Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
---|---|
Accession | NC_005125 |
Length | 4,659,019 |
Click here to switch to the map view.
The map label for this gene is 37521129
Identifier: 37521129
GI number: 37521129
Start: 1680955
End: 1681734
Strand: Direct
Name: 37521129
Synonym: glr1560
Alternate gene names: NA
Gene position: 1680955-1681734 (Clockwise)
Preceding gene: 37521128
Following gene: 37521133
Centisome position: 36.08
GC content: 65.13
Gene sequence:
>780_bases ATGACCACCGACCGGCCGCCGCGGCGCTCACTTCCCACCATGTATGATCTTCCCAGTGAAGAGGTGGGTCAGCCCGGATT GCCCGACGAATACCATCTGCGCCAGGCGCAGCTTTTGACCGAGACCTTTCGGCCCACGACCCACCCGGCCGAGCGGATCT TCACCGCCTGCGACGTCAATTTGTACTACGATCCGCTTCACACCGGCTATTACAAGCGTCCCGACTGGTACGCGGTGGTG GATGTGCCGTCGCTGTACCTGGGTCAGGATATGCGCAGAAGCTACGTGCTCTGGGACGAGCAGGTGCGTCCGCTGGTGAT TGTCGAATTGCTCTCGCCCGGCACCGAGGATGAAGATCTGGGCCTCCGGCCGCGCAGACCCGGGGAACCCCCCACCAAGT GGGAAGCCTACGCGCAGTACGTGCGGGTGCCCTACTACGTGGTCTTCGACGGGGCGACCTGTGAATTGCGGGTGTTCCGC CCGCGCGAAGGCACCTTCGTACCCCGGCGCATCAAAGACGAGCGTGTGTGGGTGCGGGAGGTGCAGTTGTCCCTGGGCAT CTGGCGCGGCGAATACTTCGGCTGCCGCCGGGCTTGGCTGCGCTGGCGCGACGGCGAAGGCAACTGGGTTCTCACCCCGG CCGAGCAAGAACGAGCACGGGCCGAGCAAGAAAAAGCGCGCGCTGAACAAGAAAAAGCGAGGGCCGACCTGGCCGAGCGG CGGGCGGCGGCGATGGCCGAGCGGTTGCGGGCGTTGGGTGTCGATCCTGACGACCTGTAA
Upstream 100 bases:
>100_bases GCCCGGGCGCTCGACGAAGGGCTCGCCTGGCGGCAACTCGAAAAGCTGCGCTAGCTTCCCAACCAGGCTTTAATAGGGAC AGACGTCCTGGAAGTTGCCG
Downstream 100 bases:
>100_bases TCGAGCGTTTAGCTTTCGAAGCGGACCTCTTCGTAGACTTGGGCCATCGAGACACGCAGATCCAGGCTGGCAAAGCGGAT TTCGTGGTCTTCTTCAGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MTTDRPPRRSLPTMYDLPSEEVGQPGLPDEYHLRQAQLLTETFRPTTHPAERIFTACDVNLYYDPLHTGYYKRPDWYAVV DVPSLYLGQDMRRSYVLWDEQVRPLVIVELLSPGTEDEDLGLRPRRPGEPPTKWEAYAQYVRVPYYVVFDGATCELRVFR PREGTFVPRRIKDERVWVREVQLSLGIWRGEYFGCRRAWLRWRDGEGNWVLTPAEQERARAEQEKARAEQEKARADLAER RAAAMAERLRALGVDPDDL
Sequences:
>Translated_259_residues MTTDRPPRRSLPTMYDLPSEEVGQPGLPDEYHLRQAQLLTETFRPTTHPAERIFTACDVNLYYDPLHTGYYKRPDWYAVV DVPSLYLGQDMRRSYVLWDEQVRPLVIVELLSPGTEDEDLGLRPRRPGEPPTKWEAYAQYVRVPYYVVFDGATCELRVFR PREGTFVPRRIKDERVWVREVQLSLGIWRGEYFGCRRAWLRWRDGEGNWVLTPAEQERARAEQEKARAEQEKARADLAER RAAAMAERLRALGVDPDDL >Mature_258_residues TTDRPPRRSLPTMYDLPSEEVGQPGLPDEYHLRQAQLLTETFRPTTHPAERIFTACDVNLYYDPLHTGYYKRPDWYAVVD VPSLYLGQDMRRSYVLWDEQVRPLVIVELLSPGTEDEDLGLRPRRPGEPPTKWEAYAQYVRVPYYVVFDGATCELRVFRP REGTFVPRRIKDERVWVREVQLSLGIWRGEYFGCRRAWLRWRDGEGNWVLTPAEQERARAEQEKARAEQEKARADLAERR AAAMAERLRALGVDPDDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30369; Mature: 30237
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTDRPPRRSLPTMYDLPSEEVGQPGLPDEYHLRQAQLLTETFRPTTHPAERIFTACDVN CCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCE LYYDPLHTGYYKRPDWYAVVDVPSLYLGQDMRRSYVLWDEQVRPLVIVELLSPGTEDEDL EEECCCCCCCCCCCCEEEEEECCHHHHCHHHHHEEEEECCCCCCEEEEEECCCCCCCCCC GLRPRRPGEPPTKWEAYAQYVRVPYYVVFDGATCELRVFRPREGTFVPRRIKDERVWVRE CCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCCCCCCCHHCCCHHHHHH VQLSLGIWRGEYFGCRRAWLRWRDGEGNWVLTPAEQERARAEQEKARAEQEKARADLAER HHHHHHECCCHHHHHHHHHHEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH RAAAMAERLRALGVDPDDL HHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TTDRPPRRSLPTMYDLPSEEVGQPGLPDEYHLRQAQLLTETFRPTTHPAERIFTACDVN CCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCE LYYDPLHTGYYKRPDWYAVVDVPSLYLGQDMRRSYVLWDEQVRPLVIVELLSPGTEDEDL EEECCCCCCCCCCCCEEEEEECCHHHHCHHHHHEEEEECCCCCCEEEEEECCCCCCCCCC GLRPRRPGEPPTKWEAYAQYVRVPYYVVFDGATCELRVFRPREGTFVPRRIKDERVWVRE CCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCCCCCCCHHCCCHHHHHH VQLSLGIWRGEYFGCRRAWLRWRDGEGNWVLTPAEQERARAEQEKARAEQEKARADLAER HHHHHHECCCHHHHHHHHHHEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH RAAAMAERLRALGVDPDDL HHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA