Click here to switch to the map view.

The map label for this gene is 37521265

Identifier: 37521265

GI number: 37521265

Start: 1806622

End: 1807062

Strand: Reverse

Name: 37521265

Synonym: gll1696

Alternate gene names: NA

Gene position: 1807062-1806622 (Counterclockwise)

Preceding gene: 37521266

Following gene: 37521264

Centisome position: 38.79

GC content: 51.93

Gene sequence:

>441_bases
ATGAACGCTAAAGTTTTTCTTGACACGAATATTTTGGTATATGTCTACGATCCTTTTGACGCTGCTAAGCAAGCGAGGTC
CATCGCAATTGTCGACGGTTTGGTGCGCACGGCCCGGGCCGTTGTGAGTACCCAGGTGCTTGGGGAATTCATTGCAGCTA
CCACCCGGACTAGGCGGCAGTTACTCAGCGCTGAGGAAGCCATTGAACGCGTGCGGAGGTATTTGTCTACTTTTGAGGTG
GTCGATGTGACGCCGTTTGTGGTCCTGGAAGCTCTGCGAGGAGTTGAAATGCACCGGTTCGAGTTTTGGGACGCCCAGAT
TTGGGCAGCTGCTCGCCTCAACCAAATTCCATCTGTATACAGCGAAGATTTCAACCCAAGTTCGACAATCGAGGGAGTGT
TATTCACCAACCCGCTGTCTGCGGACTTCCGTCTACAATGA

Upstream 100 bases:

>100_bases
CCCAGCCTCGATGCGTGGGAAAAGGAAAAAGCGTTCATTGCCGAAATTCAAAAGCGAGTTCCCTTGCCCGGGGGTCGCGA
TTGGAATCGCACAGACCTCC

Downstream 100 bases:

>100_bases
ACCGAAGGTTTGAAGTTTAATCCATTCTTAACCTTATGCCGGTTGTACCCGCGTTGTGGAGGAACTTGGGAAATGCCAAA
CGAGCCGGAGGATCCCGACG

Product: hypothetical protein

Products: NA

Alternate protein names: PilT Protein Domain Protein; PIN Domain Protein; PilT Protein-Like

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MNAKVFLDTNILVYVYDPFDAAKQARSIAIVDGLVRTARAVVSTQVLGEFIAATTRTRRQLLSAEEAIERVRRYLSTFEV
VDVTPFVVLEALRGVEMHRFEFWDAQIWAAARLNQIPSVYSEDFNPSSTIEGVLFTNPLSADFRLQ

Sequences:

>Translated_146_residues
MNAKVFLDTNILVYVYDPFDAAKQARSIAIVDGLVRTARAVVSTQVLGEFIAATTRTRRQLLSAEEAIERVRRYLSTFEV
VDVTPFVVLEALRGVEMHRFEFWDAQIWAAARLNQIPSVYSEDFNPSSTIEGVLFTNPLSADFRLQ
>Mature_146_residues
MNAKVFLDTNILVYVYDPFDAAKQARSIAIVDGLVRTARAVVSTQVLGEFIAATTRTRRQLLSAEEAIERVRRYLSTFEV
VDVTPFVVLEALRGVEMHRFEFWDAQIWAAARLNQIPSVYSEDFNPSSTIEGVLFTNPLSADFRLQ

Specific function: Unknown

COG id: COG5573

COG function: function code R; Predicted nucleic-acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16531; Mature: 16531

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAKVFLDTNILVYVYDPFDAAKQARSIAIVDGLVRTARAVVSTQVLGEFIAATTRTRRQ
CCCEEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLSAEEAIERVRRYLSTFEVVDVTPFVVLEALRGVEMHRFEFWDAQIWAAARLNQIPSVY
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHH
SEDFNPSSTIEGVLFTNPLSADFRLQ
HCCCCCCCCCCEEEEECCCCCCCCCC
>Mature Secondary Structure
MNAKVFLDTNILVYVYDPFDAAKQARSIAIVDGLVRTARAVVSTQVLGEFIAATTRTRRQ
CCCEEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLSAEEAIERVRRYLSTFEVVDVTPFVVLEALRGVEMHRFEFWDAQIWAAARLNQIPSVY
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHH
SEDFNPSSTIEGVLFTNPLSADFRLQ
HCCCCCCCCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA