Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
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Accession | NC_005125 |
Length | 4,659,019 |
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The map label for this gene is 37521537
Identifier: 37521537
GI number: 37521537
Start: 2114042
End: 2115466
Strand: Reverse
Name: 37521537
Synonym: gll1968
Alternate gene names: NA
Gene position: 2115466-2114042 (Counterclockwise)
Preceding gene: 37521540
Following gene: 37521536
Centisome position: 45.41
GC content: 42.18
Gene sequence:
>1425_bases ATGAAAGTCATGTCTACTACATCGCATAAAGCTGCTTACCTTCAGCAAGTAATCAAAGTTCTGGGCTTCGCCTCACTTGC TCTTTCTTGCAAAGTTGTACAGCAGCCTGTATATGCTCAATCCCCTGACCCAAGGGTTCCTGAGTTTTGCAGTCAAGTAG GAACTGACAATAAGCTAAAAAATCAATGCGACGACTTACGTCGCAAAGAAATTGAATATCTATCTCAACAGTTTGACGCA GCAATTTCTGCACAGAACAAACCGATTCTCCCCACTTCTGGAAAGGATGTTAAAGCTCTTGAAGGCAAAACCGAGATAGA AGGGAATGCTGGACAAATCGAAGCGACTATCCTTGCCTACAGCTCGATGGAATTGATTGCCCAAGCTATCCGAAAACAAA TAAAGGAACGAGCCAGCGACGTCAAGACCCTGATTATCGAAGACCCAGATGTAGTTAAATCACTCTCTAACTACGAATTG CTCAGGGAAATTGGTTCAAGTCTCATAGCTGCATACGCTAATATCTTCGACTCCCCACTTGTTCCAGATAAAATGATCGA GAAATCTTTTGATGAAATGGGCAAGGGATCTAAAAAGCGCTTATATAAGAAATCTTTTGAGGGAGGAGTTGATCTCGACT TACCACTCTCGATAGCAAGCTCGACCATTCGGGCAGTCGCTGATATTTTTTCATTATTTAAACAAGATATCACCATCAAG CCCACTAACATAAGCCTGGAGGACAATGCGCGGGAGGCTCTTATCTCGCAACTCGCTGCTGATTTTCAACAATGCAATGA AAGCAGATGTACTAACGTGTATCATCCTTCTTTGCTGCTGCTTGATCTTACACATTATCGCGAAGAATTTTCTGACAAAG AAAAAATGAGCAAGAATCATTTGGACAGAATATTGAGAGATTTCGTAATTCTACTTGCTTACAAGCAAATGGCTGACTCA AAGATAACCGAGTTAAAGGATAATTCGGATCTAGAAAGCAAACAGCTTGTCCGAAAACTAACGGATCTCGGCGCTTCAAC CAATATTTTTCTGAGTGGCTTGGGTTCAACGGAATTCGCCATTTATTCCTTGGCTAAAGGAGCAAAAATCGAAGATCTTC TGAAAGATGAAGGCACTTACTTGCTTCGACTCAATGTAATTAACTCGGGCGGAAGTACGCAAGCAAAACAAAACTTATTC TTTACCAGCGATCCCGCATATAACGGTGGAGTGGCTGTAACTTATATGCTCTTTGCACGGGATGGTTCAATCCGTCTGAG TGACACGCTGTATAAAACAAGTGGTTATTTGCATGTAACCAGTGAAACAACCAATATCTATCGAGCTCGCAAATTCAATG CCGAAAGACCAATGCCGACCGCCGCACAAACTAAAGAAACGGAACCGGTCTCTCAAATTCCATAA
Upstream 100 bases:
>100_bases TGCATATCTACAACTCTGATACCACGGAAACTCCAGTGTCCATGCATATTTTTCGTTGGACCAACATAAGTAACATCAAG GTTTTCTTTAAACACTGGAG
Downstream 100 bases:
>100_bases CAGGCGGCTCTAGGCATCTAAGCAGTAGATTGGTGTGAGCCTGCGGACAATTCAGTGGAGATGTGCTGACGAACGAGACG CAGTCGGACGGCACAATCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 474; Mature: 474
Protein sequence:
>474_residues MKVMSTTSHKAAYLQQVIKVLGFASLALSCKVVQQPVYAQSPDPRVPEFCSQVGTDNKLKNQCDDLRRKEIEYLSQQFDA AISAQNKPILPTSGKDVKALEGKTEIEGNAGQIEATILAYSSMELIAQAIRKQIKERASDVKTLIIEDPDVVKSLSNYEL LREIGSSLIAAYANIFDSPLVPDKMIEKSFDEMGKGSKKRLYKKSFEGGVDLDLPLSIASSTIRAVADIFSLFKQDITIK PTNISLEDNAREALISQLAADFQQCNESRCTNVYHPSLLLLDLTHYREEFSDKEKMSKNHLDRILRDFVILLAYKQMADS KITELKDNSDLESKQLVRKLTDLGASTNIFLSGLGSTEFAIYSLAKGAKIEDLLKDEGTYLLRLNVINSGGSTQAKQNLF FTSDPAYNGGVAVTYMLFARDGSIRLSDTLYKTSGYLHVTSETTNIYRARKFNAERPMPTAAQTKETEPVSQIP
Sequences:
>Translated_474_residues MKVMSTTSHKAAYLQQVIKVLGFASLALSCKVVQQPVYAQSPDPRVPEFCSQVGTDNKLKNQCDDLRRKEIEYLSQQFDA AISAQNKPILPTSGKDVKALEGKTEIEGNAGQIEATILAYSSMELIAQAIRKQIKERASDVKTLIIEDPDVVKSLSNYEL LREIGSSLIAAYANIFDSPLVPDKMIEKSFDEMGKGSKKRLYKKSFEGGVDLDLPLSIASSTIRAVADIFSLFKQDITIK PTNISLEDNAREALISQLAADFQQCNESRCTNVYHPSLLLLDLTHYREEFSDKEKMSKNHLDRILRDFVILLAYKQMADS KITELKDNSDLESKQLVRKLTDLGASTNIFLSGLGSTEFAIYSLAKGAKIEDLLKDEGTYLLRLNVINSGGSTQAKQNLF FTSDPAYNGGVAVTYMLFARDGSIRLSDTLYKTSGYLHVTSETTNIYRARKFNAERPMPTAAQTKETEPVSQIP >Mature_474_residues MKVMSTTSHKAAYLQQVIKVLGFASLALSCKVVQQPVYAQSPDPRVPEFCSQVGTDNKLKNQCDDLRRKEIEYLSQQFDA AISAQNKPILPTSGKDVKALEGKTEIEGNAGQIEATILAYSSMELIAQAIRKQIKERASDVKTLIIEDPDVVKSLSNYEL LREIGSSLIAAYANIFDSPLVPDKMIEKSFDEMGKGSKKRLYKKSFEGGVDLDLPLSIASSTIRAVADIFSLFKQDITIK PTNISLEDNAREALISQLAADFQQCNESRCTNVYHPSLLLLDLTHYREEFSDKEKMSKNHLDRILRDFVILLAYKQMADS KITELKDNSDLESKQLVRKLTDLGASTNIFLSGLGSTEFAIYSLAKGAKIEDLLKDEGTYLLRLNVINSGGSTQAKQNLF FTSDPAYNGGVAVTYMLFARDGSIRLSDTLYKTSGYLHVTSETTNIYRARKFNAERPMPTAAQTKETEPVSQIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52682; Mature: 52682
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVMSTTSHKAAYLQQVIKVLGFASLALSCKVVQQPVYAQSPDPRVPEFCSQVGTDNKLK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHH NQCDDLRRKEIEYLSQQFDAAISAQNKPILPTSGKDVKALEGKTEIEGNAGQIEATILAY HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCEEEEEEEEH SSMELIAQAIRKQIKERASDVKTLIIEDPDVVKSLSNYELLREIGSSLIAAYANIFDSPL HHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VPDKMIEKSFDEMGKGSKKRLYKKSFEGGVDLDLPLSIASSTIRAVADIFSLFKQDITIK CCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEC PTNISLEDNAREALISQLAADFQQCNESRCTNVYHPSLLLLDLTHYREEFSDKEKMSKNH CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LDRILRDFVILLAYKQMADSKITELKDNSDLESKQLVRKLTDLGASTNIFLSGLGSTEFA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHH IYSLAKGAKIEDLLKDEGTYLLRLNVINSGGSTQAKQNLFFTSDPAYNGGVAVTYMLFAR HHHHHCCCHHHHHHHCCCCEEEEEEEECCCCCCHHHCCEEEECCCCCCCCEEEEEEEEEC DGSIRLSDTLYKTSGYLHVTSETTNIYRARKFNAERPMPTAAQTKETEPVSQIP CCCEEEEHHHEECCCEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKVMSTTSHKAAYLQQVIKVLGFASLALSCKVVQQPVYAQSPDPRVPEFCSQVGTDNKLK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHH NQCDDLRRKEIEYLSQQFDAAISAQNKPILPTSGKDVKALEGKTEIEGNAGQIEATILAY HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCEEEEEEEEH SSMELIAQAIRKQIKERASDVKTLIIEDPDVVKSLSNYELLREIGSSLIAAYANIFDSPL HHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VPDKMIEKSFDEMGKGSKKRLYKKSFEGGVDLDLPLSIASSTIRAVADIFSLFKQDITIK CCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEC PTNISLEDNAREALISQLAADFQQCNESRCTNVYHPSLLLLDLTHYREEFSDKEKMSKNH CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LDRILRDFVILLAYKQMADSKITELKDNSDLESKQLVRKLTDLGASTNIFLSGLGSTEFA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHH IYSLAKGAKIEDLLKDEGTYLLRLNVINSGGSTQAKQNLFFTSDPAYNGGVAVTYMLFAR HHHHHCCCHHHHHHHCCCCEEEEEEEECCCCCCHHHCCEEEECCCCCCCCEEEEEEEEEC DGSIRLSDTLYKTSGYLHVTSETTNIYRARKFNAERPMPTAAQTKETEPVSQIP CCCEEEEHHHEECCCEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA