Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is 37680161
Identifier: 37680161
GI number: 37680161
Start: 1972120
End: 1972953
Strand: Direct
Name: 37680161
Synonym: VV1977
Alternate gene names: NA
Gene position: 1972120-1972953 (Clockwise)
Preceding gene: 37680153
Following gene: 37680162
Centisome position: 58.79
GC content: 46.4
Gene sequence:
>834_bases GTGAAACAGTGTCATATTGCACTGTGTGCGCTAACTGCATCTTGCTTGCCGTTTACAGTTCATGCAGAAGATGTCGCCGA ATCTATGGTGGCCCCACCGACTCAAAACAGTCCGTGGAATTTGACGTTTTCGACTTCATACAGCCGAAACGCCTACCCCG ACAACAGCTATCTTGCATCACGTTCTCTCGACGCCAGTCTCACCGTGAAATATGAAACGGAAACCAACTGGCTCTTTAGT GCCAATTTCAGTGGCGTTCATCAATTCGACGGGCATGAGGGACAGTATTGGCGAGATGTATGGTTACGAGCGGTTTACCG AGATCTCTACCAACCAACAGAAAATCTCAATTTTTCTGCGAGTATTCGTGGGTTAATTCCTATCTCTGACATCGCAAAAA CCACCGACCTTTCTACTGCTTTTCGTGCGGATCTCAATCTCAGCTATGACCTTGGCTTTTTGCTTGAAGGGCTACAACTA ACCGATTCCGTTCGTCTAAGAAAAAATTTCCATCGTTACACCACGGCAGGCAATCTCCAGCTCGAAGAGTATCGCCTGAG TAACAGTTTTGGTTTGAGCTACGAATATGGTGACTGGTGGATCTCCACCACCATTGACAGTTCAAAATCGTGGACCTACC GAGGTTCAGAATATTCTCCTGAATTCTCACACGCCGAAGAGATTGGTTACAACGTAACCGAAAGCTTTTCTGTCGCTGCT GGTTTAACCAACAGCGCCCGGTATTTCGATACCGACCGAGGACCAAACCCAATCGACACCTTATTCGACTTGGACAAGCC AACTTACTACTTAACACTCACATATAACTATTAA
Upstream 100 bases:
>100_bases TGATACTTTCCATGAATAGATGTTCTTCTTCCAATGATTCCTCTAGTATCCGTCAATCATAAAAAACACTACATTAATCA CAAATTACAAGGAAAGTAGA
Downstream 100 bases:
>100_bases ACTGGTGCACAACATGTATAGAAAGTTATTACTCGCCACTATGGTGTCTGTGGCATTGTATGGCTGTGGCGCAGAGGAAC GCGCATATGAATATCAACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MKQCHIALCALTASCLPFTVHAEDVAESMVAPPTQNSPWNLTFSTSYSRNAYPDNSYLASRSLDASLTVKYETETNWLFS ANFSGVHQFDGHEGQYWRDVWLRAVYRDLYQPTENLNFSASIRGLIPISDIAKTTDLSTAFRADLNLSYDLGFLLEGLQL TDSVRLRKNFHRYTTAGNLQLEEYRLSNSFGLSYEYGDWWISTTIDSSKSWTYRGSEYSPEFSHAEEIGYNVTESFSVAA GLTNSARYFDTDRGPNPIDTLFDLDKPTYYLTLTYNY
Sequences:
>Translated_277_residues MKQCHIALCALTASCLPFTVHAEDVAESMVAPPTQNSPWNLTFSTSYSRNAYPDNSYLASRSLDASLTVKYETETNWLFS ANFSGVHQFDGHEGQYWRDVWLRAVYRDLYQPTENLNFSASIRGLIPISDIAKTTDLSTAFRADLNLSYDLGFLLEGLQL TDSVRLRKNFHRYTTAGNLQLEEYRLSNSFGLSYEYGDWWISTTIDSSKSWTYRGSEYSPEFSHAEEIGYNVTESFSVAA GLTNSARYFDTDRGPNPIDTLFDLDKPTYYLTLTYNY >Mature_277_residues MKQCHIALCALTASCLPFTVHAEDVAESMVAPPTQNSPWNLTFSTSYSRNAYPDNSYLASRSLDASLTVKYETETNWLFS ANFSGVHQFDGHEGQYWRDVWLRAVYRDLYQPTENLNFSASIRGLIPISDIAKTTDLSTAFRADLNLSYDLGFLLEGLQL TDSVRLRKNFHRYTTAGNLQLEEYRLSNSFGLSYEYGDWWISTTIDSSKSWTYRGSEYSPEFSHAEEIGYNVTESFSVAA GLTNSARYFDTDRGPNPIDTLFDLDKPTYYLTLTYNY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31590; Mature: 31590
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00496 PII_GLNB_UMP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQCHIALCALTASCLPFTVHAEDVAESMVAPPTQNSPWNLTFSTSYSRNAYPDNSYLAS CCCHHEEHEEHHHHHCEEEEEHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCEEEC RSLDASLTVKYETETNWLFSANFSGVHQFDGHEGQYWRDVWLRAVYRDLYQPTENLNFSA CCCCCEEEEEEECCCCEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEE SIRGLIPISDIAKTTDLSTAFRADLNLSYDLGFLLEGLQLTDSVRLRKNFHRYTTAGNLQ EEEEEEEHHHHHHHCCCCHHEEECCCCEECHHHHHCCHHHHHHHHHHHHHHHEECCCCEE LEEYRLSNSFGLSYEYGDWWISTTIDSSKSWTYRGSEYSPEFSHAEEIGYNVTESFSVAA EEEEEECCCCCCEEECCCEEEEEEECCCCCEEECCCCCCCCCCCHHHCCCCCCCCEEEEE GLTNSARYFDTDRGPNPIDTLFDLDKPTYYLTLTYNY CCCCCCEEEECCCCCCHHHHHEECCCCEEEEEEEECC >Mature Secondary Structure MKQCHIALCALTASCLPFTVHAEDVAESMVAPPTQNSPWNLTFSTSYSRNAYPDNSYLAS CCCHHEEHEEHHHHHCEEEEEHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCEEEC RSLDASLTVKYETETNWLFSANFSGVHQFDGHEGQYWRDVWLRAVYRDLYQPTENLNFSA CCCCCEEEEEEECCCCEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEE SIRGLIPISDIAKTTDLSTAFRADLNLSYDLGFLLEGLQLTDSVRLRKNFHRYTTAGNLQ EEEEEEEHHHHHHHCCCCHHEEECCCCEECHHHHHCCHHHHHHHHHHHHHHHEECCCCEE LEEYRLSNSFGLSYEYGDWWISTTIDSSKSWTYRGSEYSPEFSHAEEIGYNVTESFSVAA EEEEEECCCCCCEEECCCEEEEEEECCCCCEEECCCCCCCCCCCHHHCCCCCCCCEEEEE GLTNSARYFDTDRGPNPIDTLFDLDKPTYYLTLTYNY CCCCCCEEEECCCCCCHHHHHEECCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA