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The map label for this gene is oppC [H]

Identifier: 37523693

GI number: 37523693

Start: 4320083

End: 4321003

Strand: Reverse

Name: oppC [H]

Synonym: gll4124

Alternate gene names: 37523693

Gene position: 4321003-4320083 (Counterclockwise)

Preceding gene: 37523694

Following gene: 37523692

Centisome position: 92.74

GC content: 61.24

Gene sequence:

>921_bases
ATGCAAACCCCGGTAGAACCCACCGCAGCTACGCTCGCCCCTGAGTCCTTCGAACTGGTCCGGGGCACCAGCCTCTGGCA
GGACGCCCGGCGGCGGCTTGTCAAGAACAAACTGGCAGTGGCGAGTGCCGTCGTCTTTGCGATCATCCTGGCAGCCGTCC
TGGTCGGTCCGGCGATCATCTCGATGACCTGGGGCTACACCTACGACCAGACCAATCCCGAAACCGTCTACCAGGCGCCC
AGCCCGGCCCACTGGTTCGGCACCGACCAACTCGGCCGCGACATCCTGGTGCGCTCGCTCATCGGCGGTCAGATTTCGCT
GTTGGTGGCGGTGGTGGCCTCGGTAGTCAGTTTATTGATTGGCGTCACCTACGGCGCCATCTCGGGCTACCTCGGCGGCA
AGGTGGACGAGGCGATGATGCGCTTTGTCGATATTCTCTATTCGCTGCCGGACATTTTTCTCATCATCGTGCTGCTCGCG
TTTTTCAGCAAAGACCTGATCGTCCTCTTTGCGATGCTGGGAGCGATTTCCTGGCTCACCATGGCCCGGATCGTGCGCGG
CCAGGTGCTCTCCATCAAAAACCGCGAATTTGTCGAAGCGGCCCGCGCCATCGGGGTGAGCACCCCCAAAATCATCTTCC
GGCACATCGTGCCCAACACCCTAGGGCCGGTGATCGTTTATACGACATTGACCATTCCGAGCGTCATGCTCACCGAGGCG
TTCTTGAGCTTTCTGGGCCTTGGGGTGCAGCCGCCTCTTTCCAGTTGGGGGACGCTGGTGCAGGAGGGGGTGGGGGCGAT
TTCGGTCTATCCGTGGCACCTGATCTTTCCGGGGTTGATGATGACGGTGACGCTCTTTAGCCTCAACTTTTTGGGCGACG
GCCTGCGCGATGCCCTCGATCCCCAATCGCGGGCCGACTGA

Upstream 100 bases:

>100_bases
GAGTGACGCTGGTGGTCGCCACCTTGCTCATCGTCCTCAACCTGGTGGTCGATATCGTCTACGCCCTCATCGATCCACGC
ATCGCCTATAAATAATCCCC

Downstream 100 bases:

>100_bases
TGGCTGGACCGCTGCTTTCTGTGCGCAACCTGCAGACCTCGTTTTTTACCCGCGAGGGCGAGGTGAGGTCAGTCGACGAT
GTGTCTTTTGATCTCGAAGC

Product: oligopeptide ABC transporter permease protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MQTPVEPTAATLAPESFELVRGTSLWQDARRRLVKNKLAVASAVVFAIILAAVLVGPAIISMTWGYTYDQTNPETVYQAP
SPAHWFGTDQLGRDILVRSLIGGQISLLVAVVASVVSLLIGVTYGAISGYLGGKVDEAMMRFVDILYSLPDIFLIIVLLA
FFSKDLIVLFAMLGAISWLTMARIVRGQVLSIKNREFVEAARAIGVSTPKIIFRHIVPNTLGPVIVYTTLTIPSVMLTEA
FLSFLGLGVQPPLSSWGTLVQEGVGAISVYPWHLIFPGLMMTVTLFSLNFLGDGLRDALDPQSRAD

Sequences:

>Translated_306_residues
MQTPVEPTAATLAPESFELVRGTSLWQDARRRLVKNKLAVASAVVFAIILAAVLVGPAIISMTWGYTYDQTNPETVYQAP
SPAHWFGTDQLGRDILVRSLIGGQISLLVAVVASVVSLLIGVTYGAISGYLGGKVDEAMMRFVDILYSLPDIFLIIVLLA
FFSKDLIVLFAMLGAISWLTMARIVRGQVLSIKNREFVEAARAIGVSTPKIIFRHIVPNTLGPVIVYTTLTIPSVMLTEA
FLSFLGLGVQPPLSSWGTLVQEGVGAISVYPWHLIFPGLMMTVTLFSLNFLGDGLRDALDPQSRAD
>Mature_306_residues
MQTPVEPTAATLAPESFELVRGTSLWQDARRRLVKNKLAVASAVVFAIILAAVLVGPAIISMTWGYTYDQTNPETVYQAP
SPAHWFGTDQLGRDILVRSLIGGQISLLVAVVASVVSLLIGVTYGAISGYLGGKVDEAMMRFVDILYSLPDIFLIIVLLA
FFSKDLIVLFAMLGAISWLTMARIVRGQVLSIKNREFVEAARAIGVSTPKIIFRHIVPNTLGPVIVYTTLTIPSVMLTEA
FLSFLGLGVQPPLSSWGTLVQEGVGAISVYPWHLIFPGLMMTVTLFSLNFLGDGLRDALDPQSRAD

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787498, Length=302, Percent_Identity=51.9867549668874, Blast_Score=284, Evalue=5e-78,
Organism=Escherichia coli, GI1787054, Length=282, Percent_Identity=37.2340425531915, Blast_Score=191, Evalue=6e-50,
Organism=Escherichia coli, GI1787760, Length=273, Percent_Identity=35.5311355311355, Blast_Score=170, Evalue=1e-43,
Organism=Escherichia coli, GI1789964, Length=232, Percent_Identity=39.6551724137931, Blast_Score=139, Evalue=3e-34,
Organism=Escherichia coli, GI1789889, Length=224, Percent_Identity=33.4821428571429, Blast_Score=139, Evalue=3e-34,
Organism=Escherichia coli, GI1788505, Length=224, Percent_Identity=34.8214285714286, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI1787549, Length=220, Percent_Identity=30.9090909090909, Blast_Score=100, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33167; Mature: 33167

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTPVEPTAATLAPESFELVRGTSLWQDARRRLVKNKLAVASAVVFAIILAAVLVGPAII
CCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SMTWGYTYDQTNPETVYQAPSPAHWFGTDQLGRDILVRSLIGGQISLLVAVVASVVSLLI
HHHCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVTYGAISGYLGGKVDEAMMRFVDILYSLPDIFLIIVLLAFFSKDLIVLFAMLGAISWLT
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MARIVRGQVLSIKNREFVEAARAIGVSTPKIIFRHIVPNTLGPVIVYTTLTIPSVMLTEA
HHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
FLSFLGLGVQPPLSSWGTLVQEGVGAISVYPWHLIFPGLMMTVTLFSLNFLGDGLRDALD
HHHHHCCCCCCCHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCHHHHHCC
PQSRAD
CCCCCC
>Mature Secondary Structure
MQTPVEPTAATLAPESFELVRGTSLWQDARRRLVKNKLAVASAVVFAIILAAVLVGPAII
CCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SMTWGYTYDQTNPETVYQAPSPAHWFGTDQLGRDILVRSLIGGQISLLVAVVASVVSLLI
HHHCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVTYGAISGYLGGKVDEAMMRFVDILYSLPDIFLIIVLLAFFSKDLIVLFAMLGAISWLT
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MARIVRGQVLSIKNREFVEAARAIGVSTPKIIFRHIVPNTLGPVIVYTTLTIPSVMLTEA
HHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
FLSFLGLGVQPPLSSWGTLVQEGVGAISVYPWHLIFPGLMMTVTLFSLNFLGDGLRDALD
HHHHHCCCCCCCHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCHHHHHCC
PQSRAD
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]