| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498316
Identifier: 34498316
GI number: 34498316
Start: 3119143
End: 3119541
Strand: Reverse
Name: 34498316
Synonym: CV_2861
Alternate gene names: NA
Gene position: 3119541-3119143 (Counterclockwise)
Preceding gene: 34498318
Following gene: 34498314
Centisome position: 65.66
GC content: 62.66
Gene sequence:
>399_bases ATGACGAATCGCAGCAATCTGGACATCGTCCGCGCCACTTACGAAGGCAAGTCCGAAGACAATGGCCGCAATCTGCTGGC GGCGCTGGCGCCAGATGCGGAATGGACCGAGGCGGCCGGCTTCCCGTACGCCGGCACTTATGTCGGCCCGCAGGCCATCG TGGAAAACGTGTTCCAGCGGCTGGGCAGCGAGTGGGACGGCTACCGCGCGGCGGTGGACCGGTATTTCGTCGATGGCGAC AATGTGGTCGCCCAGGGCTTTTACCACGGCACTTACCGCGCCACCGGCAAGAGCTTCACCGCGTCCTTCGCTCATGTCTA TACGCTGAAGGACGGCAAGATCGTCAAGTTCGAGCAGATTGTGGACAGCGCCAAGGTGTGGGAGGCGATGCGTGCCTGA
Upstream 100 bases:
>100_bases GATAGTTGCCTTTTGGTGCGTATGGTGGTGAAAGGGCCGGCTTGAATTATCCGGGTAAGGCCATATTTGAGAACGATTCC TGTTTAAGAAGGCAAGCATC
Downstream 100 bases:
>100_bases TCGCGTCGCGCGATGAAAAACGGCCAGCTCCGAAGGGAGGCTGGCCGTTTTGTTTTGTCCAGGAGGGTCAGACCGGCTGC AGTTGCTCGCCGACGCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MTNRSNLDIVRATYEGKSEDNGRNLLAALAPDAEWTEAAGFPYAGTYVGPQAIVENVFQRLGSEWDGYRAAVDRYFVDGD NVVAQGFYHGTYRATGKSFTASFAHVYTLKDGKIVKFEQIVDSAKVWEAMRA
Sequences:
>Translated_132_residues MTNRSNLDIVRATYEGKSEDNGRNLLAALAPDAEWTEAAGFPYAGTYVGPQAIVENVFQRLGSEWDGYRAAVDRYFVDGD NVVAQGFYHGTYRATGKSFTASFAHVYTLKDGKIVKFEQIVDSAKVWEAMRA >Mature_131_residues TNRSNLDIVRATYEGKSEDNGRNLLAALAPDAEWTEAAGFPYAGTYVGPQAIVENVFQRLGSEWDGYRAAVDRYFVDGDN VVAQGFYHGTYRATGKSFTASFAHVYTLKDGKIVKFEQIVDSAKVWEAMRA
Specific function: Unknown
COG id: COG3631
COG function: function code R; Ketosteroid isomerase-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14641; Mature: 14510
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNRSNLDIVRATYEGKSEDNGRNLLAALAPDAEWTEAAGFPYAGTYVGPQAIVENVFQR CCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCHHCCCCCCCCCCCCHHHHHHHHHHH LGSEWDGYRAAVDRYFVDGDNVVAQGFYHGTYRATGKSFTASFAHVYTLKDGKIVKFEQI HCCCCCHHHHHHHHEEECCCCEEEECEECCEEEECCCCCEEEEEEEEEECCCCEEHHHHH VDSAKVWEAMRA HHHHHHHHHHCC >Mature Secondary Structure TNRSNLDIVRATYEGKSEDNGRNLLAALAPDAEWTEAAGFPYAGTYVGPQAIVENVFQR CCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCHHCCCCCCCCCCCCHHHHHHHHHHH LGSEWDGYRAAVDRYFVDGDNVVAQGFYHGTYRATGKSFTASFAHVYTLKDGKIVKFEQI HCCCCCHHHHHHHHEEECCCCEEEECEECCEEEECCCCCEEEEEEEEEECCCCEEHHHHH VDSAKVWEAMRA HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA