Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
---|---|
Accession | NC_005139 |
Length | 3,354,505 |
Click here to switch to the map view.
The map label for this gene is 37680412
Identifier: 37680412
GI number: 37680412
Start: 2249243
End: 2249575
Strand: Direct
Name: 37680412
Synonym: VV2228
Alternate gene names: NA
Gene position: 2249243-2249575 (Clockwise)
Preceding gene: 37680411
Following gene: 37680418
Centisome position: 67.05
GC content: 45.95
Gene sequence:
>333_bases ATGGCAAAACGACGTTCTAACCAAGAATGGCAAGCTCTCTTAGAACAATATGAAATCAGCAATATTACTCAACGCGTTTT TTGCGAACAGCACGGGCTGAGTTTATCTACATTCTTCGCCAAACGGCGCCAACTTCAAACCGCAATACGACCAACGCCAG TTGGATTTGTCAGAGTTGAAGTCGTCGAAAAGACAACGAAGTATCAAGCTCAGATAGCAACGGCTAACATGACGCTGCTC GTCAATGATGTTGAACTTAGCATCCCACAAGGCACGCCAGCGGCCTATCTTGCAGAGCTCATCGGTAGTAACCTTTCACC AACAGGTTATTGA
Upstream 100 bases:
>100_bases TAATATGGTGTTCAAAGCCGTAAGCGTATCATAAACCCCACATTCTAATCGCCAAGTACGAATAATAAGATCAAGTCTCC AACCAAAAGGAGATTTTATA
Downstream 100 bases:
>100_bases TTAAGCGTTTGCGTAAAAACTAGCTTCGTTAAGGTCGAAGACATTGGGGGATGGTTGCTGTGAGATCACAGCAGCTACAA TGCGAGTTAGAGTTTCGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MAKRRSNQEWQALLEQYEISNITQRVFCEQHGLSLSTFFAKRRQLQTAIRPTPVGFVRVEVVEKTTKYQAQIATANMTLL VNDVELSIPQGTPAAYLAELIGSNLSPTGY
Sequences:
>Translated_110_residues MAKRRSNQEWQALLEQYEISNITQRVFCEQHGLSLSTFFAKRRQLQTAIRPTPVGFVRVEVVEKTTKYQAQIATANMTLL VNDVELSIPQGTPAAYLAELIGSNLSPTGY >Mature_109_residues AKRRSNQEWQALLEQYEISNITQRVFCEQHGLSLSTFFAKRRQLQTAIRPTPVGFVRVEVVEKTTKYQAQIATANMTLLV NDVELSIPQGTPAAYLAELIGSNLSPTGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12373; Mature: 12242
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKRRSNQEWQALLEQYEISNITQRVFCEQHGLSLSTFFAKRRQLQTAIRPTPVGFVRVE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEE VVEKTTKYQAQIATANMTLLVNDVELSIPQGTPAAYLAELIGSNLSPTGY EHHHHHHHHHEEEECCEEEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AKRRSNQEWQALLEQYEISNITQRVFCEQHGLSLSTFFAKRRQLQTAIRPTPVGFVRVE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEE VVEKTTKYQAQIATANMTLLVNDVELSIPQGTPAAYLAELIGSNLSPTGY EHHHHHHHHHEEEECCEEEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA