Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
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Accession | NC_005125 |
Length | 4,659,019 |
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The map label for this gene is coaBC [H]
Identifier: 37521117
GI number: 37521117
Start: 1668372
End: 1669580
Strand: Direct
Name: coaBC [H]
Synonym: glr1548
Alternate gene names: 37521117
Gene position: 1668372-1669580 (Clockwise)
Preceding gene: 37521116
Following gene: 37521118
Centisome position: 35.81
GC content: 66.75
Gene sequence:
>1209_bases ATGTTCGCGGGTCGGCGCGTCCTGGTGGCCGTCACCGGCGGCATCGCCGCCTACAAAGTCTGCGAGGTGGTCTCCACCCT CGCCCAGGCGGGCGCCTCCGTGCGCGTGCTGCTCACGGAGGCGGCCGAACGGTTTGTAAGCGCCCTCACCTTCGCCACCC TGGCGCGGGCGCGCGCTTACACCGACGCCGACTTTTGGTCGGCGGAGCACGGCGCGCCCCTGCACATCGCCCTGGGCCAG TGGGCCGAGGTGATCTTGATCGCACCCGTCACCGCCCACACCCTGGCGCGACTGGCCCTGGGGCTCGCCGACGACCTGCT CACCAACACGGTGCTCGCTTCGAGCGCCCCGATTTTGCTTGCCCCGGCGATGAACACCCAGATGTGGGAACAGGAGCCGG TCGCAGCGCATGCGCAGACGCTGATTACCCGGCCGCGCTACCACCTGAGCGGTCCTGGCCGGGGGCGGCTTGCCTGCGAC GCGGTGGGAGCCGGGCGCCTCAGCGAACCGGCGGTGCTTTTGCGCCACCTCGGTTCGCTTCTTTGGAGCGGCGGCAAACA GGATCTGGCGGGCAAAACCGTGCTGGTCACCGGCGGCGGCACCCGCGAGTTTCTCGACCCGGTGCGTTTTATCGGCAACC CCAGCAGCGGCCGGATGGGTATTGAGCTGGCCGCCGCCTGCGCCCACCGCGGCGGGACGGTGCACTTGGTGCTGGGTCCG ACGCACCTGGAGGCCCCCCCGGAGGTCGATTGCCACCCGGTGGTCGGCGCCGCCCAGATGGCCCAGGCCACTTTTGCGCT GTTCGAGCGGGCACATTTGACATTCATGGCCGCGGCGGTGGCCGATGTACGCCCAAGCCAAATCCACATCGACAAAATTC CCAAAAACCAGCTGGGCAATAGGCTCACCCTGGAGCCGGTCGAGGATATTTTGCTCGAACTTTCTCGCCGTAAGCAACCC TGGCAAACACTGGTCGGTTTTGCCGCCCAGACCGGCGAGGACTGGTTGGTTCCCGCGGCGGCCAAGCTCAAAGCCAAACA CCTCGATTGGCTGGTGGCCAACCGCGTCGACCTCCAAGAGCAGGGCTTCGGCGGTGACAACAATCAGGCTATGCTCTTAA GCAGCCGCGGGGATATGCATGCGATTCCCCTGATGAGCAAACTGGAGATGGCCCACCGCCTGCTGGATCGAATGGAGACT CCCGCGTGA
Upstream 100 bases:
>100_bases TCTCAGCCTCGACACGCGCCAGGACGTCAACCAGGCCCTCGAAGAAATCGACGATCTGCTGGTGGAATTCGAACGCACCT TCCCGGGCGGCTAGCGGGCG
Downstream 100 bases:
>100_bases TCCGCACACCCTGGTTCGACGAGCAAACCGGCGAGTTGGCCTTCCAGGTGGTCAGCCGCGCAGACTCCTGGCAACTGGCC CTCGCGGACGGGGTGGTTAC
Product: bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase
Products: NA
Alternate protein names: DNA/pantothenate metabolism flavoprotein; Phosphopantothenoylcysteine decarboxylase; PPCDC; CoaC; Phosphopantothenate--cysteine ligase; CoaB; PPC synthetase; PPCS; Phosphopantothenoylcysteine synthase [H]
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MFAGRRVLVAVTGGIAAYKVCEVVSTLAQAGASVRVLLTEAAERFVSALTFATLARARAYTDADFWSAEHGAPLHIALGQ WAEVILIAPVTAHTLARLALGLADDLLTNTVLASSAPILLAPAMNTQMWEQEPVAAHAQTLITRPRYHLSGPGRGRLACD AVGAGRLSEPAVLLRHLGSLLWSGGKQDLAGKTVLVTGGGTREFLDPVRFIGNPSSGRMGIELAAACAHRGGTVHLVLGP THLEAPPEVDCHPVVGAAQMAQATFALFERAHLTFMAAAVADVRPSQIHIDKIPKNQLGNRLTLEPVEDILLELSRRKQP WQTLVGFAAQTGEDWLVPAAAKLKAKHLDWLVANRVDLQEQGFGGDNNQAMLLSSRGDMHAIPLMSKLEMAHRLLDRMET PA
Sequences:
>Translated_402_residues MFAGRRVLVAVTGGIAAYKVCEVVSTLAQAGASVRVLLTEAAERFVSALTFATLARARAYTDADFWSAEHGAPLHIALGQ WAEVILIAPVTAHTLARLALGLADDLLTNTVLASSAPILLAPAMNTQMWEQEPVAAHAQTLITRPRYHLSGPGRGRLACD AVGAGRLSEPAVLLRHLGSLLWSGGKQDLAGKTVLVTGGGTREFLDPVRFIGNPSSGRMGIELAAACAHRGGTVHLVLGP THLEAPPEVDCHPVVGAAQMAQATFALFERAHLTFMAAAVADVRPSQIHIDKIPKNQLGNRLTLEPVEDILLELSRRKQP WQTLVGFAAQTGEDWLVPAAAKLKAKHLDWLVANRVDLQEQGFGGDNNQAMLLSSRGDMHAIPLMSKLEMAHRLLDRMET PA >Mature_402_residues MFAGRRVLVAVTGGIAAYKVCEVVSTLAQAGASVRVLLTEAAERFVSALTFATLARARAYTDADFWSAEHGAPLHIALGQ WAEVILIAPVTAHTLARLALGLADDLLTNTVLASSAPILLAPAMNTQMWEQEPVAAHAQTLITRPRYHLSGPGRGRLACD AVGAGRLSEPAVLLRHLGSLLWSGGKQDLAGKTVLVTGGGTREFLDPVRFIGNPSSGRMGIELAAACAHRGGTVHLVLGP THLEAPPEVDCHPVVGAAQMAQATFALFERAHLTFMAAAVADVRPSQIHIDKIPKNQLGNRLTLEPVEDILLELSRRKQP WQTLVGFAAQTGEDWLVPAAAKLKAKHLDWLVANRVDLQEQGFGGDNNQAMLLSSRGDMHAIPLMSKLEMAHRLLDRMET PA
Specific function: Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine [H]
COG id: COG0452
COG function: function code H; Phosphopantothenoylcysteine synthetase/decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PPC synthetase family [H]
Homologues:
Organism=Homo sapiens, GI71725351, Length=189, Percent_Identity=34.9206349206349, Blast_Score=90, Evalue=4e-18, Organism=Escherichia coli, GI87082301, Length=408, Percent_Identity=37.2549019607843, Blast_Score=213, Evalue=2e-56, Organism=Caenorhabditis elegans, GI17560194, Length=186, Percent_Identity=33.8709677419355, Blast_Score=93, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6322762, Length=180, Percent_Identity=30.5555555555556, Blast_Score=81, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6322925, Length=164, Percent_Identity=28.6585365853659, Blast_Score=70, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6324629, Length=138, Percent_Identity=29.7101449275362, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI24657262, Length=178, Percent_Identity=30.8988764044944, Blast_Score=81, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005252 - InterPro: IPR007085 - InterPro: IPR003382 [H]
Pfam domain/function: PF04127 DFP; PF02441 Flavoprotein [H]
EC number: =4.1.1.36; =6.3.2.5 [H]
Molecular weight: Translated: 42979; Mature: 42979
Theoretical pI: Translated: 7.48; Mature: 7.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAGRRVLVAVTGGIAAYKVCEVVSTLAQAGASVRVLLTEAAERFVSALTFATLARARAY CCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHC TDADFWSAEHGAPLHIALGQWAEVILIAPVTAHTLARLALGLADDLLTNTVLASSAPILL CCCHHCCCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE APAMNTQMWEQEPVAAHAQTLITRPRYHLSGPGRGRLACDAVGAGRLSEPAVLLRHLGSL EECCCCHHHCCCCHHHHHHHHHCCCCEEECCCCCCCEEEECCCCCCCCCHHHHHHHHHHH LWSGGKQDLAGKTVLVTGGGTREFLDPVRFIGNPSSGRMGIELAAACAHRGGTVHLVLGP HHCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEECC THLEAPPEVDCHPVVGAAQMAQATFALFERAHLTFMAAAVADVRPSQIHIDKIPKNQLGN CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHCCC RLTLEPVEDILLELSRRKQPWQTLVGFAAQTGEDWLVPAAAKLKAKHLDWLVANRVDLQE EEEECHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHH QGFGGDNNQAMLLSSRGDMHAIPLMSKLEMAHRLLDRMETPA CCCCCCCCCEEEEECCCCEEHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MFAGRRVLVAVTGGIAAYKVCEVVSTLAQAGASVRVLLTEAAERFVSALTFATLARARAY CCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHC TDADFWSAEHGAPLHIALGQWAEVILIAPVTAHTLARLALGLADDLLTNTVLASSAPILL CCCHHCCCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE APAMNTQMWEQEPVAAHAQTLITRPRYHLSGPGRGRLACDAVGAGRLSEPAVLLRHLGSL EECCCCHHHCCCCHHHHHHHHHCCCCEEECCCCCCCEEEECCCCCCCCCHHHHHHHHHHH LWSGGKQDLAGKTVLVTGGGTREFLDPVRFIGNPSSGRMGIELAAACAHRGGTVHLVLGP HHCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEECC THLEAPPEVDCHPVVGAAQMAQATFALFERAHLTFMAAAVADVRPSQIHIDKIPKNQLGN CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHCCC RLTLEPVEDILLELSRRKQPWQTLVGFAAQTGEDWLVPAAAKLKAKHLDWLVANRVDLQE EEEECHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHH QGFGGDNNQAMLLSSRGDMHAIPLMSKLEMAHRLLDRMETPA CCCCCCCCCEEEEECCCCEEHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]