Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is 37680284
Identifier: 37680284
GI number: 37680284
Start: 2106135
End: 2108012
Strand: Direct
Name: 37680284
Synonym: VV2100
Alternate gene names: NA
Gene position: 2106135-2108012 (Clockwise)
Preceding gene: 37680282
Following gene: 37680285
Centisome position: 62.79
GC content: 49.41
Gene sequence:
>1878_bases ATGGAAGCAGAATTAAGCGACATTCTTCACTTTCTTTCCCTTCACTCGCCCTTCAGCGAACTGCCTCATGAAACATTGGA GTACGTCGCCCATCACATCGAGATTGGCTACTACCGCAGCCAAACCCCCATCATTAACGCGGGTGACGAGATCCACGAAC TGTTTCTGGTCAGAAGCGGTGTGGTGGAAGTGTACCGCCGAAATGGCGAACTCTATAACCGTCTCGATGAGGGGGCACTG TTTGGGCAAATGGGCCTGTTGACCAATAACCGTGTTCGCTTCCCCGTAACGGCAATCAAAGATTGCTTGGTGTACACCAT TCCTGAAGCGATATTTCAGCAGTTGTATGAACAGCACGATTGCTTCGCTGACTTTGTGGAAGTGGAACAAACCACACGAC TTCGCCAAGCGGTGAAAGGGGTAAATGAGGCCAATGATCTCACCACCTCCAAAGTGCGCACCCTACTCAATCGGACCGCC CCCACCATTGATGCCAGCGCGACCATTCAAACCGCAGCGCAAAGAATGGCCGATGAACAAGTCTCTTCGCTTTTGGTGTT ACAAACAGCCGATGAAGAAAACCGTGATCCTATCGCAGGTATCGTTACCGACCGAGATTTATGCACTCGTGTTGTGGCTC AAGGAAAATCCCCCAACGAGGCCGTGGCATCGGTTATGACGCCACAGGTGATTCGATTGGATCACAATGCCTACGTCTAT GAAGCGATGCTCACGATGTTACGCCATAACGTTCATCACTTACCCATTTTGCAAGGCGACCGACTGCTGGGCATTATTGA AGCCACCGACATTGTCCGTTATGAATCGCAAAACTCTCTGCTGCTCGTTAGCCGGATATTCCAACAGCAAAGTTTTGAAG GCTTGGCCCAAATCGCTCAAGAGGTCAAAGCCAGTTTCGTGCGTTTGGTCAACGAGGATGCCAACTCACATATGGTCGGC AGTGCGATGTCGGTGATTGGACGAAGCTTTAAGCAGCGTATTATCGAACTGGCTGAGGAAGAATTGGGGCCTCCCCCCAT CCGATACTGTTTTTTGGCGCTGGGTTCGATGGGACGGGACGAGCAACTGCTGGTGACCGATCAAGATAACGCGATTATTT TGGATGACAGCTATCAAGAAAGCGTGCACGGTCAATACTTTGAACAACTGGCTCATATCGTCTGTGATGCGCTCAATGAA TGCGGCTATCAGTATTGCACTGGTGATATTATGGCTACGAATCCGATCTGGCGTATGACTAAGGCCCAATGGCGAGATTG CTTTGCCGATTGGATTGACGATCCTAATCCCAAAGCGCTGCTCAACGCATCGATTTTCTTTGACCTTGACGGTGTGTCCG GCCAAGTCGCATGGGCGGACCAACTGACCGAGTTTGTCGTCAAACGTGCCAAAGGCAATCCACGCTTTTTGGCTTGTTTA GCAAGAAACGCCTTGAATCGCACACCACCGTTGGGATTTTTCAAAGATTTTGTGATGGAAAAAGACGGTCGACATAACAA CTCGATCAACTTAAAACGTCGAGGTACCGCACCTTTGGCCGATTTGATTCGTGTGCACGCGCTTGCCGTCGGTTCAACGG CGAAAAACTCCTTTGAACGTCTTGATGACATTATCGATGCGGGCATATTGCCTAAAGGTCGTGCGCAAAATCTTAAAGAT GCCTTGGAGTTCATCTCCATGGTACGGATCCGCCATCAAGCTATTGATGTGGCAAATGACAATGAACCCGACAACAACAT TGAGCCGGAAAATCTGTCCGACTTTGAACGCCGAACGTTAAAAGATGCGTTTCAGATTTTGAGTAACGCGCAGAATTTCC TGAAGTTTCGTTACCAAGCCTCCAGCCATTTTAAGTAG
Upstream 100 bases:
>100_bases ATTTGGCTTATTGCATTTAGCTCAAAGCACAATTGCGCTACCATGGAGTGCTTATGCGTACAACGGGTCACCATAGGCTC AAAACCCAAAAGGTTTGATT
Downstream 100 bases:
>100_bases CTTATGATCTCTTTACTCAAACCCACCAAGCTTGAATGGCAGCACAAATTCCTGCAAAAGCAGCAGCGAGTTGCCGATGC GCGCTTGCGCCGATTTTATC
Product: signal-transduction protein
Products: NA
Alternate protein names: Signal-Transduction Protein; Nucleotidyltransferase; Signal Transduction Protein; Signal Transduction Protein With CBS Domains; Signal-Transduction Protein With CBS Domains; Nucleotidyltransferase Family; CBS Domain Protein; Signal Protein; Inosine-5-Monophosphate Dehydrogenase; Nucleotidyltransferase Domain Family Protein; DNA Polymerase III Subunit Epsilon; CBS Signal-Transduction Protein; Cyclic-Nucleotide Signal Transduction Protein; Multidomain-Containing Protein; Cyclic Nucleotide-Regulated Nucleotidyltransferase; Methyl-Accepting Chemotaxis Protein A; Nucleotidyltransferases
Number of amino acids: Translated: 625; Mature: 625
Protein sequence:
>625_residues MEAELSDILHFLSLHSPFSELPHETLEYVAHHIEIGYYRSQTPIINAGDEIHELFLVRSGVVEVYRRNGELYNRLDEGAL FGQMGLLTNNRVRFPVTAIKDCLVYTIPEAIFQQLYEQHDCFADFVEVEQTTRLRQAVKGVNEANDLTTSKVRTLLNRTA PTIDASATIQTAAQRMADEQVSSLLVLQTADEENRDPIAGIVTDRDLCTRVVAQGKSPNEAVASVMTPQVIRLDHNAYVY EAMLTMLRHNVHHLPILQGDRLLGIIEATDIVRYESQNSLLLVSRIFQQQSFEGLAQIAQEVKASFVRLVNEDANSHMVG SAMSVIGRSFKQRIIELAEEELGPPPIRYCFLALGSMGRDEQLLVTDQDNAIILDDSYQESVHGQYFEQLAHIVCDALNE CGYQYCTGDIMATNPIWRMTKAQWRDCFADWIDDPNPKALLNASIFFDLDGVSGQVAWADQLTEFVVKRAKGNPRFLACL ARNALNRTPPLGFFKDFVMEKDGRHNNSINLKRRGTAPLADLIRVHALAVGSTAKNSFERLDDIIDAGILPKGRAQNLKD ALEFISMVRIRHQAIDVANDNEPDNNIEPENLSDFERRTLKDAFQILSNAQNFLKFRYQASSHFK
Sequences:
>Translated_625_residues MEAELSDILHFLSLHSPFSELPHETLEYVAHHIEIGYYRSQTPIINAGDEIHELFLVRSGVVEVYRRNGELYNRLDEGAL FGQMGLLTNNRVRFPVTAIKDCLVYTIPEAIFQQLYEQHDCFADFVEVEQTTRLRQAVKGVNEANDLTTSKVRTLLNRTA PTIDASATIQTAAQRMADEQVSSLLVLQTADEENRDPIAGIVTDRDLCTRVVAQGKSPNEAVASVMTPQVIRLDHNAYVY EAMLTMLRHNVHHLPILQGDRLLGIIEATDIVRYESQNSLLLVSRIFQQQSFEGLAQIAQEVKASFVRLVNEDANSHMVG SAMSVIGRSFKQRIIELAEEELGPPPIRYCFLALGSMGRDEQLLVTDQDNAIILDDSYQESVHGQYFEQLAHIVCDALNE CGYQYCTGDIMATNPIWRMTKAQWRDCFADWIDDPNPKALLNASIFFDLDGVSGQVAWADQLTEFVVKRAKGNPRFLACL ARNALNRTPPLGFFKDFVMEKDGRHNNSINLKRRGTAPLADLIRVHALAVGSTAKNSFERLDDIIDAGILPKGRAQNLKD ALEFISMVRIRHQAIDVANDNEPDNNIEPENLSDFERRTLKDAFQILSNAQNFLKFRYQASSHFK >Mature_625_residues MEAELSDILHFLSLHSPFSELPHETLEYVAHHIEIGYYRSQTPIINAGDEIHELFLVRSGVVEVYRRNGELYNRLDEGAL FGQMGLLTNNRVRFPVTAIKDCLVYTIPEAIFQQLYEQHDCFADFVEVEQTTRLRQAVKGVNEANDLTTSKVRTLLNRTA PTIDASATIQTAAQRMADEQVSSLLVLQTADEENRDPIAGIVTDRDLCTRVVAQGKSPNEAVASVMTPQVIRLDHNAYVY EAMLTMLRHNVHHLPILQGDRLLGIIEATDIVRYESQNSLLLVSRIFQQQSFEGLAQIAQEVKASFVRLVNEDANSHMVG SAMSVIGRSFKQRIIELAEEELGPPPIRYCFLALGSMGRDEQLLVTDQDNAIILDDSYQESVHGQYFEQLAHIVCDALNE CGYQYCTGDIMATNPIWRMTKAQWRDCFADWIDDPNPKALLNASIFFDLDGVSGQVAWADQLTEFVVKRAKGNPRFLACL ARNALNRTPPLGFFKDFVMEKDGRHNNSINLKRRGTAPLADLIRVHALAVGSTAKNSFERLDDIIDAGILPKGRAQNLKD ALEFISMVRIRHQAIDVANDNEPDNNIEPENLSDFERRTLKDAFQILSNAQNFLKFRYQASSHFK
Specific function: Unknown
COG id: COG2905
COG function: function code T; Predicted signal-transduction protein containing cAMP-binding and CBS domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70525; Mature: 70525
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAELSDILHFLSLHSPFSELPHETLEYVAHHIEIGYYRSQTPIINAGDEIHELFLVRSG CCCHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHCEEECCCCEECCCHHHHHHHHHHHH VVEVYRRNGELYNRLDEGALFGQMGLLTNNRVRFPVTAIKDCLVYTIPEAIFQQLYEQHD HHHHHHHCCHHHHHHHCCHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHH CFADFVEVEQTTRLRQAVKGVNEANDLTTSKVRTLLNRTAPTIDASATIQTAAQRMADEQ HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH VSSLLVLQTADEENRDPIAGIVTDRDLCTRVVAQGKSPNEAVASVMTPQVIRLDHNAYVY HHHEEEEEECCCCCCCCCEEEECCHHHHHHHHHCCCCCHHHHHHHCCCCEEEECCCHHHH EAMLTMLRHNVHHLPILQGDRLLGIIEATDIVRYESQNSLLLVSRIFQQQSFEGLAQIAQ HHHHHHHHCCCCCCCEECCCCEEEEEEHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHH EVKASFVRLVNEDANSHMVGSAMSVIGRSFKQRIIELAEEELGPPPIRYCFLALGSMGRD HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC EQLLVTDQDNAIILDDSYQESVHGQYFEQLAHIVCDALNECGYQYCTGDIMATNPIWRMT CEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCEEECCCHHHHH KAQWRDCFADWIDDPNPKALLNASIFFDLDGVSGQVAWADQLTEFVVKRAKGNPRFLACL HHHHHHHHHHHCCCCCCHHEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHH ARNALNRTPPLGFFKDFVMEKDGRHNNSINLKRRGTAPLADLIRVHALAVGSTAKNSFER HHHHHCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHH LDDIIDAGILPKGRAQNLKDALEFISMVRIRHQAIDVANDNEPDNNIEPENLSDFERRTL HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH KDAFQILSNAQNFLKFRYQASSHFK HHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MEAELSDILHFLSLHSPFSELPHETLEYVAHHIEIGYYRSQTPIINAGDEIHELFLVRSG CCCHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHCEEECCCCEECCCHHHHHHHHHHHH VVEVYRRNGELYNRLDEGALFGQMGLLTNNRVRFPVTAIKDCLVYTIPEAIFQQLYEQHD HHHHHHHCCHHHHHHHCCHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHH CFADFVEVEQTTRLRQAVKGVNEANDLTTSKVRTLLNRTAPTIDASATIQTAAQRMADEQ HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH VSSLLVLQTADEENRDPIAGIVTDRDLCTRVVAQGKSPNEAVASVMTPQVIRLDHNAYVY HHHEEEEEECCCCCCCCCEEEECCHHHHHHHHHCCCCCHHHHHHHCCCCEEEECCCHHHH EAMLTMLRHNVHHLPILQGDRLLGIIEATDIVRYESQNSLLLVSRIFQQQSFEGLAQIAQ HHHHHHHHCCCCCCCEECCCCEEEEEEHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHH EVKASFVRLVNEDANSHMVGSAMSVIGRSFKQRIIELAEEELGPPPIRYCFLALGSMGRD HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC EQLLVTDQDNAIILDDSYQESVHGQYFEQLAHIVCDALNECGYQYCTGDIMATNPIWRMT CEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCEEECCCHHHHH KAQWRDCFADWIDDPNPKALLNASIFFDLDGVSGQVAWADQLTEFVVKRAKGNPRFLACL HHHHHHHHHHHCCCCCCHHEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHH ARNALNRTPPLGFFKDFVMEKDGRHNNSINLKRRGTAPLADLIRVHALAVGSTAKNSFER HHHHHCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHH LDDIIDAGILPKGRAQNLKDALEFISMVRIRHQAIDVANDNEPDNNIEPENLSDFERRTL HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH KDAFQILSNAQNFLKFRYQASSHFK HHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA