Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
---|---|
Accession | NC_005125 |
Length | 4,659,019 |
Click here to switch to the map view.
The map label for this gene is 37522538
Identifier: 37522538
GI number: 37522538
Start: 3169023
End: 3170183
Strand: Direct
Name: 37522538
Synonym: glr2969
Alternate gene names: NA
Gene position: 3169023-3170183 (Clockwise)
Preceding gene: 37522537
Following gene: 37522539
Centisome position: 68.02
GC content: 49.7
Gene sequence:
>1161_bases ATGGAAGCGCTCAGAAAAATGGGTTTCAGTGTTTCCGAGGTTGGACGGCAACTGCTCATTGTGTTCGTTCGGTTTTCGAT GTCCATCATTTTTTTAGGTATCATACTCGGTGCCTATGGGTGGTGCTTTTACTGGATTCAAGAATGGTTTAACGTCATTT ACCTGCGCAGCCTGGGACTATTTTTCTTGCAGCTTGATACAAAAATTGTCACCGTTGCAATGGCGGCCTTCCAGGGTTCC TACACGTTTCCTGCCGGTCTGACGGTGCCGCTGGCTCCGATAGTTGTGGCCGTCGGGCTGGTCGGTATCGTCGGTCCGTT CAAACAGCCTCATAAATTATTTTTGCAACTGTATGCGGTCAACTTGGGAGGGGCGGCTTTTCTGGCAGTTGCGGCAATAG TGATTCGTCTATTTCAGCCAACGCCTTTACCCCAAGCATGGGTGGCTTATGGCTATCTGGCTCTGGTGGCCGTGGTACTG TTTGGCTGCCTGATTATCTTGCCTGTCGAGCTTTTTCGCAAAACCTACAGATGGCAAGGCGACGGAATTACAGCCTTCTG GGGAGGTCTTGGCTCATTTTTCAATTTTACGGATACAAAGAAAACAGCTACTAACACGCAACTGGAACATCGGATTGGCA GCCCTGATCCGTATGACATAAAAATCGGCAAATTACTTTTGCATCAACTGCAAGTCGATGGCATTTTGTTGACTGGTGTG GCAATCCCCTACAAAAAAGACAGCATTCGGTACGACAATATCTTGCTCTGTGATCGTGGAATTTTTGTGATCGAAGGCAA GAACTACACAGGCACGATCCGAGGCGATACCAATAGCTCCTGGCAAACACACACCGGCAGCCCGATTAAATCTAGCCGCG GCGAAAACCCATTGCAGCAATGTGATAAGCAGGTCATGGCACTCAAAAATTTCTTCGCGGAGTATGCAGTATTCGTAAAC GGTGCTGTAGTCTTCCCTAGCCGTGCCAGCTTTGCCCTGGACCATGTCCAGATCAACACTTTTCCCTACAGCACCGCCGT ACCGGTTTTCAATGAAAGTGCGCTCGTCGATGCCATCAACAAGCACCGCCCACCCATTGGGAAGTCCGTGCCGCCGCAGA CGGTGTTGCGGCAGATGGCCGATCGCATTATGAAAGTTTGA
Upstream 100 bases:
>100_bases TTGCCTAATCCCTGCAAACCGCAATCAGGCACGTCCCGCCCGACGCAGTACTGACGAAGCCAGCAACCGACATCACAATC ACTCCCCTGGAGGAATCACG
Downstream 100 bases:
>100_bases GTGATTGCGCCAAACTGAACAATCCAAGCAGCGTCTCAACAGTAGGACTTGCGACAGAACTGCCGGTATCCTATAACGCA GGTGTCTTCCCCCCAGGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MEALRKMGFSVSEVGRQLLIVFVRFSMSIIFLGIILGAYGWCFYWIQEWFNVIYLRSLGLFFLQLDTKIVTVAMAAFQGS YTFPAGLTVPLAPIVVAVGLVGIVGPFKQPHKLFLQLYAVNLGGAAFLAVAAIVIRLFQPTPLPQAWVAYGYLALVAVVL FGCLIILPVELFRKTYRWQGDGITAFWGGLGSFFNFTDTKKTATNTQLEHRIGSPDPYDIKIGKLLLHQLQVDGILLTGV AIPYKKDSIRYDNILLCDRGIFVIEGKNYTGTIRGDTNSSWQTHTGSPIKSSRGENPLQQCDKQVMALKNFFAEYAVFVN GAVVFPSRASFALDHVQINTFPYSTAVPVFNESALVDAINKHRPPIGKSVPPQTVLRQMADRIMKV
Sequences:
>Translated_386_residues MEALRKMGFSVSEVGRQLLIVFVRFSMSIIFLGIILGAYGWCFYWIQEWFNVIYLRSLGLFFLQLDTKIVTVAMAAFQGS YTFPAGLTVPLAPIVVAVGLVGIVGPFKQPHKLFLQLYAVNLGGAAFLAVAAIVIRLFQPTPLPQAWVAYGYLALVAVVL FGCLIILPVELFRKTYRWQGDGITAFWGGLGSFFNFTDTKKTATNTQLEHRIGSPDPYDIKIGKLLLHQLQVDGILLTGV AIPYKKDSIRYDNILLCDRGIFVIEGKNYTGTIRGDTNSSWQTHTGSPIKSSRGENPLQQCDKQVMALKNFFAEYAVFVN GAVVFPSRASFALDHVQINTFPYSTAVPVFNESALVDAINKHRPPIGKSVPPQTVLRQMADRIMKV >Mature_386_residues MEALRKMGFSVSEVGRQLLIVFVRFSMSIIFLGIILGAYGWCFYWIQEWFNVIYLRSLGLFFLQLDTKIVTVAMAAFQGS YTFPAGLTVPLAPIVVAVGLVGIVGPFKQPHKLFLQLYAVNLGGAAFLAVAAIVIRLFQPTPLPQAWVAYGYLALVAVVL FGCLIILPVELFRKTYRWQGDGITAFWGGLGSFFNFTDTKKTATNTQLEHRIGSPDPYDIKIGKLLLHQLQVDGILLTGV AIPYKKDSIRYDNILLCDRGIFVIEGKNYTGTIRGDTNSSWQTHTGSPIKSSRGENPLQQCDKQVMALKNFFAEYAVFVN GAVVFPSRASFALDHVQINTFPYSTAVPVFNESALVDAINKHRPPIGKSVPPQTVLRQMADRIMKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42828; Mature: 42828
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: PS50965 NERD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEALRKMGFSVSEVGRQLLIVFVRFSMSIIFLGIILGAYGWCFYWIQEWFNVIYLRSLGL CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFLQLDTKIVTVAMAAFQGSYTFPAGLTVPLAPIVVAVGLVGIVGPFKQPHKLFLQLYAV HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH NLGGAAFLAVAAIVIRLFQPTPLPQAWVAYGYLALVAVVLFGCLIILPVELFRKTYRWQG CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DGITAFWGGLGSFFNFTDTKKTATNTQLEHRIGSPDPYDIKIGKLLLHQLQVDGILLTGV CCCCHHHHHHHHHCCCCCCCCHHCCCHHHHCCCCCCCCEEHHHHHHHHHHHHCCEEEEEE AIPYKKDSIRYDNILLCDRGIFVIEGKNYTGTIRGDTNSSWQTHTGSPIKSSRGENPLQQ ECCCCCCCCCCCCEEEECCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHH CDKQVMALKNFFAEYAVFVNGAVVFPSRASFALDHVQINTFPYSTAVPVFNESALVDAIN HHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHH KHRPPIGKSVPPQTVLRQMADRIMKV HCCCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MEALRKMGFSVSEVGRQLLIVFVRFSMSIIFLGIILGAYGWCFYWIQEWFNVIYLRSLGL CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFLQLDTKIVTVAMAAFQGSYTFPAGLTVPLAPIVVAVGLVGIVGPFKQPHKLFLQLYAV HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH NLGGAAFLAVAAIVIRLFQPTPLPQAWVAYGYLALVAVVLFGCLIILPVELFRKTYRWQG CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DGITAFWGGLGSFFNFTDTKKTATNTQLEHRIGSPDPYDIKIGKLLLHQLQVDGILLTGV CCCCHHHHHHHHHCCCCCCCCHHCCCHHHHCCCCCCCCEEHHHHHHHHHHHHCCEEEEEE AIPYKKDSIRYDNILLCDRGIFVIEGKNYTGTIRGDTNSSWQTHTGSPIKSSRGENPLQQ ECCCCCCCCCCCCEEEECCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHH CDKQVMALKNFFAEYAVFVNGAVVFPSRASFALDHVQINTFPYSTAVPVFNESALVDAIN HHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHH KHRPPIGKSVPPQTVLRQMADRIMKV HCCCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA