Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is 37680216
Identifier: 37680216
GI number: 37680216
Start: 2029401
End: 2029949
Strand: Direct
Name: 37680216
Synonym: VV2032
Alternate gene names: NA
Gene position: 2029401-2029949 (Clockwise)
Preceding gene: 37680212
Following gene: 37680228
Centisome position: 60.5
GC content: 47.91
Gene sequence:
>549_bases GTGATGTTGATTAATCTGGTCTTACACTCATATTTCGATACTTTTTTAGGACGACTTATGGCCAAAGCGAAAGGCTTTAC TCTCATCGAACTGGTGGTGACGCTGGTTATCATTGGTATTATTGCGGTTACCGCAGCAGCGCGATTTCTGGATATTCAGA CGGATGCTCGTATTGCGGTGCTCCAAGGCGCGAGAACGGCACTAGAAACGGCCAATACGCAAGTCTACACCAAAGCCATT TTGCAAAACCAAGAGTCCGTCAATGCGCAGTTGGCTCCGAATATCGATCTGGACGGGGATGGTCATCCCGATCTCATTGG CTATTTTGGCCTGATCAAATACGTTATTCCGGCACAAGATCTTGCAGGGCTCGACCCTAAACTCACCATCAATAAATGGT ATGGTGTGGATAACCCGGCCGAACCCTATTTTTTAATTGGGTTTGCGAACAAGCCTGTCGGTCCTACCCATCTGTGCTAC GTTGAAGTGTTTTACCCCGCCAGTGCGGGAGGTGATGTCACCTATCAATTGCAAACTGCGCACTGTTAA
Upstream 100 bases:
>100_bases TTTAATCACTTAAGCATCAATTAAAACCGCAAAAGAAAAGCTTTGATTCACGTTCTAAAAATGTTGTTGATTCAAGTGTG GTTTTTCTCAGATATGAAAC
Downstream 100 bases:
>100_bases ACGCAAAGCAAATAAAAAAAAAACCAAAAGGCTCGGTGCCGTTTGAGGTGTTTTTTTTTGCTGAAAGGCGTTATTGAATG CTCAACTGAGAAAGTCGATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MMLINLVLHSYFDTFLGRLMAKAKGFTLIELVVTLVIIGIIAVTAAARFLDIQTDARIAVLQGARTALETANTQVYTKAI LQNQESVNAQLAPNIDLDGDGHPDLIGYFGLIKYVIPAQDLAGLDPKLTINKWYGVDNPAEPYFLIGFANKPVGPTHLCY VEVFYPASAGGDVTYQLQTAHC
Sequences:
>Translated_182_residues MMLINLVLHSYFDTFLGRLMAKAKGFTLIELVVTLVIIGIIAVTAAARFLDIQTDARIAVLQGARTALETANTQVYTKAI LQNQESVNAQLAPNIDLDGDGHPDLIGYFGLIKYVIPAQDLAGLDPKLTINKWYGVDNPAEPYFLIGFANKPVGPTHLCY VEVFYPASAGGDVTYQLQTAHC >Mature_182_residues MMLINLVLHSYFDTFLGRLMAKAKGFTLIELVVTLVIIGIIAVTAAARFLDIQTDARIAVLQGARTALETANTQVYTKAI LQNQESVNAQLAPNIDLDGDGHPDLIGYFGLIKYVIPAQDLAGLDPKLTINKWYGVDNPAEPYFLIGFANKPVGPTHLCY VEVFYPASAGGDVTYQLQTAHC
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19814; Mature: 19814
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLINLVLHSYFDTFLGRLMAKAKGFTLIELVVTLVIIGIIAVTAAARFLDIQTDARIAV CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEE LQGARTALETANTQVYTKAILQNQESVNAQLAPNIDLDGDGHPDLIGYFGLIKYVIPAQD ECCCHHHHHHCCHHHHHHHHHCCHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCHH LAGLDPKLTINKWYGVDNPAEPYFLIGFANKPVGPTHLCYVEVFYPASAGGDVTYQLQTA HCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEEEEECCCCCCCEEEEEEEC HC CC >Mature Secondary Structure MMLINLVLHSYFDTFLGRLMAKAKGFTLIELVVTLVIIGIIAVTAAARFLDIQTDARIAV CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEE LQGARTALETANTQVYTKAILQNQESVNAQLAPNIDLDGDGHPDLIGYFGLIKYVIPAQD ECCCHHHHHHCCHHHHHHHHHCCHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCHH LAGLDPKLTINKWYGVDNPAEPYFLIGFANKPVGPTHLCYVEVFYPASAGGDVTYQLQTA HCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEEEEECCCCCCCEEEEEEEC HC CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA