| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is tauC [H]
Identifier: 34498311
GI number: 34498311
Start: 3113717
End: 3114565
Strand: Reverse
Name: tauC [H]
Synonym: CV_2856
Alternate gene names: 34498311
Gene position: 3114565-3113717 (Counterclockwise)
Preceding gene: 34498312
Following gene: 34498310
Centisome position: 65.55
GC content: 71.26
Gene sequence:
>849_bases ATGAGCGGCATCGAAACCACCGCGGAGCGGGAGCTGTTGTCCGTTTCTTCCCGCATCGATGGAGGCCCGCGGCCGGGACG CGAGCCGTCCCGGCTATGGCTGGGCGCGGCCAGCCTGGCGGCCCTGCTGGGCGGCTGGTGGCTATTGGCGCATAGCGGCT GGGTGCCGGCGCTGTTTCTGCCCTCGCCGGAGGCGGTGCTGGGCAAGCTGTTTGTCGTCGCCGGACAGGGTTTCATGGAC GCCACGCTGTGGCAGCACCTGGAGGCCAGCTTGCAACGCATCGCGCTGGCATTGGTCGCCGCGGTGGCGGTGGGCGTGCC GCTGGGCGCGCTGATGGGGCGCAGCCCGCTGGCACAGGGTTTGCTTGATCCGATGCTGGAGGCATATCGTCCGGTGCCGC CGCTCGCCTACCTGCCGCTGATCGTGATCTGGTTCGGCATCGGCGAGCTGTCCAAGGTGCTGCTGATTTTCCTGGCCATC CTGGCGCCGGTGGCCATCGCCACCCGCCACGGCGTGGCCCAGGTCGGCCGCAACCGGCTGCGGGCGGCGCAGAGCCTGGG CGCCAGCCGTTCGCAGCTGCTGTGGCTGGTGGTGCTGCCGGAGGCGCTGCCGCAGATCCTCACCGGCATCCGCATCGGCC TGGGGGCCGGCTGGTCCACGCTGGTGGCGGCGGAGCTGGTGGCGGCCACGCGCGGCCTCGGCTTCATGGTGCAGTCGGCG GCGCAGTTCCTGGTTACCGACGTGGTGGTGCTGGGCATTCTGGCGATCGCCGCGGTGGCCTTCGCGCTGGAGCTGGGCCT GCGCGCGCTGCAGCGCCGGCTGGCGCCTTGGCATGGACAACAAGGCTGA
Upstream 100 bases:
>100_bases GCGACAGCGCGCGGGCGATCAAGTCCGATCCGGAGTTCATCGCGCTGCGGGAACAACTGCTGGCCGACGTGTTCGCCCAG CGCAAACAGGAGGCATGGGC
Downstream 100 bases:
>100_bases AGACTGATCGACAAAGATAATAGCGAGGAGATTCGCATGAGTTTGCAATTGACCCGCCTGAGCCCGGCGCTGGGCGCGGT GGTGGAGGGGATAGACCTGG
Product: taurine transport system permease
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MSGIETTAERELLSVSSRIDGGPRPGREPSRLWLGAASLAALLGGWWLLAHSGWVPALFLPSPEAVLGKLFVVAGQGFMD ATLWQHLEASLQRIALALVAAVAVGVPLGALMGRSPLAQGLLDPMLEAYRPVPPLAYLPLIVIWFGIGELSKVLLIFLAI LAPVAIATRHGVAQVGRNRLRAAQSLGASRSQLLWLVVLPEALPQILTGIRIGLGAGWSTLVAAELVAATRGLGFMVQSA AQFLVTDVVVLGILAIAAVAFALELGLRALQRRLAPWHGQQG
Sequences:
>Translated_282_residues MSGIETTAERELLSVSSRIDGGPRPGREPSRLWLGAASLAALLGGWWLLAHSGWVPALFLPSPEAVLGKLFVVAGQGFMD ATLWQHLEASLQRIALALVAAVAVGVPLGALMGRSPLAQGLLDPMLEAYRPVPPLAYLPLIVIWFGIGELSKVLLIFLAI LAPVAIATRHGVAQVGRNRLRAAQSLGASRSQLLWLVVLPEALPQILTGIRIGLGAGWSTLVAAELVAATRGLGFMVQSA AQFLVTDVVVLGILAIAAVAFALELGLRALQRRLAPWHGQQG >Mature_281_residues SGIETTAERELLSVSSRIDGGPRPGREPSRLWLGAASLAALLGGWWLLAHSGWVPALFLPSPEAVLGKLFVVAGQGFMDA TLWQHLEASLQRIALALVAAVAVGVPLGALMGRSPLAQGLLDPMLEAYRPVPPLAYLPLIVIWFGIGELSKVLLIFLAIL APVAIATRHGVAQVGRNRLRAAQSLGASRSQLLWLVVLPEALPQILTGIRIGLGAGWSTLVAAELVAATRGLGFMVQSAA QFLVTDVVVLGILAIAAVAFALELGLRALQRRLAPWHGQQG
Specific function: Part of a binding-protein-dependent transport system for taurine. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=248, Percent_Identity=68.1451612903226, Blast_Score=308, Evalue=2e-85, Organism=Escherichia coli, GI87081802, Length=233, Percent_Identity=37.3390557939914, Blast_Score=134, Evalue=9e-33, Organism=Escherichia coli, GI1789033, Length=172, Percent_Identity=33.7209302325581, Blast_Score=80, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 29699; Mature: 29567
Theoretical pI: Translated: 11.16; Mature: 11.16
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGIETTAERELLSVSSRIDGGPRPGREPSRLWLGAASLAALLGGWWLLAHSGWVPALFL CCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEC PSPEAVLGKLFVVAGQGFMDATLWQHLEASLQRIALALVAAVAVGVPLGALMGRSPLAQG CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH LLDPMLEAYRPVPPLAYLPLIVIWFGIGELSKVLLIFLAILAPVAIATRHGVAQVGRNRL HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAAQSLGASRSQLLWLVVLPEALPQILTGIRIGLGAGWSTLVAAELVAATRGLGFMVQSA HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH AQFLVTDVVVLGILAIAAVAFALELGLRALQRRLAPWHGQQG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SGIETTAERELLSVSSRIDGGPRPGREPSRLWLGAASLAALLGGWWLLAHSGWVPALFL CCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEC PSPEAVLGKLFVVAGQGFMDATLWQHLEASLQRIALALVAAVAVGVPLGALMGRSPLAQG CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH LLDPMLEAYRPVPPLAYLPLIVIWFGIGELSKVLLIFLAILAPVAIATRHGVAQVGRNRL HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAAQSLGASRSQLLWLVVLPEALPQILTGIRIGLGAGWSTLVAAELVAATRGLGFMVQSA HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH AQFLVTDVVVLGILAIAAVAFALELGLRALQRRLAPWHGQQG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8808933; 9278503 [H]