| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is dhbF [H]
Identifier: 34498254
GI number: 34498254
Start: 3033775
End: 3035094
Strand: Reverse
Name: dhbF [H]
Synonym: CV_2799
Alternate gene names: 34498254
Gene position: 3035094-3033775 (Counterclockwise)
Preceding gene: 34498255
Following gene: 34498253
Centisome position: 63.88
GC content: 63.71
Gene sequence:
>1320_bases ATGACGGTGAAGCGATGGATGGTGCAGGATAGCGTGGGCAGCGGAGCGGCGCTGGCGAGTCTCGAAGGCGAGGAGACTGG CCGGCTTTGGCTAGCGGCCCAGCCGGAGCATGGATTCCAGACCTTGCAAGGCTTGGCTTATGCGCTGGCGCGCGAGGTGC GCCGTTTGCAGCCCGATAGCCCTTATCGGCTGGCGGGAAAAGGCGTTCTGGGCGCGCTGGCTTATGAAGTGGGCTTGCAG TTGCGAGGCATGGGGCAGACTGTAGCCTGCGTTGCGCTGGAGGGCGCGCCGGCATGGGTTCGACAGTCCGAAGCGCTGGC GGTCGAGCGGTCGCAAGCCAGTTTGCCGGCATGGTTGCGCCGCTGCCTTTCATCCTATGTCCCCGAACCGGGCGATTTTC CATTGCAGCCAACGAATATGCCGGCATCCGCCGAGGCTTTCTGGCGCGCTCTGGGCGCGCAAGCGAGCGCGCGAGTCCCT GCTCACCAGCCGCTGGTGATGCTCAGGCAGGGACGGCAATCGTTGCCGCCATTGATTTGCGTGCCGGGCGCGGGTGCCAG CGTGGTGGATTTCTTCGCGCTTTCTAGCGCGCTTGCCTATCAAGGGAGCGTGTATGGGCTGCAGCCAAGGGGGCTGGATG GCAGACAGCCTCCGCATGTGACGGTCGAGGATGCGGCGCGGTCGTATCTGGACGCGCTGCGGGCGAACGCGCCAGGGCCA GTGCATTTGCTTGGGCATTCCTTCGGCGGCTGGATCGCGCATGAGCTGGCGGCGCAATTGCAAAGCGCGGGAACCCGCGT GTTGTCGTTGACCGTGCTGGACAGCCGGGTGCCGAATGATGCGCCAGGCGAGTATGGCCAGCGCGAAGTGCTGAGCAGGC TGATTGCCTTATATCAGCAGGGTTGCGGAGAGCCGCTCAGACTCGATGCGGCGGAATTGGCGGAGCGAAGCGCGGAGGAG CAAAGAAAGGCTTTGCATGGCGAATTGCTCAGAGTCGGCATTCTGCCTTCTCGCAGCTCCCCGGATATCTTGAGCGGGGT GCTCAGAACCTTTGCTTGCGCTTTGCGAGCCGGATACCGGCCAGAGCGCTTGTATCAAGGCCCCAGCCGGCTGGTGCTGG TCAAACCGTCGGAAGCGCGTTCGTCAGAAGAGGCGACGTCGCGCGAGCAATGGATTGCGGGTTGGCGCAGATGGCTTCCC GACTTGGTGTTCTGGGAGGGGCCGGGCAATCACATCACCTTGTTGCGGTCGCCTCAGGCTGGGCACTTGGCGGCATGGTT GGACGAAATGCTGTTCGACATGAAAGCGGTGCACTCGTGA
Upstream 100 bases:
>100_bases CCGGATTCGCGACTCAGCGATTGCCGGCGGAAAACTAGGCATGGCTTGTCCATGATGGGCTGAATGGCGGCGATTTATCT GCCAATAGGATGAAAGGCTG
Downstream 100 bases:
>100_bases GCTTGGTGCTGAAGCGATTTCGATCCTTGGGCGCCGCGTTTGCTTGCATGTGGCTGAGCGAGATGATTACGGGCTTGGGC AGTCTATTGCTGCAATTCGC
Product: hypothetical protein
Products: pyrophosphate; AMP; enterobactin; pyrophosphate; L-Seryl-AMP [C]
Alternate protein names: NA
Number of amino acids: Translated: 439; Mature: 438
Protein sequence:
>439_residues MTVKRWMVQDSVGSGAALASLEGEETGRLWLAAQPEHGFQTLQGLAYALAREVRRLQPDSPYRLAGKGVLGALAYEVGLQ LRGMGQTVACVALEGAPAWVRQSEALAVERSQASLPAWLRRCLSSYVPEPGDFPLQPTNMPASAEAFWRALGAQASARVP AHQPLVMLRQGRQSLPPLICVPGAGASVVDFFALSSALAYQGSVYGLQPRGLDGRQPPHVTVEDAARSYLDALRANAPGP VHLLGHSFGGWIAHELAAQLQSAGTRVLSLTVLDSRVPNDAPGEYGQREVLSRLIALYQQGCGEPLRLDAAELAERSAEE QRKALHGELLRVGILPSRSSPDILSGVLRTFACALRAGYRPERLYQGPSRLVLVKPSEARSSEEATSREQWIAGWRRWLP DLVFWEGPGNHITLLRSPQAGHLAAWLDEMLFDMKAVHS
Sequences:
>Translated_439_residues MTVKRWMVQDSVGSGAALASLEGEETGRLWLAAQPEHGFQTLQGLAYALAREVRRLQPDSPYRLAGKGVLGALAYEVGLQ LRGMGQTVACVALEGAPAWVRQSEALAVERSQASLPAWLRRCLSSYVPEPGDFPLQPTNMPASAEAFWRALGAQASARVP AHQPLVMLRQGRQSLPPLICVPGAGASVVDFFALSSALAYQGSVYGLQPRGLDGRQPPHVTVEDAARSYLDALRANAPGP VHLLGHSFGGWIAHELAAQLQSAGTRVLSLTVLDSRVPNDAPGEYGQREVLSRLIALYQQGCGEPLRLDAAELAERSAEE QRKALHGELLRVGILPSRSSPDILSGVLRTFACALRAGYRPERLYQGPSRLVLVKPSEARSSEEATSREQWIAGWRRWLP DLVFWEGPGNHITLLRSPQAGHLAAWLDEMLFDMKAVHS >Mature_438_residues TVKRWMVQDSVGSGAALASLEGEETGRLWLAAQPEHGFQTLQGLAYALAREVRRLQPDSPYRLAGKGVLGALAYEVGLQL RGMGQTVACVALEGAPAWVRQSEALAVERSQASLPAWLRRCLSSYVPEPGDFPLQPTNMPASAEAFWRALGAQASARVPA HQPLVMLRQGRQSLPPLICVPGAGASVVDFFALSSALAYQGSVYGLQPRGLDGRQPPHVTVEDAARSYLDALRANAPGPV HLLGHSFGGWIAHELAAQLQSAGTRVLSLTVLDSRVPNDAPGEYGQREVLSRLIALYQQGCGEPLRLDAAELAERSAEEQ RKALHGELLRVGILPSRSSPDILSGVLRTFACALRAGYRPERLYQGPSRLVLVKPSEARSSEEATSREQWIAGWRRWLPD LVFWEGPGNHITLLRSPQAGHLAAWLDEMLFDMKAVHS
Specific function: Specifically adenylates threonine and glycine, and loads them onto their corresponding peptidyl carrier domains [H]
COG id: COG3319
COG function: function code Q; Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 acyl carrier domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010071 - InterPro: IPR009081 - InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR001242 - InterPro: IPR006163 - InterPro: IPR020806 - InterPro: IPR001031 [H]
Pfam domain/function: PF00501 AMP-binding; PF00668 Condensation; PF00550 PP-binding; PF00975 Thioesterase [H]
EC number: 2.7.7.- [C]
Molecular weight: Translated: 47626; Mature: 47495
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVKRWMVQDSVGSGAALASLEGEETGRLWLAAQPEHGFQTLQGLAYALAREVRRLQPDS CCCHHHHHHCCCCCCCEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCC PYRLAGKGVLGALAYEVGLQLRGMGQTVACVALEGAPAWVRQSEALAVERSQASLPAWLR CCEECCCHHHHHHHHHHCCCEECCCCEEEEEEECCCCHHHHCCHHHHHHHHHCCHHHHHH RCLSSYVPEPGDFPLQPTNMPASAEAFWRALGAQASARVPAHQPLVMLRQGRQSLPPLIC HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHCCCEEE VPGAGASVVDFFALSSALAYQGSVYGLQPRGLDGRQPPHVTVEDAARSYLDALRANAPGP ECCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCC VHLLGHSFGGWIAHELAAQLQSAGTRVLSLTVLDSRVPNDAPGEYGQREVLSRLIALYQQ EEEECCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH GCGEPLRLDAAELAERSAEEQRKALHGELLRVGILPSRSSPDILSGVLRTFACALRAGYR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHCCCC PERLYQGPSRLVLVKPSEARSSEEATSREQWIAGWRRWLPDLVFWEGPGNHITLLRSPQA HHHHHCCCCCEEEECCCHHCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCC GHLAAWLDEMLFDMKAVHS CHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TVKRWMVQDSVGSGAALASLEGEETGRLWLAAQPEHGFQTLQGLAYALAREVRRLQPDS CCHHHHHHCCCCCCCEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCC PYRLAGKGVLGALAYEVGLQLRGMGQTVACVALEGAPAWVRQSEALAVERSQASLPAWLR CCEECCCHHHHHHHHHHCCCEECCCCEEEEEEECCCCHHHHCCHHHHHHHHHCCHHHHHH RCLSSYVPEPGDFPLQPTNMPASAEAFWRALGAQASARVPAHQPLVMLRQGRQSLPPLIC HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHCCCEEE VPGAGASVVDFFALSSALAYQGSVYGLQPRGLDGRQPPHVTVEDAARSYLDALRANAPGP ECCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCC VHLLGHSFGGWIAHELAAQLQSAGTRVLSLTVLDSRVPNDAPGEYGQREVLSRLIALYQQ EEEECCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH GCGEPLRLDAAELAERSAEEQRKALHGELLRVGILPSRSSPDILSGVLRTFACALRAGYR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHCCCC PERLYQGPSRLVLVKPSEARSSEEATSREQWIAGWRRWLPDLVFWEGPGNHITLLRSPQA HHHHHCCCCCEEEECCCHHCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCC GHLAAWLDEMLFDMKAVHS CHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: Phosphopantetheine. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 6 ATP; L-serine; 2,3-dihydroxybenzoate [C]
Specific reaction: 6 ATP + 3 L-serine + 3 2,3-dihydroxybenzoate = 6 pyrophosphate + 6 AMP + enterobactin ATP + L-serine = pyrophosphate + L-Seryl-AMP 6 ATP + 3 L-serine + 3 2,3-dihydroxybenzoate = 6 pyrophosphate + 6 AMP + enterobactin ATP + L-serine = pyrophosphate + L-Ser
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11112781; 9384377; 10568751; 8550523 [H]