Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
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Accession | NC_005125 |
Length | 4,659,019 |
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The map label for this gene is 37520395
Identifier: 37520395
GI number: 37520395
Start: 884544
End: 885767
Strand: Reverse
Name: 37520395
Synonym: gll0826
Alternate gene names: NA
Gene position: 885767-884544 (Counterclockwise)
Preceding gene: 37520401
Following gene: 37520394
Centisome position: 19.01
GC content: 66.26
Gene sequence:
>1224_bases ATGGCCGGTTTTGCCTCAGACACGATGCACTGGGCCGGTGCCCTTTCGCGCCGCCCCACCGTGGCAGAGGCCCTCACAGA AGCCACCCGGGCGATCCGCTCCCAGATGGCCGGTCGGCGGGTGGATCTGCTGTTTGTGTTCGCCTCCCCGGATTTTGCCC AGGGTGCCGGGCAGTGGCTGGGGGGACTGCAGCGCGAACTGGCCTGCCGGGTGCAGATAGGCTGCTCCGGCGGCGGCATC ATCGGTGCGGGCAGTGAGGTCGAAGGGCCTTCGGCGCTGTCGCTGCTGGCGGCGCACCTGCCGGGGGTCGAGTTGCGACC CTTCTGGCTCAAAGCCGAGGAGCTTCCCGATCTCGATAGCTCTCCCAAGACCTGGGAGAATCTGATGGAAATCTCTGCCG GGGCGGCTCCCCATTTTGTGCTGATGGTCGACGGCAGCAGTTTTCCGGTCGACGTGCTCATCGGTGGCCTCGATTTTGCT TTTCCGAAGGCCATCAAGGTGGGGGGCCTGGCGAGCGGCGGCAACCGCCCCGGCCAGAACCGCCTGTTTTTTGGCGATCA GGCGGTGGGCAGCGGCGCGGTGGGGGTGGTCCTCGCAGGCGACATCGCCGTCGAAGCGGCGGTGGCCCAGGGTTGTCGCC CGGTGGGGGAGACCTTTCAGATCACCCGCGCCGAGGGCAACCTGCTATGGGAACTGGACGGCCAACCGGCGTTGCAGGTG TTGCAAACCGTCCTGCAGCAACTCGACGAGAACGATCAGCGTCTGGCGCGCAATGCGTTGTTTGTCGGCGTGCGGATGAG CGAGTTTCACTCGGGTTCCGAGCAGGGCGATTTTCTGGTGCGCAATTTGATGGGTGTCGATTCGCGCACGGGCGGGTTGG CGGTGGGCGAATGGCTGCGCACCGGCCAGACCGTCCGCTTTCACCTGCGCGACGCGGCCACCTCCCGAGACGATCTGCAG CTGGTACTGCAGCGCCACCGTCTTGAGCACAGCGGCGCGCCGCCCGCCGGGGCCTTGCTCTTTTCGTGCCTCGGGCGGGG TGAATCTCTCTATGGCGAACCGGACGTCGACAGTACCCTGTTCGCCCAGGTCCTGGGTGAGGGGGTGCCGCTTGCCGGAT TTTTCTGTAATGGCGAGATCGGACCGGTGGGAAGCACCACCTTTCTGCACGGCTACACCTCCTCCTTCGGCCTCTTCCGG CCCCGCACCTCCGGGCGGCTTTGA
Upstream 100 bases:
>100_bases CTCGGCGGCGGAGAGGATCTCGACAGGCTCGCGACTCATTGGGACATACTATCTTGGGGACAGACCTTCTGGCGTTCGTC ACAACAAGGAGGCATTGAGC
Downstream 100 bases:
>100_bases CAGCCCGTCCACTGCTTTGCCATAATAGTTAGCTGTTGTGATTTCGCTCGAACCAGGTTACCCAAGCGCGCGCCGCGCGC ACCTGTACGGCGGTAGGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MAGFASDTMHWAGALSRRPTVAEALTEATRAIRSQMAGRRVDLLFVFASPDFAQGAGQWLGGLQRELACRVQIGCSGGGI IGAGSEVEGPSALSLLAAHLPGVELRPFWLKAEELPDLDSSPKTWENLMEISAGAAPHFVLMVDGSSFPVDVLIGGLDFA FPKAIKVGGLASGGNRPGQNRLFFGDQAVGSGAVGVVLAGDIAVEAAVAQGCRPVGETFQITRAEGNLLWELDGQPALQV LQTVLQQLDENDQRLARNALFVGVRMSEFHSGSEQGDFLVRNLMGVDSRTGGLAVGEWLRTGQTVRFHLRDAATSRDDLQ LVLQRHRLEHSGAPPAGALLFSCLGRGESLYGEPDVDSTLFAQVLGEGVPLAGFFCNGEIGPVGSTTFLHGYTSSFGLFR PRTSGRL
Sequences:
>Translated_407_residues MAGFASDTMHWAGALSRRPTVAEALTEATRAIRSQMAGRRVDLLFVFASPDFAQGAGQWLGGLQRELACRVQIGCSGGGI IGAGSEVEGPSALSLLAAHLPGVELRPFWLKAEELPDLDSSPKTWENLMEISAGAAPHFVLMVDGSSFPVDVLIGGLDFA FPKAIKVGGLASGGNRPGQNRLFFGDQAVGSGAVGVVLAGDIAVEAAVAQGCRPVGETFQITRAEGNLLWELDGQPALQV LQTVLQQLDENDQRLARNALFVGVRMSEFHSGSEQGDFLVRNLMGVDSRTGGLAVGEWLRTGQTVRFHLRDAATSRDDLQ LVLQRHRLEHSGAPPAGALLFSCLGRGESLYGEPDVDSTLFAQVLGEGVPLAGFFCNGEIGPVGSTTFLHGYTSSFGLFR PRTSGRL >Mature_406_residues AGFASDTMHWAGALSRRPTVAEALTEATRAIRSQMAGRRVDLLFVFASPDFAQGAGQWLGGLQRELACRVQIGCSGGGII GAGSEVEGPSALSLLAAHLPGVELRPFWLKAEELPDLDSSPKTWENLMEISAGAAPHFVLMVDGSSFPVDVLIGGLDFAF PKAIKVGGLASGGNRPGQNRLFFGDQAVGSGAVGVVLAGDIAVEAAVAQGCRPVGETFQITRAEGNLLWELDGQPALQVL QTVLQQLDENDQRLARNALFVGVRMSEFHSGSEQGDFLVRNLMGVDSRTGGLAVGEWLRTGQTVRFHLRDAATSRDDLQL VLQRHRLEHSGAPPAGALLFSCLGRGESLYGEPDVDSTLFAQVLGEGVPLAGFFCNGEIGPVGSTTFLHGYTSSFGLFRP RTSGRL
Specific function: Unknown
COG id: COG4398
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv0874c [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019494 - InterPro: IPR013702 - InterPro: IPR016741 [H]
Pfam domain/function: PF08495 FIST; PF10442 FIST_C [H]
EC number: NA
Molecular weight: Translated: 43070; Mature: 42939
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGFASDTMHWAGALSRRPTVAEALTEATRAIRSQMAGRRVDLLFVFASPDFAQGAGQWL CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHH GGLQRELACRVQIGCSGGGIIGAGSEVEGPSALSLLAAHLPGVELRPFWLKAEELPDLDS HHHHHHEEEEEEEECCCCCEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEEHHHCCCCCC SPKTWENLMEISAGAAPHFVLMVDGSSFPVDVLIGGLDFAFPKAIKVGGLASGGNRPGQN CCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHEEECCCHHCCCHHEECCCCCCCCCCCCC RLFFGDQAVGSGAVGVVLAGDIAVEAAVAQGCRPVGETFQITRAEGNLLWELDGQPALQV CEEECCCCCCCCCEEEEEECHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEECCCHHHHH LQTVLQQLDENDQRLARNALFVGVRMSEFHSGSEQGDFLVRNLMGVDSRTGGLAVGEWLR HHHHHHHHCCCHHHHHHHHHEEEEEHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHH TGQTVRFHLRDAATSRDDLQLVLQRHRLEHSGAPPAGALLFSCLGRGESLYGEPDVDSTL CCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHH FAQVLGEGVPLAGFFCNGEIGPVGSTTFLHGYTSSFGLFRPRTSGRL HHHHHCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure AGFASDTMHWAGALSRRPTVAEALTEATRAIRSQMAGRRVDLLFVFASPDFAQGAGQWL CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHH GGLQRELACRVQIGCSGGGIIGAGSEVEGPSALSLLAAHLPGVELRPFWLKAEELPDLDS HHHHHHEEEEEEEECCCCCEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEEHHHCCCCCC SPKTWENLMEISAGAAPHFVLMVDGSSFPVDVLIGGLDFAFPKAIKVGGLASGGNRPGQN CCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHEEECCCHHCCCHHEECCCCCCCCCCCCC RLFFGDQAVGSGAVGVVLAGDIAVEAAVAQGCRPVGETFQITRAEGNLLWELDGQPALQV CEEECCCCCCCCCEEEEEECHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEECCCHHHHH LQTVLQQLDENDQRLARNALFVGVRMSEFHSGSEQGDFLVRNLMGVDSRTGGLAVGEWLR HHHHHHHHCCCHHHHHHHHHEEEEEHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHH TGQTVRFHLRDAATSRDDLQLVLQRHRLEHSGAPPAGALLFSCLGRGESLYGEPDVDSTL CCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHH FAQVLGEGVPLAGFFCNGEIGPVGSTTFLHGYTSSFGLFRPRTSGRL HHHHHCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]