| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is ppx [H]
Identifier: 37520079
GI number: 37520079
Start: 548143
End: 549807
Strand: Reverse
Name: ppx [H]
Synonym: gvip052
Alternate gene names: 37520079
Gene position: 549807-548143 (Counterclockwise)
Preceding gene: 37520080
Following gene: 37520078
Centisome position: 11.8
GC content: 64.5
Gene sequence:
>1665_bases ATGCCCGAACCCGCGGCTGACGCAGAGAAGACCCTGGCTGCCATCGACATCGGCACCAACTCCATCCACATGGTGGTGGT TCATATCCAGCCCCGGCTGGCCAGCTACACGATCGTCGCCCGCGAGAAGCAGATGGTGCGCCTGGGTGAGTACTGCCAGA AGACCGGCTGGCTGACGCCGGAGGCGATGGTGCGCGCCCTCGACGCGCTGCGTCACTGCAAAGCCTTTGCTGAGGGCCTG GGAGCGCAGGAAATGATCGCCGTCGCCACCAGTGCCGTGCGCGAGGCACCGAACGGGCCGGAATTCTTGCTGCAGATCCA GCGGGTGGTCGGGCTCAAAGTCGACTTGATTTCGGGGGAGGAGGAGGCGCGGCGCATCTACCTCGGGGTGCTCTCCGCCA TCGAGTTCGACAACCGTACCCACGCCGTCATCGACATCGGCGGCGGTTCGACGGAGCTAATTCTGGGCGACGGCCGCGAG CCGCGCTATCTGGCGAGCGTCAAGGCGGGGGCGGTGCGCCTCAGCGAACAGTTCGTGCAGAGCGACCCGATCTCGGGCCG CGACTACGGCCGCCTGCGCAACCAGGTGCGCAATTTGATCGAGCCTGCCGTGGACAAACTGCTGGCCCTAGGGCCGTTCG AGCGCTTGGTCGGCACCTCCGGGACGATCATGACCTTAGCTGAGATCGATGCGCGCCGGGGGGGCAGCTTTCCTACCTCG CTGCAGGGCTACGAGTTGACGCTTGCCAGTCTTGAGCAGATCGCAGCGCAGTTGCGCGAACTCGATCTCGAAGCGCGCCG CCGTCTACCCGGAGTCTCCGAGCGCCGCGCCGACATCATCGTCGCCGGGGCGACCATTCTGCTCGAAGCGATGCAGATGC TGGGGGTGGGCTCGATCACCGTCTGTGAGGCGGCGTTGCGCGAGGGGCTCATCGTCGACTGGATGATCGGCCGGGGACTG ATTGCCGATCGGTTGCGCTACCAGGGTTCGGTGCGCGAGCGCAGTGTGCTGCAGCTGGCCGACAAATTCAACCTCGACAC CACCCACGCCGAGCAGGTGACGCGTCTGTCCTTAAGCCTTTTTGATCAGTCCCGGGGCCGGTTGCACCGCTGGAGCGACG CCGATCGCGAGCTACTGTGGGCGGCGGCGATGTTGCACAACTGCGGCCACTTCATCAACCATTCCAGTCACCACAAGCAT TCGTACTACCTGATCCGCCACGGCGGCATGCTCGGTTTTACCGAAGAAGAGATCGAGGTGATCGCCAACGTCGCCCGCTA CCACCGCAAGAGCACCCCCAAAAGCAAGCACCGCGAATTCCAGCACCTTGTCAAAGAACACAAGCGCCTGGTGCGCCAGA TGAGCGTGTTTTTGCGGCTCGCCTCCGCCCTCGATCGCCGCCACAAAGGGGCCGTACGGGGCGTCCGGCTCGCCTTTGCT CCTGGAGAAGTCGAGCTTTTTGTCCAACCGCACGACCCGGCCGACCCGTGCGAGATGGAGCTGTGGAACGCCGAATTCAA AAAAGCCGAGTTCGAACAGGAGTTCGGCCGCACCCTGGCCATTGCCCTGGAGTCGGCTGTGGCCGAACCGCTCGCGGTCC TGGGCGCCAAGGCCGAAACGCAACCCGACGCGGTGAGAGTGCCGCAGGGTAGTTGGGTATCCTAA
Upstream 100 bases:
>100_bases CCGCCTGTGCGGGGTTTTTTGCAGGTGGGTGCGCGGCGATTCCGCCGCGTTGGGGTGTATCTTCTCCGTTACAATTGGAG CAAACTTTGCATGAAACCCC
Downstream 100 bases:
>100_bases GACCACGTTCGCCCCGGACTGCAGCGCAATGGACCGCAAGCTGGAACCAGCAACCGACGCGTGGCCCCTACCGCCTTTGA CCCGCGGTACTCTCCTGGAC
Product: exopolyphosphatase
Products: NA
Alternate protein names: ExopolyPase; Metaphosphatase [H]
Number of amino acids: Translated: 554; Mature: 553
Protein sequence:
>554_residues MPEPAADAEKTLAAIDIGTNSIHMVVVHIQPRLASYTIVAREKQMVRLGEYCQKTGWLTPEAMVRALDALRHCKAFAEGL GAQEMIAVATSAVREAPNGPEFLLQIQRVVGLKVDLISGEEEARRIYLGVLSAIEFDNRTHAVIDIGGGSTELILGDGRE PRYLASVKAGAVRLSEQFVQSDPISGRDYGRLRNQVRNLIEPAVDKLLALGPFERLVGTSGTIMTLAEIDARRGGSFPTS LQGYELTLASLEQIAAQLRELDLEARRRLPGVSERRADIIVAGATILLEAMQMLGVGSITVCEAALREGLIVDWMIGRGL IADRLRYQGSVRERSVLQLADKFNLDTTHAEQVTRLSLSLFDQSRGRLHRWSDADRELLWAAAMLHNCGHFINHSSHHKH SYYLIRHGGMLGFTEEEIEVIANVARYHRKSTPKSKHREFQHLVKEHKRLVRQMSVFLRLASALDRRHKGAVRGVRLAFA PGEVELFVQPHDPADPCEMELWNAEFKKAEFEQEFGRTLAIALESAVAEPLAVLGAKAETQPDAVRVPQGSWVS
Sequences:
>Translated_554_residues MPEPAADAEKTLAAIDIGTNSIHMVVVHIQPRLASYTIVAREKQMVRLGEYCQKTGWLTPEAMVRALDALRHCKAFAEGL GAQEMIAVATSAVREAPNGPEFLLQIQRVVGLKVDLISGEEEARRIYLGVLSAIEFDNRTHAVIDIGGGSTELILGDGRE PRYLASVKAGAVRLSEQFVQSDPISGRDYGRLRNQVRNLIEPAVDKLLALGPFERLVGTSGTIMTLAEIDARRGGSFPTS LQGYELTLASLEQIAAQLRELDLEARRRLPGVSERRADIIVAGATILLEAMQMLGVGSITVCEAALREGLIVDWMIGRGL IADRLRYQGSVRERSVLQLADKFNLDTTHAEQVTRLSLSLFDQSRGRLHRWSDADRELLWAAAMLHNCGHFINHSSHHKH SYYLIRHGGMLGFTEEEIEVIANVARYHRKSTPKSKHREFQHLVKEHKRLVRQMSVFLRLASALDRRHKGAVRGVRLAFA PGEVELFVQPHDPADPCEMELWNAEFKKAEFEQEFGRTLAIALESAVAEPLAVLGAKAETQPDAVRVPQGSWVS >Mature_553_residues PEPAADAEKTLAAIDIGTNSIHMVVVHIQPRLASYTIVAREKQMVRLGEYCQKTGWLTPEAMVRALDALRHCKAFAEGLG AQEMIAVATSAVREAPNGPEFLLQIQRVVGLKVDLISGEEEARRIYLGVLSAIEFDNRTHAVIDIGGGSTELILGDGREP RYLASVKAGAVRLSEQFVQSDPISGRDYGRLRNQVRNLIEPAVDKLLALGPFERLVGTSGTIMTLAEIDARRGGSFPTSL QGYELTLASLEQIAAQLRELDLEARRRLPGVSERRADIIVAGATILLEAMQMLGVGSITVCEAALREGLIVDWMIGRGLI ADRLRYQGSVRERSVLQLADKFNLDTTHAEQVTRLSLSLFDQSRGRLHRWSDADRELLWAAAMLHNCGHFINHSSHHKHS YYLIRHGGMLGFTEEEIEVIANVARYHRKSTPKSKHREFQHLVKEHKRLVRQMSVFLRLASALDRRHKGAVRGVRLAFAP GEVELFVQPHDPADPCEMELWNAEFKKAEFEQEFGRTLAIALESAVAEPLAVLGAKAETQPDAVRVPQGSWVS
Specific function: Degradation of inorganic polyphosphates. Orthophosphate is released progressively from the ends of polyphosphate of circa 500 residues long, while chains of circa 15 residues compete poorly with polyphosphate as substrate [H]
COG id: COG0248
COG function: function code FP; Exopolyphosphatase
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gppA/ppx family [H]
Homologues:
Organism=Escherichia coli, GI1788848, Length=423, Percent_Identity=30.4964539007092, Blast_Score=189, Evalue=6e-49, Organism=Escherichia coli, GI48994966, Length=464, Percent_Identity=29.0948275862069, Blast_Score=162, Evalue=6e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022371 - InterPro: IPR003695 [H]
Pfam domain/function: PF02541 Ppx-GppA [H]
EC number: =3.6.1.11 [H]
Molecular weight: Translated: 61476; Mature: 61345
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEPAADAEKTLAAIDIGTNSIHMVVVHIQPRLASYTIVAREKQMVRLGEYCQKTGWLTP CCCCCCCHHHHEEEEEECCCCEEEEEEEECCCCHHEEEEHHHHHHHHHHHHHHHCCCCCH EAMVRALDALRHCKAFAEGLGAQEMIAVATSAVREAPNGPEFLLQIQRVVGLKVDLISGE HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEECCH EEARRIYLGVLSAIEFDNRTHAVIDIGGGSTELILGDGREPRYLASVKAGAVRLSEQFVQ HHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHH SDPISGRDYGRLRNQVRNLIEPAVDKLLALGPFERLVGTSGTIMTLAEIDARRGGSFPTS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEHHHHHHHCCCCCCCC LQGYELTLASLEQIAAQLRELDLEARRRLPGVSERRADIIVAGATILLEAMQMLGVGSIT CCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCHH VCEAALREGLIVDWMIGRGLIADRLRYQGSVRERSVLQLADKFNLDTTHAEQVTRLSLSL HHHHHHHCCCEEEEHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH FDQSRGRLHRWSDADRELLWAAAMLHNCGHFINHSSHHKHSYYLIRHGGMLGFTEEEIEV HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHH IANVARYHRKSTPKSKHREFQHLVKEHKRLVRQMSVFLRLASALDRRHKGAVRGVRLAFA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC PGEVELFVQPHDPADPCEMELWNAEFKKAEFEQEFGRTLAIALESAVAEPLAVLGAKAET CCCEEEEECCCCCCCCCHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCC QPDAVRVPQGSWVS CCCCEECCCCCCCC >Mature Secondary Structure PEPAADAEKTLAAIDIGTNSIHMVVVHIQPRLASYTIVAREKQMVRLGEYCQKTGWLTP CCCCCCHHHHEEEEEECCCCEEEEEEEECCCCHHEEEEHHHHHHHHHHHHHHHCCCCCH EAMVRALDALRHCKAFAEGLGAQEMIAVATSAVREAPNGPEFLLQIQRVVGLKVDLISGE HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEECCH EEARRIYLGVLSAIEFDNRTHAVIDIGGGSTELILGDGREPRYLASVKAGAVRLSEQFVQ HHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHH SDPISGRDYGRLRNQVRNLIEPAVDKLLALGPFERLVGTSGTIMTLAEIDARRGGSFPTS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEHHHHHHHCCCCCCCC LQGYELTLASLEQIAAQLRELDLEARRRLPGVSERRADIIVAGATILLEAMQMLGVGSIT CCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCHH VCEAALREGLIVDWMIGRGLIADRLRYQGSVRERSVLQLADKFNLDTTHAEQVTRLSLSL HHHHHHHCCCEEEEHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH FDQSRGRLHRWSDADRELLWAAAMLHNCGHFINHSSHHKHSYYLIRHGGMLGFTEEEIEV HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHH IANVARYHRKSTPKSKHREFQHLVKEHKRLVRQMSVFLRLASALDRRHKGAVRGVRLAFA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC PGEVELFVQPHDPADPCEMELWNAEFKKAEFEQEFGRTLAIALESAVAEPLAVLGAKAET CCCEEEEECCCCCCCCCHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCC QPDAVRVPQGSWVS CCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]