Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
---|---|
Accession | NC_005139 |
Length | 3,354,505 |
Click here to switch to the map view.
The map label for this gene is 37680271
Identifier: 37680271
GI number: 37680271
Start: 2094942
End: 2095409
Strand: Direct
Name: 37680271
Synonym: VV2087
Alternate gene names: NA
Gene position: 2094942-2095409 (Clockwise)
Preceding gene: 37680270
Following gene: 37680273
Centisome position: 62.45
GC content: 43.38
Gene sequence:
>468_bases ATGATTGCAATAAAGCCTACTAAGCTACGAGATTTCGCCAGCTTGATGCAATTGGATGTGCATGAAGAACAAAAAGGATT TTTTAAGCCTTTTGAGCAGGCTTATCAAAAACGCCATAAGTCCGAAGCGTTTTTTACGATTTATTCGGACAGTTCGACGG TTGGTTATTTGGTCATTGATAAAGGGTTTTCTCAGCACGCGCCATTTGCCAAACGCCATGAGCTGGGGCTGAACTACCTG ATGATTGATCGTCAATACCAACGTCAAGGTATAGGGACTGAGGCACTGAAAAAGCTGTTTGTGTATGCGTACACCATTGA TCCAGAGAGTAATTCTCTTTGCCTGACTGTGCCAAACAGCCACAAAACGGCCAATCAGTTTTTCCTCTCTGCTGGCTTTA CCAATACCGATAAAGTCATCTATGGCGAAGTAGAAAAAGAGTGGATTTTACGCCACCCACTGGGATAA
Upstream 100 bases:
>100_bases AGTAATGAAGCCAATTATGAATACAATCAAATACCTAGACGATAGCATTGATTGGAATTTATAATGCAGCCTCGCACTTA TCGTTTCGCTATTTACTGTC
Downstream 100 bases:
>100_bases ACGTTTTAACCCAGCCCAGAAACAACAAAGGCAAGCTTGATGCTTGCCTTTGTTTCAATTTGCTAAAGGAGATTACTCAC CTTTGTAGATGCAGCCTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: GCN5-Related N-Acetyltransferase; Histone Acetyltransferase HPA2-Like Acetyltransferase
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MIAIKPTKLRDFASLMQLDVHEEQKGFFKPFEQAYQKRHKSEAFFTIYSDSSTVGYLVIDKGFSQHAPFAKRHELGLNYL MIDRQYQRQGIGTEALKKLFVYAYTIDPESNSLCLTVPNSHKTANQFFLSAGFTNTDKVIYGEVEKEWILRHPLG
Sequences:
>Translated_155_residues MIAIKPTKLRDFASLMQLDVHEEQKGFFKPFEQAYQKRHKSEAFFTIYSDSSTVGYLVIDKGFSQHAPFAKRHELGLNYL MIDRQYQRQGIGTEALKKLFVYAYTIDPESNSLCLTVPNSHKTANQFFLSAGFTNTDKVIYGEVEKEWILRHPLG >Mature_155_residues MIAIKPTKLRDFASLMQLDVHEEQKGFFKPFEQAYQKRHKSEAFFTIYSDSSTVGYLVIDKGFSQHAPFAKRHELGLNYL MIDRQYQRQGIGTEALKKLFVYAYTIDPESNSLCLTVPNSHKTANQFFLSAGFTNTDKVIYGEVEKEWILRHPLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17904; Mature: 17904
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAIKPTKLRDFASLMQLDVHEEQKGFFKPFEQAYQKRHKSEAFFTIYSDSSTVGYLVID CEECCCCCHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHCCCCEEEEEEECCCEEEEEEEE KGFSQHAPFAKRHELGLNYLMIDRQYQRQGIGTEALKKLFVYAYTIDPESNSLCLTVPNS CCCCCCCCCCHHHHCCCEEEEEECHHHHCCCCHHHHHHHEEEEEEECCCCCEEEEECCCC HKTANQFFLSAGFTNTDKVIYGEVEKEWILRHPLG CCCHHHEEEECCCCCCCEEEECCCCHHHHCCCCCC >Mature Secondary Structure MIAIKPTKLRDFASLMQLDVHEEQKGFFKPFEQAYQKRHKSEAFFTIYSDSSTVGYLVID CEECCCCCHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHCCCCEEEEEEECCCEEEEEEEE KGFSQHAPFAKRHELGLNYLMIDRQYQRQGIGTEALKKLFVYAYTIDPESNSLCLTVPNS CCCCCCCCCCHHHHCCCEEEEEECHHHHCCCCHHHHHHHEEEEEEECCCCCEEEEECCCC HKTANQFFLSAGFTNTDKVIYGEVEKEWILRHPLG CCCHHHEEEECCCCCCCEEEECCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA