Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
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Accession | NC_005085 |
Length | 4,751,080 |
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The map label for this gene is 34498662
Identifier: 34498662
GI number: 34498662
Start: 3489545
End: 3490102
Strand: Direct
Name: 34498662
Synonym: CV_3207
Alternate gene names: NA
Gene position: 3489545-3490102 (Clockwise)
Preceding gene: 34498661
Following gene: 34498664
Centisome position: 73.45
GC content: 61.11
Gene sequence:
>558_bases ATGTCCGACAAGCACGAAACCGTGATCGCCGCCACCCGCGAATGGGTTGAGAAAGCGGTGATCGGCCTGAATCTGTGCCC GTTCGCCAAATCCGTGTACGTGAAGAACCAGGTGCGCATCCAGGTGAGCGAAGCCGCCAATCCGCAACAGCTTGCCCAAG AGCTGGCCGCGGAGCTGAAACTGCTGGCCGACACCGATCCTCAGGAAATCGACACCACGCTGCTGGTACATCCCGACACG CTGGGCCGATTCCTGGATTTCAACGAATTCCTGGACATCGCCGACGCCATCGTCGACGACCTGGAACTAGACGGCGTGAT CCAGGTGGCGAGCTTCCATCCCAAATTCCAGTTCGAAGGCACCGGCGTCAACGACATCGACAACTACACCAACCGCTCGC CCTACCCGACGCTGCACCTGATCCGCGAAGCCAGCATAGACCGCGCGGTGGAGGCCTTCCCGGAGGCCGAGGCCATCTAC GAGCGCAATATCGAAACCCTGCAGAAGCTGGGTCTGGCCGGCTGGAAGGCGCTGTTCGCGCCCAAGCCGTCCGAATAA
Upstream 100 bases:
>100_bases TCTTTCGAGAGATCATCTGGCAGTGATGACAAAACCCGGACCTGTCCGGGTTTTTTGCATTCTGATCGAGCCGATCCGCG CCAGCCCTACAGGAGCCTGC
Downstream 100 bases:
>100_bases GGCTCTCCGAAACACAAAAAGCGCAGCTCCATGGCTGCGCTTTGTCGTTTGCCTCTCCTCAACGCGGATAGCGGCCCTGC TTGTCCGCATAGAAGGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MSDKHETVIAATREWVEKAVIGLNLCPFAKSVYVKNQVRIQVSEAANPQQLAQELAAELKLLADTDPQEIDTTLLVHPDT LGRFLDFNEFLDIADAIVDDLELDGVIQVASFHPKFQFEGTGVNDIDNYTNRSPYPTLHLIREASIDRAVEAFPEAEAIY ERNIETLQKLGLAGWKALFAPKPSE
Sequences:
>Translated_185_residues MSDKHETVIAATREWVEKAVIGLNLCPFAKSVYVKNQVRIQVSEAANPQQLAQELAAELKLLADTDPQEIDTTLLVHPDT LGRFLDFNEFLDIADAIVDDLELDGVIQVASFHPKFQFEGTGVNDIDNYTNRSPYPTLHLIREASIDRAVEAFPEAEAIY ERNIETLQKLGLAGWKALFAPKPSE >Mature_184_residues SDKHETVIAATREWVEKAVIGLNLCPFAKSVYVKNQVRIQVSEAANPQQLAQELAAELKLLADTDPQEIDTTLLVHPDTL GRFLDFNEFLDIADAIVDDLELDGVIQVASFHPKFQFEGTGVNDIDNYTNRSPYPTLHLIREASIDRAVEAFPEAEAIYE RNIETLQKLGLAGWKALFAPKPSE
Specific function: Unknown
COG id: COG3310
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20663; Mature: 20532
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKHETVIAATREWVEKAVIGLNLCPFAKSVYVKNQVRIQVSEAANPQQLAQELAAELK CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHEECCEEEEEECCCCCHHHHHHHHHHHHH LLADTDPQEIDTTLLVHPDTLGRFLDFNEFLDIADAIVDDLELDGVIQVASFHPKFQFEG HHCCCCHHHHCEEEEECCHHHHHHHCHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEECC TGVNDIDNYTNRSPYPTLHLIREASIDRAVEAFPEAEAIYERNIETLQKLGLAGWKALFA CCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHCHHHHHHHCC PKPSE CCCCC >Mature Secondary Structure SDKHETVIAATREWVEKAVIGLNLCPFAKSVYVKNQVRIQVSEAANPQQLAQELAAELK CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHEECCEEEEEECCCCCHHHHHHHHHHHHH LLADTDPQEIDTTLLVHPDTLGRFLDFNEFLDIADAIVDDLELDGVIQVASFHPKFQFEG HHCCCCHHHHCEEEEECCHHHHHHHCHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEECC TGVNDIDNYTNRSPYPTLHLIREASIDRAVEAFPEAEAIYERNIETLQKLGLAGWKALFA CCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHCHHHHHHHCC PKPSE CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA