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The map label for this gene is 37680432

Identifier: 37680432

GI number: 37680432

Start: 2271404

End: 2272330

Strand: Direct

Name: 37680432

Synonym: VV2248

Alternate gene names: NA

Gene position: 2271404-2272330 (Clockwise)

Preceding gene: 37680431

Following gene: 37680435

Centisome position: 67.71

GC content: 43.26

Gene sequence:

>927_bases
GTGGTAACCTTCCTCTCAATAGTGGACATCCGATTGAAACCTATGAGAGATCATCTCGATTTAAATACCTACAGACAGCT
CGCTGAACAGCTCCAATCCTTGACTGAGTCGGAAGCCAATTTACACGCTTTTATTGTCGGCCATTTTGAAGAACTCTCTT
ACTACGGCATCATCGATCTTGCTCAAAAAGCGCAAGTCAGCAAGGCAACCATAGGGCGTTATTTAAATAAGCTGGGATTT
ACCGGCTATGCAGCCTTCAAGAATGCGCTCAAACAAGAGTTGATAACCAATAATATGGTTGCGCCAATCGAAGCCAATAA
ATCCAAGCTTTTCGATCAAGAGATTGATACGAAGACAGAAGCTCAACGCTATATTGGCAATGTTGCCCAACTTATTGATC
AGTTCCGTCAAGAGTTAAATATCGAAGAACTCGATAAGCTTTCGCAAAAAATTGCTGAGAAAAATCGTACGATTTATGTG
GTCGGCCCCGCTTCCTCACACTCTTTGGCTCTGCACTTCTCAACCTTGCTTAAATACAGCCGCTCTAATGTCGTTTTGCT
GCCTTTAGACAAGGGCGAGTTACCCAAAGCAATGCTGGGCATCTCAGAGGAGGATGTTTTGGTGGCTTTTTCCTATTACC
GATTCAACCCTGTTGTCTTGGATATCACCAAATATTTCAGTAGCAAATGCGCCTTCGTTGCCATGGTGACGAATACGCAC
TCCAACCCGTATGGCATCTACAGTGACGTGCAATTTGTTTTGCCTAGTGATGTGGACTCCATCTTCCACAGCCGCACGAT
CGGCTTCTTGTTTGTCGAATTACTGCTGTTTCTGGTGCAGAAAGCTTCTCGAAATAATGATAATTTTGAAGAGCTTGAGG
AGCTATTTAAGTTCTTTGGTACTTTTTCCTCACTTGAGTTTAAGTAA

Upstream 100 bases:

>100_bases
AGACAATATGAGGCTTAGCACTTGTTATCTAAAGAGTTAAGCCCATTTCTTTTACTAGGATCAAGTTTCAAAACAGAAAA
TTAAAACAGCTCAGAACCTT

Downstream 100 bases:

>100_bases
CATTTCAATTGCTTTGCAACTGAACCTAATTCTGGCAAAGAGAATGAAATTAACTTATTAAATCATTAAGTTAATTAAGC
CAACTTACTACAAGCAGGTT

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator RpiR Family; Transcriptional Regulator; SIS Domain Protein; Transcriptional Regulator RpiR Family SIS Domain

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MVTFLSIVDIRLKPMRDHLDLNTYRQLAEQLQSLTESEANLHAFIVGHFEELSYYGIIDLAQKAQVSKATIGRYLNKLGF
TGYAAFKNALKQELITNNMVAPIEANKSKLFDQEIDTKTEAQRYIGNVAQLIDQFRQELNIEELDKLSQKIAEKNRTIYV
VGPASSHSLALHFSTLLKYSRSNVVLLPLDKGELPKAMLGISEEDVLVAFSYYRFNPVVLDITKYFSSKCAFVAMVTNTH
SNPYGIYSDVQFVLPSDVDSIFHSRTIGFLFVELLLFLVQKASRNNDNFEELEELFKFFGTFSSLEFK

Sequences:

>Translated_308_residues
MVTFLSIVDIRLKPMRDHLDLNTYRQLAEQLQSLTESEANLHAFIVGHFEELSYYGIIDLAQKAQVSKATIGRYLNKLGF
TGYAAFKNALKQELITNNMVAPIEANKSKLFDQEIDTKTEAQRYIGNVAQLIDQFRQELNIEELDKLSQKIAEKNRTIYV
VGPASSHSLALHFSTLLKYSRSNVVLLPLDKGELPKAMLGISEEDVLVAFSYYRFNPVVLDITKYFSSKCAFVAMVTNTH
SNPYGIYSDVQFVLPSDVDSIFHSRTIGFLFVELLLFLVQKASRNNDNFEELEELFKFFGTFSSLEFK
>Mature_308_residues
MVTFLSIVDIRLKPMRDHLDLNTYRQLAEQLQSLTESEANLHAFIVGHFEELSYYGIIDLAQKAQVSKATIGRYLNKLGF
TGYAAFKNALKQELITNNMVAPIEANKSKLFDQEIDTKTEAQRYIGNVAQLIDQFRQELNIEELDKLSQKIAEKNRTIYV
VGPASSHSLALHFSTLLKYSRSNVVLLPLDKGELPKAMLGISEEDVLVAFSYYRFNPVVLDITKYFSSKCAFVAMVTNTH
SNPYGIYSDVQFVLPSDVDSIFHSRTIGFLFVELLLFLVQKASRNNDNFEELEELFKFFGTFSSLEFK

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35119; Mature: 35119

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: PS00356 HTH_LACI_1 ; PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTFLSIVDIRLKPMRDHLDLNTYRQLAEQLQSLTESEANLHAFIVGHFEELSYYGIIDL
CEEEEEEEHHEEECCHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHH
AQKAQVSKATIGRYLNKLGFTGYAAFKNALKQELITNNMVAPIEANKSKLFDQEIDTKTE
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHH
AQRYIGNVAQLIDQFRQELNIEELDKLSQKIAEKNRTIYVVGPASSHSLALHFSTLLKYS
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHC
RSNVVLLPLDKGELPKAMLGISEEDVLVAFSYYRFNPVVLDITKYFSSKCAFVAMVTNTH
CCCEEEEECCCCCCCHHHHCCCCCCEEEEEEEHCCCCCEEHHHHHHCCCCEEEEEEECCC
SNPYGIYSDVQFVLPSDVDSIFHSRTIGFLFVELLLFLVQKASRNNDNFEELEELFKFFG
CCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC
TFSSLEFK
CCCCCCCC
>Mature Secondary Structure
MVTFLSIVDIRLKPMRDHLDLNTYRQLAEQLQSLTESEANLHAFIVGHFEELSYYGIIDL
CEEEEEEEHHEEECCHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHH
AQKAQVSKATIGRYLNKLGFTGYAAFKNALKQELITNNMVAPIEANKSKLFDQEIDTKTE
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHH
AQRYIGNVAQLIDQFRQELNIEELDKLSQKIAEKNRTIYVVGPASSHSLALHFSTLLKYS
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHC
RSNVVLLPLDKGELPKAMLGISEEDVLVAFSYYRFNPVVLDITKYFSSKCAFVAMVTNTH
CCCEEEEECCCCCCCHHHHCCCCCCEEEEEEEHCCCCCEEHHHHHHCCCCEEEEEEECCC
SNPYGIYSDVQFVLPSDVDSIFHSRTIGFLFVELLLFLVQKASRNNDNFEELEELFKFFG
CCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC
TFSSLEFK
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA