| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498225
Identifier: 34498225
GI number: 34498225
Start: 3009727
End: 3010164
Strand: Reverse
Name: 34498225
Synonym: CV_2770
Alternate gene names: NA
Gene position: 3010164-3009727 (Counterclockwise)
Preceding gene: 34498226
Following gene: 34498224
Centisome position: 63.36
GC content: 42.69
Gene sequence:
>438_bases ATGGGAGATATGAAAGTGATCATTAAGGAAGTGATGGCTTCCCGGCTCGGTATTGAGCCAGCTCATATCCGGTCCTACGA ACTTGATGGGCTAGTGTACCTGACTTGGGCTGATAGCTTAGTGGTAGGGGCGCAATGTAGGATTTGCTACTCTATAATTT GGGTTGATCAGCGAGTAAACCCAGTTCTGAGTGAGCCTAAACCTAATGTGGTTCCAGATTATGGGGGCGGGTATTATGAG TATCAGAAAGAGAAAGTTCACCGATTTTTAGCATCAATGCCTGCTTGTCCTAAATGCGGCGGAGAGGATTTTGATCGATT TATTAATAATGTAAATTATCCACGTTTTCAGAGTGGTAAGGAATTTCCAAAGGGTGTTGTTAGCTCGGATCTAATTAAAG AGGATGCTAGTGCTGTTCTGGTTTATTTTGTTGAGTAA
Upstream 100 bases:
>100_bases GCTTCATTTCATTCAGCCCAACCTACGGCCCTGTTGTTCTCTTTGGAGGACGTTACGACCCAAAGACAATTGTGCCGATT ATTGATGTCCGATTTCCATA
Downstream 100 bases:
>100_bases TTTTTAATGGGTGGAGCCGTAAATTGGGCTGAGCTTGCGAAGCCCAGCGCTCATTGCGATATATGGCGATCAATATTTAT GGGGTCGAGTATTTTCTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MGDMKVIIKEVMASRLGIEPAHIRSYELDGLVYLTWADSLVVGAQCRICYSIIWVDQRVNPVLSEPKPNVVPDYGGGYYE YQKEKVHRFLASMPACPKCGGEDFDRFINNVNYPRFQSGKEFPKGVVSSDLIKEDASAVLVYFVE
Sequences:
>Translated_145_residues MGDMKVIIKEVMASRLGIEPAHIRSYELDGLVYLTWADSLVVGAQCRICYSIIWVDQRVNPVLSEPKPNVVPDYGGGYYE YQKEKVHRFLASMPACPKCGGEDFDRFINNVNYPRFQSGKEFPKGVVSSDLIKEDASAVLVYFVE >Mature_144_residues GDMKVIIKEVMASRLGIEPAHIRSYELDGLVYLTWADSLVVGAQCRICYSIIWVDQRVNPVLSEPKPNVVPDYGGGYYEY QKEKVHRFLASMPACPKCGGEDFDRFINNVNYPRFQSGKEFPKGVVSSDLIKEDASAVLVYFVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16375; Mature: 16244
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDMKVIIKEVMASRLGIEPAHIRSYELDGLVYLTWADSLVVGAQCRICYSIIWVDQRVN CCHHHHHHHHHHHHHHCCCCHHCEEEECCCEEEEEECCCEEECCHHHHHHHEEECCCCCC PVLSEPKPNVVPDYGGGYYEYQKEKVHRFLASMPACPKCGGEDFDRFINNVNYPRFQSGK CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCC EFPKGVVSSDLIKEDASAVLVYFVE CCHHHHHHHHHHHCCCCEEEEEEEC >Mature Secondary Structure GDMKVIIKEVMASRLGIEPAHIRSYELDGLVYLTWADSLVVGAQCRICYSIIWVDQRVN CHHHHHHHHHHHHHHCCCCHHCEEEECCCEEEEEECCCEEECCHHHHHHHEEECCCCCC PVLSEPKPNVVPDYGGGYYEYQKEKVHRFLASMPACPKCGGEDFDRFINNVNYPRFQSGK CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCC EFPKGVVSSDLIKEDASAVLVYFVE CCHHHHHHHHHHHCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA