAAEILEQRYVR
CCCEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GEAFTRTQNTADYLRCKLAGYEHEVFAVLLLDNQHRLIEFKELFRGTVDAANVYPREVVK
CHHHHCCCCHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHH
EALHVNAAAVIFAHNHPSGDPEPSQADKRITERLKDALSLVDIRVLDHVVVGESCVSFAE
HHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGWI
HCCC
>Mature Secondary Structure
MLPVIKISSGICHSSEPFPVLLRSLAMTHFPRRRYLFSQRAYEHRVLEEAAEILEQRYVR
CCCEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GEAFTRTQNTADYLRCKLAGYEHEVFAVLLLDNQHRLIEFKELFRGTVDAANVYPREVVK
CHHHHCCCCHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHH
EALHVNAAAVIFAHNHPSGDPEPSQADKRITERLKDALSLVDIRVLDHVVVGESCVSFAE
HHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGWI
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]