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The map label for this gene is crtO [H]

Identifier: 37521297

GI number: 37521297

Start: 1833712

End: 1834485

Strand: Reverse

Name: crtO [H]

Synonym: gvip239

Alternate gene names: 37521297

Gene position: 1834485-1833712 (Counterclockwise)

Preceding gene: 37521301

Following gene: 37521294

Centisome position: 39.37

GC content: 57.62

Gene sequence:

>774_bases
ATGATGCGTGGCTCGGCAGTAAAGGAACGTACTTCGAAGCGGCTTGCCGAAGGGGTTATCACCCATAAGAACGATTCTTC
CGGCCTCTGGTGGGCTCTGGTGATTATCGGCCTGTGGATCTTCAGTTTCGCCGCAGCGCTGCGCTTACCTATTGGCGAGT
TATCGCTGCAGGCCGTCATCGGCGTGGTGATCCTCAGAACCTTTCTGCACACAGGTCTATTTATCACTGCCCACGACGCG
ATGCACCGAACCGTGTTTCCCGCCAATCACCGCATCAACGATTGGCTTGGTACCGCCGCCGTCGGTCTGTACGCCTTTAT
GCCCTATCGCGAACTACTGATTAAACATCAGTTGCACCACCGCTTTCCAGCCACCGGCAAAGACCCCGACTACCACGACG
GCGAACATAGCGGCTTCTTTCAGTGGTACTTGAAATTCATGAAGGACTATATGGAGAGCCGGAACACCCCGTTTTTGATC
GCGGGCATGGCCGTGGTGTTCGGGGTGTGCACTTGGCTGATGGGCGTTCCGCTCGTCAACCTGGCGCTGTTCTGGTTGTT
GCCGCTGGTGCTCAGTTCCTTGCAATTGTTCTACTTCGGCACCTACTTGCCCCACCGACAACCCGACGGCGGCTACCGCA
ACCGTCACCGGGCCACCAGCAACCGTCTTTCGAGCTTCTGGTCATTTGTCAGCTGCTATCACTTCGGCTACCACTGGGAG
CACCACGAATACCCGCTCGTTCCCTGGCATCGGCTGCCCGAGGCGCGCCGCTAG

Upstream 100 bases:

>100_bases
GGTATGCACGCTTAAGATGCAAATAGAAATGATCGCTTTCGCCGCAGGCGACGCAGTCTGCAGGCTGGAGGCAAAGTTTT
ATTTCGGGTCTACAAGGTCT

Downstream 100 bases:

>100_bases
GGCATTTCGGAATTGCCTTTGCAAAATCCCAGGCCGGTTCTAGCCACACGCACCAGCAACCGAAATCCAAAGATATAGCT
GTCGCCATTTAAGTTAGGAC

Product: beta-carotene ketolase

Products: NA

Alternate protein names: Beta-carotene oxygenase [H]

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MMRGSAVKERTSKRLAEGVITHKNDSSGLWWALVIIGLWIFSFAAALRLPIGELSLQAVIGVVILRTFLHTGLFITAHDA
MHRTVFPANHRINDWLGTAAVGLYAFMPYRELLIKHQLHHRFPATGKDPDYHDGEHSGFFQWYLKFMKDYMESRNTPFLI
AGMAVVFGVCTWLMGVPLVNLALFWLLPLVLSSLQLFYFGTYLPHRQPDGGYRNRHRATSNRLSSFWSFVSCYHFGYHWE
HHEYPLVPWHRLPEARR

Sequences:

>Translated_257_residues
MMRGSAVKERTSKRLAEGVITHKNDSSGLWWALVIIGLWIFSFAAALRLPIGELSLQAVIGVVILRTFLHTGLFITAHDA
MHRTVFPANHRINDWLGTAAVGLYAFMPYRELLIKHQLHHRFPATGKDPDYHDGEHSGFFQWYLKFMKDYMESRNTPFLI
AGMAVVFGVCTWLMGVPLVNLALFWLLPLVLSSLQLFYFGTYLPHRQPDGGYRNRHRATSNRLSSFWSFVSCYHFGYHWE
HHEYPLVPWHRLPEARR
>Mature_257_residues
MMRGSAVKERTSKRLAEGVITHKNDSSGLWWALVIIGLWIFSFAAALRLPIGELSLQAVIGVVILRTFLHTGLFITAHDA
MHRTVFPANHRINDWLGTAAVGLYAFMPYRELLIKHQLHHRFPATGKDPDYHDGEHSGFFQWYLKFMKDYMESRNTPFLI
AGMAVVFGVCTWLMGVPLVNLALFWLLPLVLSSLQLFYFGTYLPHRQPDGGYRNRHRATSNRLSSFWSFVSCYHFGYHWE
HHEYPLVPWHRLPEARR

Specific function: Converts beta-carotene to canthaxanthin via echinenone [H]

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005804 [H]

Pfam domain/function: PF00487 FA_desaturase [H]

EC number: NA

Molecular weight: Translated: 29811; Mature: 29811

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCHHCCCCCCC
>Mature Secondary Structure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CCCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7592436 [H]