Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is 37680185
Identifier: 37680185
GI number: 37680185
Start: 2001599
End: 2002126
Strand: Direct
Name: 37680185
Synonym: VV2000
Alternate gene names: NA
Gene position: 2001599-2002126 (Clockwise)
Preceding gene: 229047212
Following gene: 37680189
Centisome position: 59.67
GC content: 50.95
Gene sequence:
>528_bases TTGCTGGAGATAGGCGGGCATCCATCCGCGCAGTTCATTGCCATCTTGGATATCCTGCATCGAGATCGCTCGAACCAAGG TATGGCTGATATCTTGCACTTTATCGTTACTGCGAATCAGCGAGGTGAGATCGACAAACGCCAGCGCCATTACCAGCAAC AAAGGGATAAACATCAATGCTTCTACCGCCACACTGCCAGTTTGAACACGGCGGCGAGAGAGTCTATTCAGTTTCAAACG CTTTCTCCGGAATTAAAGCCACTTGGTTTCGGTAGGTGTACGTCATCTCGCGTTCACTCAACAGAGGAATCGCTAACGCG GGTAATGAGAGTGTTACCGTCAATACGATCACTCCTTGTTGCAATCGCACCTGTGTCGTTTCCTCGGTTGCGGCCACGCC GAGCCATTGTGCAATCGAAGGGTGCCATTGAGGCTCTATGGTGGCTTCACTGGTTAACTCCGGACTGTGTAACAGCAACT GTTGCGAAAAATGTTCAAGGAGCGCGTTCGGATCAGCCTCTTGCTTGA
Upstream 100 bases:
>100_bases GTTGGCACGCCCCTTCTGCCAGCACAAAGCTGTTTTGCTCAGAGAAAAACTGGACTTTGACTCCGAGCACTGAGCCGGGC TTGGCCATTAGCTGTTCCGC
Downstream 100 bases:
>100_bases GCTGGGTTGCCCGCCTCGCTTGCTGAACCGCATGATCAAGGGATGAAAAATGCCACTGCACGCGGCCAATTTCGAAAAAG AGCAAAACCAGCGCTAACAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MLEIGGHPSAQFIAILDILHRDRSNQGMADILHFIVTANQRGEIDKRQRHYQQQRDKHQCFYRHTASLNTAARESIQFQT LSPELKPLGFGRCTSSRVHSTEESLTRVMRVLPSIRSLLVAIAPVSFPRLRPRRAIVQSKGAIEALWWLHWLTPDCVTAT VAKNVQGARSDQPLA
Sequences:
>Translated_175_residues MLEIGGHPSAQFIAILDILHRDRSNQGMADILHFIVTANQRGEIDKRQRHYQQQRDKHQCFYRHTASLNTAARESIQFQT LSPELKPLGFGRCTSSRVHSTEESLTRVMRVLPSIRSLLVAIAPVSFPRLRPRRAIVQSKGAIEALWWLHWLTPDCVTAT VAKNVQGARSDQPLA >Mature_175_residues MLEIGGHPSAQFIAILDILHRDRSNQGMADILHFIVTANQRGEIDKRQRHYQQQRDKHQCFYRHTASLNTAARESIQFQT LSPELKPLGFGRCTSSRVHSTEESLTRVMRVLPSIRSLLVAIAPVSFPRLRPRRAIVQSKGAIEALWWLHWLTPDCVTAT VAKNVQGARSDQPLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19841; Mature: 19841
Theoretical pI: Translated: 10.92; Mature: 10.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEIGGHPSAQFIAILDILHRDRSNQGMADILHFIVTANQRGEIDKRQRHYQQQRDKHQC CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH FYRHTASLNTAARESIQFQTLSPELKPLGFGRCTSSRVHSTEESLTRVMRVLPSIRSLLV HHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AIAPVSFPRLRPRRAIVQSKGAIEALWWLHWLTPDCVTATVAKNVQGARSDQPLA HHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MLEIGGHPSAQFIAILDILHRDRSNQGMADILHFIVTANQRGEIDKRQRHYQQQRDKHQC CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH FYRHTASLNTAARESIQFQTLSPELKPLGFGRCTSSRVHSTEESLTRVMRVLPSIRSLLV HHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AIAPVSFPRLRPRRAIVQSKGAIEALWWLHWLTPDCVTATVAKNVQGARSDQPLA HHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA