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The map label for this gene is nrtA [H]

Identifier: 37521136

GI number: 37521136

Start: 1686651

End: 1687934

Strand: Direct

Name: nrtA [H]

Synonym: gvip214

Alternate gene names: 37521136

Gene position: 1686651-1687934 (Clockwise)

Preceding gene: 37521135

Following gene: 37521137

Centisome position: 36.2

GC content: 63.16

Gene sequence:

>1284_bases
ATGCCCGAAGATTCCGCCCAGTTCACGCTCACCCGCCGCGGCTTGCTCCAGGCAGCCGCGGCGGCCACGGTCGGTTCGCT
GCTGACCCCCGGTTATGTGGGGGCGGCCGACGCCCCTGAGACCACCAAGGCCCGGCTTGGATTTATTTCGCTCAGCGACT
GCGCGCCGCTGGTGATCGCCAAAGAAAAAGGTCTGTTCGACAAATACGGCATGAAGGACGTCGAGGTCGCCAAGCAGGCG
TCGTGGGGGGTGACCCGCGACAACCTCGAACTGGGTGCCGGGGGCGGCGGTATCGACGGCGCCCACATCCTCACGCCGAT
GGTGTATCTGATTGCCAACGGCAACATCACCAAAGGCAGTAAGAAAGTGCCGATGTTCATCCTGGCCAGGCTCAACGTCA
ACGGCCAGGGCATCTCGGTGGCCAACAAATATAAGCTCCTCAAGGTGGGCCTCGACGCCGCGCCGATGAAGGCAGAAGCG
CTCAAGGCCAAAGCCAACGGCGATCCGATTACCGTCGCTCAGACTTTCCCGGGGGGCACCCACTGGGCGTGGCTGCGCTA
CTGGCTCGCCGCTGGCGGCATCGACCCGGAGACCGACGTCAAGATGATCACCGTGCCGCCCCCGCAGATGGTGGCCAACA
TGAAGACCGGCGTCACCGACGCTTTTTGCGTGGGCGAGCCGTGGCACCAGCAGCTCATCAACCAGCAGATCGGCTACACG
GCGGTGACCACCGGCCAAATCTGGAACCGCCACCCGGAAAAATCCTTTGCCCTGCGCGCCGACTACGTCGAGAAATATCC
GAAGGCGACAAAAGCGCTGTTGATGGCGGTGCAGGAGGCCCAGATCTGGGCCGACAAGGCCGAGAACAAGGACGAACTGG
CCCAGGTTGTCAGCAAGCGCAGCTGGATAGGCGCCCCGGTCTCCGACATCGTGGCGCGCTACAAGGGCATCATCGACTAC
GGCGACGGTCGGCCGGTGGAGCGCAACAGCCCCCACATCATGCAGTTCTGGAAAGATTTTGCTTCTTACCCTTATCAGAG
CCACGATCTGTGGTTTTTGACCGAGGACATCCGCTGGGGCGTCCTGCCCGCGACCACCGACACCAAAAAGCTGGTGGCGG
CGGTCAACCGCGAGGATCTCTGGCGCGAGGCGGCCAAGGCCCTGGGCCAGCCGGCTCCCAAAGGCACCTCCCGGGGTGTC
GAAAAATTCTTCGACGGCGTCGCCTTCGACCCGACCAAGCCGGAAGCGTACCTCAAGAGCGTCAAGCTCAAGAAACTGGC
CTGA

Upstream 100 bases:

>100_bases
AATGTTGCGATCCTGGGATTTTGTGTATCAGAAAACACGATTAGGCCGCGGTACAGCGTGTTTCCTGATGTAAACAAAGG
CCAGATTGCAGACTTCCGCC

Downstream 100 bases:

>100_bases
ACGACCGGGCCTCTCACTAGCGGGAAAAATTCATGACGACGACAAACGAGACGGCCATCGCCCCGGCGCGGGGCGAAGCA
GCCGGAACCAGTCCCCAGGT

Product: nitrate/nitrite transport system substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 426

Protein sequence:

>427_residues
MPEDSAQFTLTRRGLLQAAAAATVGSLLTPGYVGAADAPETTKARLGFISLSDCAPLVIAKEKGLFDKYGMKDVEVAKQA
SWGVTRDNLELGAGGGGIDGAHILTPMVYLIANGNITKGSKKVPMFILARLNVNGQGISVANKYKLLKVGLDAAPMKAEA
LKAKANGDPITVAQTFPGGTHWAWLRYWLAAGGIDPETDVKMITVPPPQMVANMKTGVTDAFCVGEPWHQQLINQQIGYT
AVTTGQIWNRHPEKSFALRADYVEKYPKATKALLMAVQEAQIWADKAENKDELAQVVSKRSWIGAPVSDIVARYKGIIDY
GDGRPVERNSPHIMQFWKDFASYPYQSHDLWFLTEDIRWGVLPATTDTKKLVAAVNREDLWREAAKALGQPAPKGTSRGV
EKFFDGVAFDPTKPEAYLKSVKLKKLA

Sequences:

>Translated_427_residues
MPEDSAQFTLTRRGLLQAAAAATVGSLLTPGYVGAADAPETTKARLGFISLSDCAPLVIAKEKGLFDKYGMKDVEVAKQA
SWGVTRDNLELGAGGGGIDGAHILTPMVYLIANGNITKGSKKVPMFILARLNVNGQGISVANKYKLLKVGLDAAPMKAEA
LKAKANGDPITVAQTFPGGTHWAWLRYWLAAGGIDPETDVKMITVPPPQMVANMKTGVTDAFCVGEPWHQQLINQQIGYT
AVTTGQIWNRHPEKSFALRADYVEKYPKATKALLMAVQEAQIWADKAENKDELAQVVSKRSWIGAPVSDIVARYKGIIDY
GDGRPVERNSPHIMQFWKDFASYPYQSHDLWFLTEDIRWGVLPATTDTKKLVAAVNREDLWREAAKALGQPAPKGTSRGV
EKFFDGVAFDPTKPEAYLKSVKLKKLA
>Mature_426_residues
PEDSAQFTLTRRGLLQAAAAATVGSLLTPGYVGAADAPETTKARLGFISLSDCAPLVIAKEKGLFDKYGMKDVEVAKQAS
WGVTRDNLELGAGGGGIDGAHILTPMVYLIANGNITKGSKKVPMFILARLNVNGQGISVANKYKLLKVGLDAAPMKAEAL
KAKANGDPITVAQTFPGGTHWAWLRYWLAAGGIDPETDVKMITVPPPQMVANMKTGVTDAFCVGEPWHQQLINQQIGYTA
VTTGQIWNRHPEKSFALRADYVEKYPKATKALLMAVQEAQIWADKAENKDELAQVVSKRSWIGAPVSDIVARYKGIIDYG
DGRPVERNSPHIMQFWKDFASYPYQSHDLWFLTEDIRWGVLPATTDTKKLVAAVNREDLWREAAKALGQPAPKGTSRGVE
KFFDGVAFDPTKPEAYLKSVKLKKLA

Specific function: Essential component of the nitrate-transporting system. May be the substrate-binding protein [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CmpA/NrtA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006311 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46543; Mature: 46412

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEDSAQFTLTRRGLLQAAAAATVGSLLTPGYVGAADAPETTKARLGFISLSDCAPLVIA
CCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHEEEEEECCCCCEEEE
KEKGLFDKYGMKDVEVAKQASWGVTRDNLELGAGGGGIDGAHILTPMVYLIANGNITKGS
CCCCCHHHCCCCHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHHEEECCCCCCCC
KKVPMFILARLNVNGQGISVANKYKLLKVGLDAAPMKAEALKAKANGDPITVAQTFPGGT
CCCCEEEEEEECCCCCCEEECCCEEEEEECCCCCCCHHHHHHHCCCCCCEEEEEECCCCC
HWAWLRYWLAAGGIDPETDVKMITVPPPQMVANMKTGVTDAFCVGEPWHQQLINQQIGYT
HHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHCCCCCEEECCCHHHHHHHHHCCCCE
AVTTGQIWNRHPEKSFALRADYVEKYPKATKALLMAVQEAQIWADKAENKDELAQVVSKR
EEEECHHHCCCCCHHHHEEHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
SWIGAPVSDIVARYKGIIDYGDGRPVERNSPHIMQFWKDFASYPYQSHDLWFLTEDIRWG
CCCCCCHHHHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCC
VLPATTDTKKLVAAVNREDLWREAAKALGQPAPKGTSRGVEKFFDGVAFDPTKPEAYLKS
EECCCCCHHHHHHHHCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHH
VKLKKLA
HHHHHCC
>Mature Secondary Structure 
PEDSAQFTLTRRGLLQAAAAATVGSLLTPGYVGAADAPETTKARLGFISLSDCAPLVIA
CCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHEEEEEECCCCCEEEE
KEKGLFDKYGMKDVEVAKQASWGVTRDNLELGAGGGGIDGAHILTPMVYLIANGNITKGS
CCCCCHHHCCCCHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHHEEECCCCCCCC
KKVPMFILARLNVNGQGISVANKYKLLKVGLDAAPMKAEALKAKANGDPITVAQTFPGGT
CCCCEEEEEEECCCCCCEEECCCEEEEEECCCCCCCHHHHHHHCCCCCCEEEEEECCCCC
HWAWLRYWLAAGGIDPETDVKMITVPPPQMVANMKTGVTDAFCVGEPWHQQLINQQIGYT
HHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHCCCCCEEECCCHHHHHHHHHCCCCE
AVTTGQIWNRHPEKSFALRADYVEKYPKATKALLMAVQEAQIWADKAENKDELAQVVSKR
EEEECHHHCCCCCHHHHEEHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
SWIGAPVSDIVARYKGIIDYGDGRPVERNSPHIMQFWKDFASYPYQSHDLWFLTEDIRWG
CCCCCCHHHHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCC
VLPATTDTKKLVAAVNREDLWREAAKALGQPAPKGTSRGVEKFFDGVAFDPTKPEAYLKS
EECCCCCHHHHHHHHCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHH
VKLKKLA
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]