| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is dnaK [H]
Identifier: 37680210
GI number: 37680210
Start: 2022472
End: 2025279
Strand: Direct
Name: dnaK [H]
Synonym: VV2026
Alternate gene names: 37680210
Gene position: 2022472-2025279 (Clockwise)
Preceding gene: 37680209
Following gene: 37680212
Centisome position: 60.29
GC content: 51.78
Gene sequence:
>2808_bases ATGGCATCTCCTCGCTATCTTGTCGGCATTGACTTAGGCACCACCAACACGGTGGTTGCGTTTTGTGAACTGACCGAGAA CTTACAACAATCCAACGTCTCCCTTTTCGATATTGACCAGCTTATCGGCCCCGGTGAAGTGGTTCGTAAGCCGCTACTGC CCTCTTTCCGCTACCACCCTGCCAACGGGCAAATCGCCCCTGCCGATCTCACCTTGCCGTGGGAAAACCAAACTGTGGCT GGCGACATTGCTAATGTGATCATTGGTGAATGGGCGCGTGAACTGGGCGCAAAGGTAGAAGGGCGTCAGGTTTCAAGCGC TAAGAGCTGGCTGTCTCACCAAGCGGTTGATCGCCATTCAGACATACTGCCGTGGGCTGGGGTTAGCGATGTTGAGAAGG TTTCCCCTGTTATTGCCAGTGCCAGTTACCTTAATCACATTCGCCAAGCATGGAATCATCGCCACCCGGGCAATCTGCTC GAAGATCAAGAGGTGGTGGTCACCGTACCGGCTTCGTTTGATGAAACTGCACGTAAGCTGACCCTCGAAGCCGCTCAACT GGCAGGCTTAAGCCAAGTGCTTCTGCTCGAAGAGCCTCAAGCGGTTTGTTACGACTGGTATGCTCGCCACCAGCACAGTG CCGCAGAATTATTAAAAGAAATCCCGCTGATTTTGGTGTGTGATGTCGGCGGCGGTACCACCGACTTAAGCTTGATTGAA GCAAAATTTAACCAAGACGCCCTCGCCTTGGATCGCATCGGGGTTGGTGAACACCTCATGCTCGGTGGTGATAACCTGGA TTTGGCCCTCGCGCATTTAGCGGAGCAGCGTTTTAATCAAAGCAAAAAACTCAATGCGGCCAGCCTCACCAAACTGATTC AGCAAACTCGCAAAGCCAAAGAGCAACTCCTCTCGAGTACAGCGCCGGAAGAAGTGAAGATCACCATGTTGGGCAGCGGT TCCAAACTGCTTGGTGGCACCAAAAGCATCGCGTTGAACAAACAAGAAGTTTATCAAATCGCCCTCGACGGCTTCTTCCC TCTTTCTGATTTTGCTCAAACGCCGGATAAACGCCGCAGCGCCGTGGTCGAATTTGGTTTGCCTTATGTCGCCGACCCCG CGGTGAGCAAACACGTGGCCGAGTTTTTATCTCAGCACCAACAAGTCTCTCACGCTGCGTTAGGACAATCAGAAAGTGAT CAGCCCGCCATTCCGGTAGGTCTGTTGCTGAACGGCGGCGTGTTTAACAGTGACCTCGTCACTGCGCGGATGACCGAGTT GCTCGGTCGCTGGCGCGGCGCACCGGTCACCGTCCTTGATAACCCGCATCCAGATTGGTCTGTGGCATTAGGCGCTGTCG CATTTGCCAAAGCCCGCCGCGGTGCACAACTCAAAATCGGCGGCGGTTCTGCTCGGTCTTACTTTTTGCATCTGCAAGAA AAAAACAAAATGGGTAAAGCGCTCTGTTTGCTTGCAAAAGGCACCGAAGAAGGGCAAGAAATTCGTCTCACTGGACGACG TTTCTCGCTCACCCTTGGCGAACCCGTACGCTTTAACCTGCTCACGTCAACGCACGATGCCTTGTCCCACCATGTGGCGA TTCAAAACGGCGTCATGGCGGATATCGACCCTGATATCTTCACCCCACTTCCCCCATATATCGTTACATTGCAAGGGGAA GGCGCAGAATTAGAAGCCAATCAAAAAGAGCGTGTGGAAGTTCAACTTGCCTGCCAATTGACCGAAGTCGGCACCCTGAA AATGGAGTGCGTCAGTGTCGAAGAGGAGGACAAACGTTGGGCTCTGGAGTTTGAAGTTCGCAACAAAAAAGCGGAAGAAC AAGAAAATGCCACACTTCACCCACGATTGAATGAGTGTAAAGAACTGATTACCCGCCTCTATAGTGGCAACAAGAAAAGT GGCGATGGCAATGAGATCAAACTGTTAGCCAAAGAGCTTGAACGCAAACTTGGCAAGCGCGATGAATGGGACTTCACAAC CCTACGCCACTTGTTTGATGCCTTTGCACAAGGTCGAAAACGTCGTCGCCGCTCTGAACAACACGAAAAGAACTGGCTTC GTTTGGCGGGCTTTTCTCTTCGCCCGGGCTTTGGCGACGCAACCGATTCTTGGCGTATCGAACAAGTTTGGGGGCTCTAC CAACAAGGTATCCAGTTCCAGAATCATCAAGGTTGGACCGATTGGTGGGTATTCTGGCGTCGTATAGCTGGAGGCTTGAA CCAAGAGCAACAAGAAACACTGCTTGCCGACATTGCCAAGTATTTACACCCTGGCGCGATGAAAAACCCACAAACGGCAA AAGCCGCGCAAGATATGGGCTACGAAGCCATGGTTCGACTTGCCGCGTCTCTAGAACATCTGGAAGTGGAAGACAAAGTT TTGCTAACCAGTTGGTTTTTAAGCAAAGCTCTGAATCAAAACCAATTTGAGCAAGCGCACTGGTGGGCGATTGGCCGATT GGCCTCTCGTACACCGCTCTACGCAAGCCAACATCGTGTTATTCCACGTGAGCAAGCGGAACAATGGTTACCGAAACTAT TGGATCAGAACTGGCAGAAAGAACCGATGATCGCCTTTGCTGCGGTGATGATTTGTCGTAAAACGGGTGATCGTCTCTTT GATATCTCTGAAGATTTCCGCCAACAAGTGCTCACCAAACTGAAACAGAGCCGAGTGCCGGAAGCGTGGGTAAGCTTGGT CGAAGAGATCAAAGAGCTTTCTGAAAGCGAGTCTAAACGCGTGTTTGGTGATGCTCTCCCGAGCGGGTTGCGTCTGGTGA CTCAGTAA
Upstream 100 bases:
>100_bases GTGGAATTTGACGTGCGTGACGATGCCTCTTTGGCAGAATAATCGAACAAAGCAAACGGCATCCGAAGGGTGCCGTTTTT AAATCAATCAAGGGTTTGTC
Downstream 100 bases:
>100_bases ACCGTCGTTCGCAAACCTCCTAATCAGCCAGCCTCATGCTGGCTGATTGTTTTTCATCGTGCACCAACCAATTAGCATCG ACCCTTTTTCGCCTGTCCAG
Product: DnaK-related protein
Products: NA
Alternate protein names: HSP70; Heat shock 70 kDa protein; Heat shock protein 70 [H]
Number of amino acids: Translated: 935; Mature: 934
Protein sequence:
>935_residues MASPRYLVGIDLGTTNTVVAFCELTENLQQSNVSLFDIDQLIGPGEVVRKPLLPSFRYHPANGQIAPADLTLPWENQTVA GDIANVIIGEWARELGAKVEGRQVSSAKSWLSHQAVDRHSDILPWAGVSDVEKVSPVIASASYLNHIRQAWNHRHPGNLL EDQEVVVTVPASFDETARKLTLEAAQLAGLSQVLLLEEPQAVCYDWYARHQHSAAELLKEIPLILVCDVGGGTTDLSLIE AKFNQDALALDRIGVGEHLMLGGDNLDLALAHLAEQRFNQSKKLNAASLTKLIQQTRKAKEQLLSSTAPEEVKITMLGSG SKLLGGTKSIALNKQEVYQIALDGFFPLSDFAQTPDKRRSAVVEFGLPYVADPAVSKHVAEFLSQHQQVSHAALGQSESD QPAIPVGLLLNGGVFNSDLVTARMTELLGRWRGAPVTVLDNPHPDWSVALGAVAFAKARRGAQLKIGGGSARSYFLHLQE KNKMGKALCLLAKGTEEGQEIRLTGRRFSLTLGEPVRFNLLTSTHDALSHHVAIQNGVMADIDPDIFTPLPPYIVTLQGE GAELEANQKERVEVQLACQLTEVGTLKMECVSVEEEDKRWALEFEVRNKKAEEQENATLHPRLNECKELITRLYSGNKKS GDGNEIKLLAKELERKLGKRDEWDFTTLRHLFDAFAQGRKRRRRSEQHEKNWLRLAGFSLRPGFGDATDSWRIEQVWGLY QQGIQFQNHQGWTDWWVFWRRIAGGLNQEQQETLLADIAKYLHPGAMKNPQTAKAAQDMGYEAMVRLAASLEHLEVEDKV LLTSWFLSKALNQNQFEQAHWWAIGRLASRTPLYASQHRVIPREQAEQWLPKLLDQNWQKEPMIAFAAVMICRKTGDRLF DISEDFRQQVLTKLKQSRVPEAWVSLVEEIKELSESESKRVFGDALPSGLRLVTQ
Sequences:
>Translated_935_residues MASPRYLVGIDLGTTNTVVAFCELTENLQQSNVSLFDIDQLIGPGEVVRKPLLPSFRYHPANGQIAPADLTLPWENQTVA GDIANVIIGEWARELGAKVEGRQVSSAKSWLSHQAVDRHSDILPWAGVSDVEKVSPVIASASYLNHIRQAWNHRHPGNLL EDQEVVVTVPASFDETARKLTLEAAQLAGLSQVLLLEEPQAVCYDWYARHQHSAAELLKEIPLILVCDVGGGTTDLSLIE AKFNQDALALDRIGVGEHLMLGGDNLDLALAHLAEQRFNQSKKLNAASLTKLIQQTRKAKEQLLSSTAPEEVKITMLGSG SKLLGGTKSIALNKQEVYQIALDGFFPLSDFAQTPDKRRSAVVEFGLPYVADPAVSKHVAEFLSQHQQVSHAALGQSESD QPAIPVGLLLNGGVFNSDLVTARMTELLGRWRGAPVTVLDNPHPDWSVALGAVAFAKARRGAQLKIGGGSARSYFLHLQE KNKMGKALCLLAKGTEEGQEIRLTGRRFSLTLGEPVRFNLLTSTHDALSHHVAIQNGVMADIDPDIFTPLPPYIVTLQGE GAELEANQKERVEVQLACQLTEVGTLKMECVSVEEEDKRWALEFEVRNKKAEEQENATLHPRLNECKELITRLYSGNKKS GDGNEIKLLAKELERKLGKRDEWDFTTLRHLFDAFAQGRKRRRRSEQHEKNWLRLAGFSLRPGFGDATDSWRIEQVWGLY QQGIQFQNHQGWTDWWVFWRRIAGGLNQEQQETLLADIAKYLHPGAMKNPQTAKAAQDMGYEAMVRLAASLEHLEVEDKV LLTSWFLSKALNQNQFEQAHWWAIGRLASRTPLYASQHRVIPREQAEQWLPKLLDQNWQKEPMIAFAAVMICRKTGDRLF DISEDFRQQVLTKLKQSRVPEAWVSLVEEIKELSESESKRVFGDALPSGLRLVTQ >Mature_934_residues ASPRYLVGIDLGTTNTVVAFCELTENLQQSNVSLFDIDQLIGPGEVVRKPLLPSFRYHPANGQIAPADLTLPWENQTVAG DIANVIIGEWARELGAKVEGRQVSSAKSWLSHQAVDRHSDILPWAGVSDVEKVSPVIASASYLNHIRQAWNHRHPGNLLE DQEVVVTVPASFDETARKLTLEAAQLAGLSQVLLLEEPQAVCYDWYARHQHSAAELLKEIPLILVCDVGGGTTDLSLIEA KFNQDALALDRIGVGEHLMLGGDNLDLALAHLAEQRFNQSKKLNAASLTKLIQQTRKAKEQLLSSTAPEEVKITMLGSGS KLLGGTKSIALNKQEVYQIALDGFFPLSDFAQTPDKRRSAVVEFGLPYVADPAVSKHVAEFLSQHQQVSHAALGQSESDQ PAIPVGLLLNGGVFNSDLVTARMTELLGRWRGAPVTVLDNPHPDWSVALGAVAFAKARRGAQLKIGGGSARSYFLHLQEK NKMGKALCLLAKGTEEGQEIRLTGRRFSLTLGEPVRFNLLTSTHDALSHHVAIQNGVMADIDPDIFTPLPPYIVTLQGEG AELEANQKERVEVQLACQLTEVGTLKMECVSVEEEDKRWALEFEVRNKKAEEQENATLHPRLNECKELITRLYSGNKKSG DGNEIKLLAKELERKLGKRDEWDFTTLRHLFDAFAQGRKRRRRSEQHEKNWLRLAGFSLRPGFGDATDSWRIEQVWGLYQ QGIQFQNHQGWTDWWVFWRRIAGGLNQEQQETLLADIAKYLHPGAMKNPQTAKAAQDMGYEAMVRLAASLEHLEVEDKVL LTSWFLSKALNQNQFEQAHWWAIGRLASRTPLYASQHRVIPREQAEQWLPKLLDQNWQKEPMIAFAAVMICRKTGDRLFD ISEDFRQQVLTKLKQSRVPEAWVSLVEEIKELSESESKRVFGDALPSGLRLVTQ
Specific function: Acts as a chaperone [H]
COG id: COG0443
COG function: function code O; Molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heat shock protein 70 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320950, Length=336, Percent_Identity=24.4047619047619, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012725 - InterPro: IPR018181 - InterPro: IPR001023 - InterPro: IPR013126 [H]
Pfam domain/function: PF00012 HSP70 [H]
EC number: NA
Molecular weight: Translated: 104464; Mature: 104333
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASPRYLVGIDLGTTNTVVAFCELTENLQQSNVSLFDIDQLIGPGEVVRKPLLPSFRYHP CCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEHHHHCCCHHHHHCCCCCCCEECC ANGQIAPADLTLPWENQTVAGDIANVIIGEWARELGAKVEGRQVSSAKSWLSHQAVDRHS CCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC DILPWAGVSDVEKVSPVIASASYLNHIRQAWNHRHPGNLLEDQEVVVTVPASFDETARKL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHH TLEAAQLAGLSQVLLLEEPQAVCYDWYARHQHSAAELLKEIPLILVCDVGGGTTDLSLIE HHHHHHHCCCHHEEEECCCHHHHHHHHHHHCHHHHHHHHHCCEEEEEECCCCCCCHHHHH AKFNQDALALDRIGVGEHLMLGGDNLDLALAHLAEQRFNQSKKLNAASLTKLIQQTRKAK HHCCCCCHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHH EQLLSSTAPEEVKITMLGSGSKLLGGTKSIALNKQEVYQIALDGFFPLSDFAQTPDKRRS HHHHHCCCCCCEEEEEECCCCHHCCCCHHEEECHHHHHHHHHCCCCCHHHHHCCCCHHHH AVVEFGLPYVADPAVSKHVAEFLSQHQQVSHAALGQSESDQPAIPVGLLLNGGVFNSDLV HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHH TARMTELLGRWRGAPVTVLDNPHPDWSVALGAVAFAKARRGAQLKIGGGSARSYFLHLQE HHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEHH KNKMGKALCLLAKGTEEGQEIRLTGRRFSLTLGEPVRFNLLTSTHDALSHHVAIQNGVMA HCCCCCEEEEEECCCCCCCEEEEECCEEEEEECCCEEEEEEHHHHHHHHHHHHHCCCEEE DIDPDIFTPLPPYIVTLQGEGAELEANQKERVEVQLACQLTEVGTLKMECVSVEEEDKRW CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEEHHCCCEEEEEECCCCCCCEE ALEFEVRNKKAEEQENATLHPRLNECKELITRLYSGNKKSGDGNEIKLLAKELERKLGKR EEEEEECCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCC DEWDFTTLRHLFDAFAQGRKRRRRSEQHEKNWLRLAGFSLRPGFGDATDSWRIEQVWGLY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHH QQGIQFQNHQGWTDWWVFWRRIAGGLNQEQQETLLADIAKYLHPGAMKNPQTAKAAQDMG HHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCC YEAMVRLAASLEHLEVEDKVLLTSWFLSKALNQNQFEQAHWWAIGRLASRTPLYASQHRV HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCC IPREQAEQWLPKLLDQNWQKEPMIAFAAVMICRKTGDRLFDISEDFRQQVLTKLKQSRVP CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHCCCC EAWVSLVEEIKELSESESKRVFGDALPSGLRLVTQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCC >Mature Secondary Structure ASPRYLVGIDLGTTNTVVAFCELTENLQQSNVSLFDIDQLIGPGEVVRKPLLPSFRYHP CCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEHHHHCCCHHHHHCCCCCCCEECC ANGQIAPADLTLPWENQTVAGDIANVIIGEWARELGAKVEGRQVSSAKSWLSHQAVDRHS CCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC DILPWAGVSDVEKVSPVIASASYLNHIRQAWNHRHPGNLLEDQEVVVTVPASFDETARKL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHH TLEAAQLAGLSQVLLLEEPQAVCYDWYARHQHSAAELLKEIPLILVCDVGGGTTDLSLIE HHHHHHHCCCHHEEEECCCHHHHHHHHHHHCHHHHHHHHHCCEEEEEECCCCCCCHHHHH AKFNQDALALDRIGVGEHLMLGGDNLDLALAHLAEQRFNQSKKLNAASLTKLIQQTRKAK HHCCCCCHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHH EQLLSSTAPEEVKITMLGSGSKLLGGTKSIALNKQEVYQIALDGFFPLSDFAQTPDKRRS HHHHHCCCCCCEEEEEECCCCHHCCCCHHEEECHHHHHHHHHCCCCCHHHHHCCCCHHHH AVVEFGLPYVADPAVSKHVAEFLSQHQQVSHAALGQSESDQPAIPVGLLLNGGVFNSDLV HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHH TARMTELLGRWRGAPVTVLDNPHPDWSVALGAVAFAKARRGAQLKIGGGSARSYFLHLQE HHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEHH KNKMGKALCLLAKGTEEGQEIRLTGRRFSLTLGEPVRFNLLTSTHDALSHHVAIQNGVMA HCCCCCEEEEEECCCCCCCEEEEECCEEEEEECCCEEEEEEHHHHHHHHHHHHHCCCEEE DIDPDIFTPLPPYIVTLQGEGAELEANQKERVEVQLACQLTEVGTLKMECVSVEEEDKRW CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEEHHCCCEEEEEECCCCCCCEE ALEFEVRNKKAEEQENATLHPRLNECKELITRLYSGNKKSGDGNEIKLLAKELERKLGKR EEEEEECCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCC DEWDFTTLRHLFDAFAQGRKRRRRSEQHEKNWLRLAGFSLRPGFGDATDSWRIEQVWGLY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHH QQGIQFQNHQGWTDWWVFWRRIAGGLNQEQQETLLADIAKYLHPGAMKNPQTAKAAQDMG HHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCC YEAMVRLAASLEHLEVEDKVLLTSWFLSKALNQNQFEQAHWWAIGRLASRTPLYASQHRV HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCC IPREQAEQWLPKLLDQNWQKEPMIAFAAVMICRKTGDRLFDISEDFRQQVLTKLKQSRVP CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHCCCC EAWVSLVEEIKELSESESKRVFGDALPSGLRLVTQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12835416 [H]