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The map label for this gene is ylmH [H]

Identifier: 37519960

GI number: 37519960

Start: 411984

End: 412772

Strand: Reverse

Name: ylmH [H]

Synonym: gll0391

Alternate gene names: 37519960

Gene position: 412772-411984 (Counterclockwise)

Preceding gene: 37519963

Following gene: 37519958

Centisome position: 8.86

GC content: 63.5

Gene sequence:

>789_bases
ATGCCCAGCACTTTGCCCCGCGAAGAATTGCTCAAGCGCGCCGAGCATCGCGACGCGCTCGCGCGCGTGCTCGATCTGGC
CGAGACGGCCCTGCGCGACTGGTCGGTGGTCACCTCCGACTTTTACTCGCCTCCCGAAGTGGGCGAATGTCTCGATGTCT
TTTCGCGTCTGGTGGAGGTGCACGCCGCCGCCTGGGGCGGCTATTCCCAGGCCGAGCGCCAACGTATCGCGGTTTCCCGC
GATAACATTGCCATCGAAACCGCCGCCATTCCGTTGGCTGCCGTCGATATTCGCGGTAACTTTTTGTTCGACGCCGCAAG
CCATCGTGATTTTCTGGGGGCCATCCTGGGCACCGGCATCGTGCGTGGCAAGGTGGGGGACATTCTGGTGCTGGGGGATC
GCGGCGCCCAGACGCTGGTGGCCCCTGAACTGGTGCCGTTTTTGCAGACTAGCCTCACCAGCGTGCGCACGGTGCCGGTG
CAGGTGGTGCCGATTGGCTTTGAGGAACTACGCATCCGGCCGCCCCAGACCAAGGAAATCACCTCGGTCGAAGCGTCGCT
GCGCATCGACGCCATCGGTTCGGCCGGGTTTGGTTTATCCCGCAACAAGATGGTCGAATCGATCGAAGCGGGGGAGGTGA
CCCTCAACTGGAAGACCGTCACCCAGCCCAGCAAGAACGTCCAGACCGGCGACCGCATCACCCTGCGCGGGCGGGGCCGC
CTGGAGGTGGGACCGGTGGATACGACCAAAAAAGGACGCTACCGCGTCCAGATGATCCGCTATCAGTAA

Upstream 100 bases:

>100_bases
CTCGATGTTAGGCCATGGCGACTTGCTTGAAAGTGTTGAGAGTGTGTTGAGTGCTTGCAATCAACCGTCTTCCCCCAGCA
CCTACTCTAAAATCAAGGGC

Downstream 100 bases:

>100_bases
AGTCTCACTTGGATTCTTCGATCACCGCCATCACCACGGTGGCGGCAGCGATGTTAAGGATCCCGGCGATTTTGACGCCT
TTGTACAGAGGCGGTACCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MPSTLPREELLKRAEHRDALARVLDLAETALRDWSVVTSDFYSPPEVGECLDVFSRLVEVHAAAWGGYSQAERQRIAVSR
DNIAIETAAIPLAAVDIRGNFLFDAASHRDFLGAILGTGIVRGKVGDILVLGDRGAQTLVAPELVPFLQTSLTSVRTVPV
QVVPIGFEELRIRPPQTKEITSVEASLRIDAIGSAGFGLSRNKMVESIEAGEVTLNWKTVTQPSKNVQTGDRITLRGRGR
LEVGPVDTTKKGRYRVQMIRYQ

Sequences:

>Translated_262_residues
MPSTLPREELLKRAEHRDALARVLDLAETALRDWSVVTSDFYSPPEVGECLDVFSRLVEVHAAAWGGYSQAERQRIAVSR
DNIAIETAAIPLAAVDIRGNFLFDAASHRDFLGAILGTGIVRGKVGDILVLGDRGAQTLVAPELVPFLQTSLTSVRTVPV
QVVPIGFEELRIRPPQTKEITSVEASLRIDAIGSAGFGLSRNKMVESIEAGEVTLNWKTVTQPSKNVQTGDRITLRGRGR
LEVGPVDTTKKGRYRVQMIRYQ
>Mature_261_residues
PSTLPREELLKRAEHRDALARVLDLAETALRDWSVVTSDFYSPPEVGECLDVFSRLVEVHAAAWGGYSQAERQRIAVSRD
NIAIETAAIPLAAVDIRGNFLFDAASHRDFLGAILGTGIVRGKVGDILVLGDRGAQTLVAPELVPFLQTSLTSVRTVPVQ
VVPIGFEELRIRPPQTKEITSVEASLRIDAIGSAGFGLSRNKMVESIEAGEVTLNWKTVTQPSKNVQTGDRITLRGRGRL
EVGPVDTTKKGRYRVQMIRYQ

Specific function: Unknown

COG id: COG2302

COG function: function code S; Uncharacterized conserved protein, contains S4-like domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002942 [H]

Pfam domain/function: PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 28728; Mature: 28597

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSTLPREELLKRAEHRDALARVLDLAETALRDWSVVTSDFYSPPEVGECLDVFSRLVEV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
HAAAWGGYSQAERQRIAVSRDNIAIETAAIPLAAVDIRGNFLFDAASHRDFLGAILGTGI
HHHHCCCCCHHHHHHEEEECCCEEEEEECCEEEEEEECCCEEEECCCCHHHHHHHHHCCC
VRGKVGDILVLGDRGAQTLVAPELVPFLQTSLTSVRTVPVQVVPIGFEELRIRPPQTKEI
EECCCCCEEEECCCCCCEEHHHHHHHHHHHHHHHHEECEEEEEECCHHHEEECCCCCCHH
TSVEASLRIDAIGSAGFGLSRNKMVESIEAGEVTLNWKTVTQPSKNVQTGDRITLRGRGR
HHEEEEEEEEEECCCCCCCCHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCEEEEECCCE
LEVGPVDTTKKGRYRVQMIRYQ
EEECCCCCCCCCCEEEEEEEEC
>Mature Secondary Structure 
PSTLPREELLKRAEHRDALARVLDLAETALRDWSVVTSDFYSPPEVGECLDVFSRLVEV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
HAAAWGGYSQAERQRIAVSRDNIAIETAAIPLAAVDIRGNFLFDAASHRDFLGAILGTGI
HHHHCCCCCHHHHHHEEEECCCEEEEEECCEEEEEEECCCEEEECCCCHHHHHHHHHCCC
VRGKVGDILVLGDRGAQTLVAPELVPFLQTSLTSVRTVPVQVVPIGFEELRIRPPQTKEI
EECCCCCEEEECCCCCCEEHHHHHHHHHHHHHHHHEECEEEEEECCHHHEEECCCCCCHH
TSVEASLRIDAIGSAGFGLSRNKMVESIEAGEVTLNWKTVTQPSKNVQTGDRITLRGRGR
HHEEEEEEEEEECCCCCCCCHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCEEEEECCCE
LEVGPVDTTKKGRYRVQMIRYQ
EEECCCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9045828; 9384377 [H]