Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
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Accession | NC_005125 |
Length | 4,659,019 |
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The map label for this gene is sfsA
Identifier: 37521303
GI number: 37521303
Start: 1840477
End: 1841187
Strand: Reverse
Name: sfsA
Synonym: gll1734
Alternate gene names: 37521303
Gene position: 1841187-1840477 (Counterclockwise)
Preceding gene: 37521304
Following gene: 37521302
Centisome position: 39.52
GC content: 62.59
Gene sequence:
>711_bases ATGAGTGTGCTTTTTGAGTACCCGCCCCTGGTACGGGGGATCCTGCGCCGTCGCTACAAGCGATTTTTTGCCGAGGTTGA ACTGGAGGACGGGCAACTGGTCACCGCCCACTGCCCGAACACCGGTCCGATGCGGGCCATCAGCACCCTCGGAAGTCCGG TATATCTGTCGCGCTCACCGGATCCGGCCCGCAAGCTCGCCTACACCTGGGAGATGATCGACCTAGACGGCACCTGGGTC GGGGTGAATACGGCCCTTCCCAACCGCATCGTCTACCGGGCTCTGGTGGAGCGGGTGATTGCCGAGGTGGGCACTTACCG GACCATTCGCCGCGAAGTGCCTTACGGTAGTGAAAACAGCCGCATCGATTTTTTGCTCACCGGCGAGGGGGAGCCGCTGT ACCTGGAGGTCAAGAGCACTACCCTCAACCAGGGCACCCTCGCCCTGTTTCCGGATACGGTCACCACCCGCGGCCAGAAA CACCTGCGCGAACTGATCCGCCTTTGTGAGCACGGCACGCGGGCAGCGATGCTGTACTTCATCAACCGCGGTGACTGCAC GGCCTTCAGCCCGGGCGATTCCCTCGATCCGCTTTATGGACAACTGCTGCGTGCCGGTATCGAGCGCGGTCTGCTGGTCT TGCCCTGCCGCTTCGAGATCACCCCCCAATCGGTGCGCTACCTGGGTACGGCCTCGATTCTGCTTGCCTGA
Upstream 100 bases:
>100_bases TGGCGAGCGTCGAGCGGCTGGGTGCCTACTCCTACCGCCATATCTGTCCCGGGGCGGCCACGGGATTGTTGCGTTCCCGG CGCACCATCGTCGTCGAACC
Downstream 100 bases:
>100_bases GGGAAGCCGGATAGCAGGGGGGTAAGTTACCATCGGTGCCAGTCTTTGCGATTCATCGGGGCTTTCTATGCGCCTTCTCC CTCAGTGGCTCTGGCTCGCG
Product: sugar fermentation stimulation protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MSVLFEYPPLVRGILRRRYKRFFAEVELEDGQLVTAHCPNTGPMRAISTLGSPVYLSRSPDPARKLAYTWEMIDLDGTWV GVNTALPNRIVYRALVERVIAEVGTYRTIRREVPYGSENSRIDFLLTGEGEPLYLEVKSTTLNQGTLALFPDTVTTRGQK HLRELIRLCEHGTRAAMLYFINRGDCTAFSPGDSLDPLYGQLLRAGIERGLLVLPCRFEITPQSVRYLGTASILLA
Sequences:
>Translated_236_residues MSVLFEYPPLVRGILRRRYKRFFAEVELEDGQLVTAHCPNTGPMRAISTLGSPVYLSRSPDPARKLAYTWEMIDLDGTWV GVNTALPNRIVYRALVERVIAEVGTYRTIRREVPYGSENSRIDFLLTGEGEPLYLEVKSTTLNQGTLALFPDTVTTRGQK HLRELIRLCEHGTRAAMLYFINRGDCTAFSPGDSLDPLYGQLLRAGIERGLLVLPCRFEITPQSVRYLGTASILLA >Mature_235_residues SVLFEYPPLVRGILRRRYKRFFAEVELEDGQLVTAHCPNTGPMRAISTLGSPVYLSRSPDPARKLAYTWEMIDLDGTWVG VNTALPNRIVYRALVERVIAEVGTYRTIRREVPYGSENSRIDFLLTGEGEPLYLEVKSTTLNQGTLALFPDTVTTRGQKH LRELIRLCEHGTRAAMLYFINRGDCTAFSPGDSLDPLYGQLLRAGIERGLLVLPCRFEITPQSVRYLGTASILLA
Specific function: Probable Regulatory Factor Involved In Maltose Metabolism. [C]
COG id: COG1489
COG function: function code R; DNA-binding protein, stimulates sugar fermentation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sfsA family
Homologues:
Organism=Escherichia coli, GI1786340, Length=220, Percent_Identity=41.8181818181818, Blast_Score=181, Evalue=4e-47,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): SFSA_GLOVI (Q7NJU8)
Other databases:
- EMBL: BA000045 - RefSeq: NP_924680.1 - GeneID: 2600136 - GenomeReviews: BA000045_GR - KEGG: gvi:gll1734 - NMPDR: fig|251221.1.peg.1734 - HOGENOM: HBG655520 - OMA: NTGSMLN - ProtClustDB: PRK00347 - BioCyc: GVIO251221:GLL1734-MONOMER - HAMAP: MF_00095 - InterPro: IPR005224 - TIGRFAMs: TIGR00230
Pfam domain/function: PF03749 SfsA
EC number: NA
Molecular weight: Translated: 26538; Mature: 26407
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLFEYPPLVRGILRRRYKRFFAEVELEDGQLVTAHCPNTGPMRAISTLGSPVYLSRSP CCEEECCCHHHHHHHHHHHHHHHHEEEECCCEEEEEECCCCCHHHHHHHCCCCEEEECCC DPARKLAYTWEMIDLDGTWVGVNTALPNRIVYRALVERVIAEVGTYRTIRREVPYGSENS CHHHHHEEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCC RIDFLLTGEGEPLYLEVKSTTLNQGTLALFPDTVTTRGQKHLRELIRLCEHGTRAAMLYF EEEEEEECCCCEEEEEEECCCCCCCEEEEECCCHHCCCHHHHHHHHHHHCCCCCEEEEEE INRGDCTAFSPGDSLDPLYGQLLRAGIERGLLVLPCRFEITPQSVRYLGTASILLA EECCCEEEECCCCCCCHHHHHHHHHHHHCCEEEEEEEEEECHHHHHHHCCEEEEEC >Mature Secondary Structure SVLFEYPPLVRGILRRRYKRFFAEVELEDGQLVTAHCPNTGPMRAISTLGSPVYLSRSP CEEECCCHHHHHHHHHHHHHHHHEEEECCCEEEEEECCCCCHHHHHHHCCCCEEEECCC DPARKLAYTWEMIDLDGTWVGVNTALPNRIVYRALVERVIAEVGTYRTIRREVPYGSENS CHHHHHEEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCC RIDFLLTGEGEPLYLEVKSTTLNQGTLALFPDTVTTRGQKHLRELIRLCEHGTRAAMLYF EEEEEEECCCCEEEEEEECCCCCCCEEEEECCCHHCCCHHHHHHHHHHHCCCCCEEEEEE INRGDCTAFSPGDSLDPLYGQLLRAGIERGLLVLPCRFEITPQSVRYLGTASILLA EECCCEEEECCCCCCCHHHHHHHHHHHHCCEEEEEEEEEECHHHHHHHCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14621292