Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is 37680346
Identifier: 37680346
GI number: 37680346
Start: 2173600
End: 2174412
Strand: Direct
Name: 37680346
Synonym: VV2162
Alternate gene names: NA
Gene position: 2173600-2174412 (Clockwise)
Preceding gene: 37680345
Following gene: 37680347
Centisome position: 64.8
GC content: 41.08
Gene sequence:
>813_bases ATGAGGTGCGCACACTGGTCTCTATGTCTTCGGATGTGGTTAATGGAGAGATTTATCTCAAAGAAAAAAATCAAACCATC ATCTCGAAAATTATCGAATATGCCCAAAATCATCAACTATCGGCGGATCCTTCCCTTACCAAAGAAGAGGAGCGAATGCT CACAAATACGGGCCTTTCCAAAGAAGCCTACCTTGCCGCCAAGAATCAATCTAACCAGTAATAGGATGAAGACAATGAAC AAACAAGCGCTAGTCGAAACACTGAACAAACTTAGCCACGACTTTTCCTCTGAGATTCAAGATACGAAGCAAAAAAAGGA AAAACTGGCCATCTACCGTTCTGAGTTGGCGAAAATGGATCTAGCTATCTCCGCTCTTAATCAAGACATCAGTAAAGAAT TGGATTTCGACAAGTTAAAAGACTTGAAGGGTCAGTTGAAGACTAAAGAGCAAGAACACAGCGAGATGTCCTCAATCATC ATTAATTTAACCAGTTACACTTCCGATTCTAACTACAGCGAGCGCTTAGATAAGATTCGTAAAATGCATAAAGAAGCGGA AAAAGATTTTTATGAGTACGTAATGGCGAGTTGTCGCGAAAAAATTACAGATGTAGTCAGTCAACATGAAGAACTGCTTC CTCTGATCCGTGATTACGTGGTGGCGAGCGTGGGGGTTCGAAATCCCAATCCTGTCTATCACTATGGTGCACCATTCATT GATATTTTTGGTCCTTTTATGGGTGACGAATGGGTAGAACACAAAACATCACTTCTTCATGAAGCGGGTGTGAACGATCT TTCTCATTGTTAA
Upstream 100 bases:
>100_bases CTCCGTTACTCTGGTGTGTCAGAGCAAGAATACATTGCAGCAAAGCGTGCCCTTGTCGCAGAAGACCCTTATTTAGCCAC ACTAAATCAATTGACACCCG
Downstream 100 bases:
>100_bases GTGATTACGTTGAAAATTCTTAAATAGAGGTCTGTATGTTTGTTTTAGAAAAGAACCGTTTCGTCAAAAATTGGCCCGTA GATGTTGTGCTTCCAGTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MRCAHWSLCLRMWLMERFISKKKIKPSSRKLSNMPKIINYRRILPLPKKRSECSQIRAFPKKPTLPPRINLTSNRMKTMN KQALVETLNKLSHDFSSEIQDTKQKKEKLAIYRSELAKMDLAISALNQDISKELDFDKLKDLKGQLKTKEQEHSEMSSII INLTSYTSDSNYSERLDKIRKMHKEAEKDFYEYVMASCREKITDVVSQHEELLPLIRDYVVASVGVRNPNPVYHYGAPFI DIFGPFMGDEWVEHKTSLLHEAGVNDLSHC
Sequences:
>Translated_270_residues MRCAHWSLCLRMWLMERFISKKKIKPSSRKLSNMPKIINYRRILPLPKKRSECSQIRAFPKKPTLPPRINLTSNRMKTMN KQALVETLNKLSHDFSSEIQDTKQKKEKLAIYRSELAKMDLAISALNQDISKELDFDKLKDLKGQLKTKEQEHSEMSSII INLTSYTSDSNYSERLDKIRKMHKEAEKDFYEYVMASCREKITDVVSQHEELLPLIRDYVVASVGVRNPNPVYHYGAPFI DIFGPFMGDEWVEHKTSLLHEAGVNDLSHC >Mature_270_residues MRCAHWSLCLRMWLMERFISKKKIKPSSRKLSNMPKIINYRRILPLPKKRSECSQIRAFPKKPTLPPRINLTSNRMKTMN KQALVETLNKLSHDFSSEIQDTKQKKEKLAIYRSELAKMDLAISALNQDISKELDFDKLKDLKGQLKTKEQEHSEMSSII INLTSYTSDSNYSERLDKIRKMHKEAEKDFYEYVMASCREKITDVVSQHEELLPLIRDYVVASVGVRNPNPVYHYGAPFI DIFGPFMGDEWVEHKTSLLHEAGVNDLSHC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31492; Mature: 31492
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCAHWSLCLRMWLMERFISKKKIKPSSRKLSNMPKIINYRRILPLPKKRSECSQIRAFP CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHCCC KKPTLPPRINLTSNRMKTMNKQALVETLNKLSHDFSSEIQDTKQKKEKLAIYRSELAKMD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAISALNQDISKELDFDKLKDLKGQLKTKEQEHSEMSSIIINLTSYTSDSNYSERLDKIR HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH KMHKEAEKDFYEYVMASCREKITDVVSQHEELLPLIRDYVVASVGVRNPNPVYHYGAPFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHH DIFGPFMGDEWVEHKTSLLHEAGVNDLSHC HHHHHHHCHHHHHHHHHHHHHHCCCHHCCC >Mature Secondary Structure MRCAHWSLCLRMWLMERFISKKKIKPSSRKLSNMPKIINYRRILPLPKKRSECSQIRAFP CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHCCC KKPTLPPRINLTSNRMKTMNKQALVETLNKLSHDFSSEIQDTKQKKEKLAIYRSELAKMD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAISALNQDISKELDFDKLKDLKGQLKTKEQEHSEMSSIIINLTSYTSDSNYSERLDKIR HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH KMHKEAEKDFYEYVMASCREKITDVVSQHEELLPLIRDYVVASVGVRNPNPVYHYGAPFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHH DIFGPFMGDEWVEHKTSLLHEAGVNDLSHC HHHHHHHCHHHHHHHHHHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA