| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is tauD [H]
Identifier: 34498310
GI number: 34498310
Start: 3112847
End: 3113680
Strand: Reverse
Name: tauD [H]
Synonym: CV_2855
Alternate gene names: 34498310
Gene position: 3113680-3112847 (Counterclockwise)
Preceding gene: 34498311
Following gene: 34498309
Centisome position: 65.54
GC content: 67.75
Gene sequence:
>834_bases ATGAGTTTGCAATTGACCCGCCTGAGCCCGGCGCTGGGCGCGGTGGTGGAGGGGATAGACCTGGCGCGGCCCTTGGACGA CGAGCGGCGCCGGGCATTGAGCGAGGCGCTGCTGCGCCATCAGGTGCTGTTTTTCCGCGGCCAGGACATCACGCCGCTGC AGCAGCGCAATTTCGCGGTGCGCTTCGGCGACCTGCATACCCACCCGATCTACCCGCAGCATCCGGACGCGCGCGAGATC ATGGTGCTGGACACCGACGCGGTGGATTTGCAGGACAACGCGGTCTGGCACACCGACGTCACCTTCATCGAAACCCCGCC GCTGGGCGCGGTGCTGGCGGCGCGGCAACTGCCGGAACTGGGCGGCGACACGCTGTGGGCCAGCGGCATCGCCGCCTACG AGGCGCTGTCGGCCAGCCTGAAAGCCAGGCTGGACGGCCTGAGCGCGGTTCACGACTTCGCCAAATCCTTTCCGCTGGCG CGTTACGGCCTGACCGACGACGACCGCCGCCGCTGGGACGAGACCCGGCGCAAGCATCCGCCGATCAGCCATCCGCTGGT GCGCATCCATCCGGAAAGCGGCCGCCGCGCGCTGTTCGTCAGCGAAGGCTTCACCGTCGCCGTCAACGACTTGCCGGAAG CCGAGGGCCAGGCGTTGCTGCAATTCCTGTTCGCCCACCAATCCCGGCCGGAGTTTTCGATACGTTGGCGCTGGCAGCCG GGCGACGTGGCGTTTTGGGACAATCGCTGCACCATCCATTACGCGGTGGACGATTACCGGCCGGCGCGGCGGGTGATGCA CCGGGCGACGATACTGGGCGACCGTCCATACTAG
Upstream 100 bases:
>100_bases GCTGGAGCTGGGCCTGCGCGCGCTGCAGCGCCGGCTGGCGCCTTGGCATGGACAACAAGGCTGAAGACTGATCGACAAAG ATAATAGCGAGGAGATTCGC
Downstream 100 bases:
>100_bases GCGCGGCGCGCAAAACGCGGGTTCCGCTCTCAGGCGTTTGCCTGATGGTTTGAGGCGCGCTTCCGGCGACAAAGCCATCC CTCGGGGATGGCTTTGTCGT
Product: taurine dioxygenase
Products: NA
Alternate protein names: 2-aminoethanesulfonate dioxygenase; Sulfate starvation-induced protein 3; SSI3 [H]
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MSLQLTRLSPALGAVVEGIDLARPLDDERRRALSEALLRHQVLFFRGQDITPLQQRNFAVRFGDLHTHPIYPQHPDAREI MVLDTDAVDLQDNAVWHTDVTFIETPPLGAVLAARQLPELGGDTLWASGIAAYEALSASLKARLDGLSAVHDFAKSFPLA RYGLTDDDRRRWDETRRKHPPISHPLVRIHPESGRRALFVSEGFTVAVNDLPEAEGQALLQFLFAHQSRPEFSIRWRWQP GDVAFWDNRCTIHYAVDDYRPARRVMHRATILGDRPY
Sequences:
>Translated_277_residues MSLQLTRLSPALGAVVEGIDLARPLDDERRRALSEALLRHQVLFFRGQDITPLQQRNFAVRFGDLHTHPIYPQHPDAREI MVLDTDAVDLQDNAVWHTDVTFIETPPLGAVLAARQLPELGGDTLWASGIAAYEALSASLKARLDGLSAVHDFAKSFPLA RYGLTDDDRRRWDETRRKHPPISHPLVRIHPESGRRALFVSEGFTVAVNDLPEAEGQALLQFLFAHQSRPEFSIRWRWQP GDVAFWDNRCTIHYAVDDYRPARRVMHRATILGDRPY >Mature_276_residues SLQLTRLSPALGAVVEGIDLARPLDDERRRALSEALLRHQVLFFRGQDITPLQQRNFAVRFGDLHTHPIYPQHPDAREIM VLDTDAVDLQDNAVWHTDVTFIETPPLGAVLAARQLPELGGDTLWASGIAAYEALSASLKARLDGLSAVHDFAKSFPLAR YGLTDDDRRRWDETRRKHPPISHPLVRIHPESGRRALFVSEGFTVAVNDLPEAEGQALLQFLFAHQSRPEFSIRWRWQPG DVAFWDNRCTIHYAVDDYRPARRVMHRATILGDRPY
Specific function: Catalyzes the conversion of taurine and alpha ketoglutarate to sulfite, aminoacetaldehyde and succinate. Required for the utilization of taurine (2-aminoethanesulfonic acid) as an alternative sulfur source. Pentane-sulfonic acid, 3- (N-morpholino)propanes
COG id: COG2175
COG function: function code Q; Probable taurine catabolism dioxygenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tfdA dioxygenase family [H]
Homologues:
Organism=Escherichia coli, GI1786565, Length=275, Percent_Identity=58.9090909090909, Blast_Score=339, Evalue=1e-94, Organism=Saccharomyces cerevisiae, GI6322971, Length=291, Percent_Identity=29.8969072164948, Blast_Score=120, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003819 [H]
Pfam domain/function: PF02668 TauD [H]
EC number: =1.14.11.17 [H]
Molecular weight: Translated: 31506; Mature: 31375
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLQLTRLSPALGAVVEGIDLARPLDDERRRALSEALLRHQVLFFRGQDITPLQQRNFAV CCEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEEECCCCCHHHHCCEEE RFGDLHTHPIYPQHPDAREIMVLDTDAVDLQDNAVWHTDVTFIETPPLGAVLAARQLPEL EECCCCCCCCCCCCCCCCEEEEEECCCEECCCCEEEECCEEEEECCCCHHHHHHHHCCCC GGDTLWASGIAAYEALSASLKARLDGLSAVHDFAKSFPLARYGLTDDDRRRWDETRRKHP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHCCC PISHPLVRIHPESGRRALFVSEGFTVAVNDLPEAEGQALLQFLFAHQSRPEFSIRWRWQP CCCCCEEEEECCCCCEEEEEECCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECC GDVAFWDNRCTIHYAVDDYRPARRVMHRATILGDRPY CCEEEECCEEEEEEEECCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure SLQLTRLSPALGAVVEGIDLARPLDDERRRALSEALLRHQVLFFRGQDITPLQQRNFAV CEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEEECCCCCHHHHCCEEE RFGDLHTHPIYPQHPDAREIMVLDTDAVDLQDNAVWHTDVTFIETPPLGAVLAARQLPEL EECCCCCCCCCCCCCCCCEEEEEECCCEECCCCEEEECCEEEEECCCCHHHHHHHHCCCC GGDTLWASGIAAYEALSASLKARLDGLSAVHDFAKSFPLARYGLTDDDRRRWDETRRKHP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHCCC PISHPLVRIHPESGRRALFVSEGFTVAVNDLPEAEGQALLQFLFAHQSRPEFSIRWRWQP CCCCCEEEEECCCCCEEEEEECCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECC GDVAFWDNRCTIHYAVDDYRPARRVMHRATILGDRPY CCEEEECCEEEEEEEECCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8808933; 9278503; 2656410; 8774726; 7984428; 9287300; 11955067 [H]