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The map label for this gene is 37680288

Identifier: 37680288

GI number: 37680288

Start: 2112867

End: 2113352

Strand: Direct

Name: 37680288

Synonym: VV2104

Alternate gene names: NA

Gene position: 2112867-2113352 (Clockwise)

Preceding gene: 37680285

Following gene: 37680296

Centisome position: 62.99

GC content: 48.35

Gene sequence:

>486_bases
GTGGAAAAACATGAAGAAGTCCTGATCGCAATTCGTCAAATCATTCGCGCGATCGATCTCCATTCAAAGAAACTGAACAA
GGTGTCTGGGCTTACCGCGCCACAGCTTATCTTGATGCGGGCCATAAAAGATCTGGGTGAGGTGACCATCCGTCAGTTGT
CTAATCACACCAACATGAGCCAAGCCACCGCAACCACTATCCTTGATCGCCTCGAAAGGAATGGTCATGTGCAGCGTGTA
CGTAGCCAAGAAGACAAGCGAAAGGTCCACGCGATATTGACAGAATCAGGAACAGCGCTGCTAGCACAAGCACCGATGCC
ATTGCAAGAAAACTTTGTGACTGAATTTCAAAAACTGCAGGAGTGGGAGCAGTCGTTGCTACTCTCTTCGGTGCAACGCA
TCTCTAGCATGATGAGTGCGGAGCAAATAGACGTTGCGCCTATTCTTGAAATTGGCAATATCGCCAAAACCGAGCAAGAG
TCTTAA

Upstream 100 bases:

>100_bases
GCGTCCCCTTGATGTATAAGGGATTCAACGAATTAAGGTCGAGTCAATCGCGATATGTGCAAATCACCCCCAACAGAAAA
AATCGGATAGGCTGGCCATA

Downstream 100 bases:

>100_bases
CACGGCGAGCCCATTGCAGGCATGTTTTTCAAAGAGGCCACGAGATTTGCAACATTGAATAGGGGTGCTCCCCCCTATTC
AATCAGCCCTTGCTCTAGCG

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; Transcriptional Regulator TrmB; Regulatory Protein MarR; Transcriptional Regulator Of MarR Family Protein; Transcriptional Regulator MarR Family Protein; HTH-Type Transcriptional Regulator; MarR Family Regulatory Protein; MarR-Family Transcriptional Regulator; Transcriptional Regulator BlaI/MecI/CopY Family; MarR Family Transcription Regulator; MarR Family Regulatory Helix-Turn-Helix

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MEKHEEVLIAIRQIIRAIDLHSKKLNKVSGLTAPQLILMRAIKDLGEVTIRQLSNHTNMSQATATTILDRLERNGHVQRV
RSQEDKRKVHAILTESGTALLAQAPMPLQENFVTEFQKLQEWEQSLLLSSVQRISSMMSAEQIDVAPILEIGNIAKTEQE
S

Sequences:

>Translated_161_residues
MEKHEEVLIAIRQIIRAIDLHSKKLNKVSGLTAPQLILMRAIKDLGEVTIRQLSNHTNMSQATATTILDRLERNGHVQRV
RSQEDKRKVHAILTESGTALLAQAPMPLQENFVTEFQKLQEWEQSLLLSSVQRISSMMSAEQIDVAPILEIGNIAKTEQE
S
>Mature_161_residues
MEKHEEVLIAIRQIIRAIDLHSKKLNKVSGLTAPQLILMRAIKDLGEVTIRQLSNHTNMSQATATTILDRLERNGHVQRV
RSQEDKRKVHAILTESGTALLAQAPMPLQENFVTEFQKLQEWEQSLLLSSVQRISSMMSAEQIDVAPILEIGNIAKTEQE
S

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18158; Mature: 18158

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKHEEVLIAIRQIIRAIDLHSKKLNKVSGLTAPQLILMRAIKDLGEVTIRQLSNHTNMS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHH
QATATTILDRLERNGHVQRVRSQEDKRKVHAILTESGTALLAQAPMPLQENFVTEFQKLQ
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHH
EWEQSLLLSSVQRISSMMSAEQIDVAPILEIGNIAKTEQES
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MEKHEEVLIAIRQIIRAIDLHSKKLNKVSGLTAPQLILMRAIKDLGEVTIRQLSNHTNMS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHH
QATATTILDRLERNGHVQRVRSQEDKRKVHAILTESGTALLAQAPMPLQENFVTEFQKLQ
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHH
EWEQSLLLSSVQRISSMMSAEQIDVAPILEIGNIAKTEQES
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA