Click here to switch to the map view.

The map label for this gene is 34498221

Identifier: 34498221

GI number: 34498221

Start: 3004038

End: 3006305

Strand: Reverse

Name: 34498221

Synonym: CV_2766

Alternate gene names: NA

Gene position: 3006305-3004038 (Counterclockwise)

Preceding gene: 34498222

Following gene: 34498220

Centisome position: 63.28

GC content: 68.39

Gene sequence:

>2268_bases
GTGAGAAATCAGGGAAAATTCAAGCTTGGCGTGCTGTTGATCGGCCTGGCGTACTCCGCGTGCGCCTGGGCCGGTTTGGG
GAGGATTCATGTTCGCTCCAATCTGGGCGAACTGTTGAAGGCCGACATCGAAATGACCGGCGTGCAGCCGACGGAGCTGG
ATGCGGTCAGGGTGGGGCTGGCGGGTATCGAAACCTTCCAGGCTCTGAACGTCGATTACGCCAGCTCCCTGTCCTCGCTG
CGCTTCGCGCTGAGTCCCAACACCCGCGGCGCGACGATACGCGTCAGCTCCACCCAACCCATCAACGATCCCTACCTGCG
TTTCGTGGTCGAGGCCAAGGCGCCGTCCGGCCGCTCGGTCCGCGAATACACGGTGCTGCTCGATCCCGCCACCTACACGG
CGCAGAACATCGTTCAGGATGTGCCGAGCTATGCCGACAGCGATCAGGCCAGTCGTTACCGCCAGGCCGAGCCGGCGAAG
CTGGCGCCGGCCGCGCCGCGCGAACTGACGGTGCGCCAGGGCGCCACGCTGCGTTCGCTGGCGGCCAAGGTCAAGCCCAA
GGGCGCGTCCCTGAGGCAGACCATGGCCGCGCTGGCGCAGGCGAATCCCGACGCTTTCGCCGATGGAGACGTCAACCATC
CAAAACCCGGATCGAAGCTGCAGGTGCCGTCCGCGCGCAAGATGCGCGCCATGTCGGCGAGCCAGGTGGCCGGCATCCTG
GGCGAGCCGGCTCCGGCGGCGCAAGCTGCGCCCGCCGGCGGCCAGTCCGGCGCGTCCGCAGCGGGCAAGGGCGGCGACGT
GCTCAAGCTGGCGCCGGGAGACGGCGCGGACAATTCCAAGCTCAACGACCTGCAGCAGCAGATCAACGCCCGCGAAAAGG
CCCTGCAGGACGCCACCACCCGCATCGCGGCGCTGGAACAGCAGCTGAAGGCGCTGCAAAGCAGCCTGCAGGCATCGGGC
GCCAAGCTGGAGCCCATCGCCCAGGCCGCCGCGCCCGCGCCGTCCAGCTCGCCCGCCGCGGCGAGCGCGCCACATCCCGT
GGCGGCGGCCAGCGCGCCCAAGCCGATGCCCAAGCCCGTTGAGAAGCCCCATCCCAAGCCGCCGGCGCATCCGGCGCCGC
CGCCGGCCCCATCGTTGATGAGCAGAGTGTTGGGCTATCTGCCGCTTATCGGCGGCGGCGTGGCCGGGGTGGGTCTGCTG
GCCTTGCTGGGGATCATGATCGCCAGGCGGCGCAACGCGGCGGCCGACGCCGCGGGCAGCGCCGCGCTCAGCCGCAATAC
GGTGGGCGGCCACGGCCCGAGCACCGTCGGCGGCAGCAATTCCTTCATGAGCAACTTCACGCAGGCGGCCGGCGCCATCG
ATGCGGCCGAAGTCGATCCGGTGGCGGAGGCGGAGGTCTACATCGCTTACGGCCGTGACCAGCAGGCGGAGGAAATCCTC
AAGGACGCGCTGCAGAAGGACCCATCCCGCCACGAGGTCCGGATGAAATTGATGGAGGTGTACGCGGCGAGGCCGGATGT
GGCCAGTTTCGAACGCCTGGCCAAGGAGATGCACGCCGCTTTCGACGGCAAGGGCGTGATGTGGGCCAAGGCGGCCGCCT
TGGGCAGGGCCATCGATCCGAGCAACGCGCTGTATCAGATGCCGGAAGGCGACGCGGAGCCCTCGCCGTCTGCTGGCGGA
GGCGAAGTGATCGATCTGGACCAGGAGCTGTTCGGCGAGGAAGCGCCCGCGCCGATCGAGGCGGCGCCTGCTCCGGCCGA
ACCAGCGCCGGCGCAGGAGCAAGAGGCCGACCCGCTTGCCGCATTGTTCGATACGCCGCCTGGAGGCGCCGGGACGGCGC
CGGAAACCGAAGCCCATTCGCTGGATTTCGATCTGGACGCCATGCTGTCCGCCGAGACGGAAGCCGCGGAAGCCAAGGCC
CCTGAGCCTGAAGCCAATATGCTGGACTTCGACTTCAACCTGGAAGCCGCGCCGGCGGAGGAGGCCAAGCCGGCCGAGTC
GTCCGCCGGCGGCTTGGAGTCGCTGTACGAGGACATGCTGGCGGAAGAGCCGCAGGCGGCCGAGGCCCCTCCGGCCCCGC
CCGAGGCGAAAGCCGATGGGGTATCGGTGATGGACGACCCATTGGCCACCAAGCTCGACTTGGCCAAGGTTTATCTGGAT
ATGGGCGACCGCGAGGGCGCGAGGGAGGTTTTGCAGGATTTGCTGAGCGAGGCCAAGGGCGCGCTCAAGGACGAAGCCCA
GGCGTTATTCGACAAGATCAGCACTTGA

Upstream 100 bases:

>100_bases
CAACGTGCGAGGGCCTAAGATTGCAACAGTTGCACACTCGTCCCGCGGGGGGACGAGCGCCGATAACATCTGATAATGCG
ACAGTGCCGGAAGGTAGACA

Downstream 100 bases:

>100_bases
ACGACTTTCTTCTCTAGCCGACAGGCCGCCCGCAGCTATTTGTCTCGGGCGGCTTTTTTGATGTCGGCGATTTCCCAGGC
TGAATGGCGGGAGAATGCAG

Product: transmembrane protein

Products: NA

Alternate protein names: FimV N-Terminal Domain Protein; Tfp Pilus Assembly Protein FimV-Like Protein; FimV Protein; Type 4 Pilus Biogenesis; LysM Domain Protein; Motility Protein FimV; Lysm Domain; Transmembrane Tfp Pilus Assembly FimV Protein; TPR Repeat-Containing Protein; FimV C-Terminal Domain-Containing Protein; Tfp Pilus Assembly Protein FimV; LysM Domain-Containing Protein; Tfp Pilus Assembly Protein FimV-Like; Transmembrane Tfp Pilus Assembly Protein FimV; FimV N-Terminal Domain; FimV N-Terminal Domain-Containing Protein; FimV Type IV Pilus Assembly Protein

Number of amino acids: Translated: 755; Mature: 755

Protein sequence:

>755_residues
MRNQGKFKLGVLLIGLAYSACAWAGLGRIHVRSNLGELLKADIEMTGVQPTELDAVRVGLAGIETFQALNVDYASSLSSL
RFALSPNTRGATIRVSSTQPINDPYLRFVVEAKAPSGRSVREYTVLLDPATYTAQNIVQDVPSYADSDQASRYRQAEPAK
LAPAAPRELTVRQGATLRSLAAKVKPKGASLRQTMAALAQANPDAFADGDVNHPKPGSKLQVPSARKMRAMSASQVAGIL
GEPAPAAQAAPAGGQSGASAAGKGGDVLKLAPGDGADNSKLNDLQQQINAREKALQDATTRIAALEQQLKALQSSLQASG
AKLEPIAQAAAPAPSSSPAAASAPHPVAAASAPKPMPKPVEKPHPKPPAHPAPPPAPSLMSRVLGYLPLIGGGVAGVGLL
ALLGIMIARRRNAAADAAGSAALSRNTVGGHGPSTVGGSNSFMSNFTQAAGAIDAAEVDPVAEAEVYIAYGRDQQAEEIL
KDALQKDPSRHEVRMKLMEVYAARPDVASFERLAKEMHAAFDGKGVMWAKAAALGRAIDPSNALYQMPEGDAEPSPSAGG
GEVIDLDQELFGEEAPAPIEAAPAPAEPAPAQEQEADPLAALFDTPPGGAGTAPETEAHSLDFDLDAMLSAETEAAEAKA
PEPEANMLDFDFNLEAAPAEEAKPAESSAGGLESLYEDMLAEEPQAAEAPPAPPEAKADGVSVMDDPLATKLDLAKVYLD
MGDREGAREVLQDLLSEAKGALKDEAQALFDKIST

Sequences:

>Translated_755_residues
MRNQGKFKLGVLLIGLAYSACAWAGLGRIHVRSNLGELLKADIEMTGVQPTELDAVRVGLAGIETFQALNVDYASSLSSL
RFALSPNTRGATIRVSSTQPINDPYLRFVVEAKAPSGRSVREYTVLLDPATYTAQNIVQDVPSYADSDQASRYRQAEPAK
LAPAAPRELTVRQGATLRSLAAKVKPKGASLRQTMAALAQANPDAFADGDVNHPKPGSKLQVPSARKMRAMSASQVAGIL
GEPAPAAQAAPAGGQSGASAAGKGGDVLKLAPGDGADNSKLNDLQQQINAREKALQDATTRIAALEQQLKALQSSLQASG
AKLEPIAQAAAPAPSSSPAAASAPHPVAAASAPKPMPKPVEKPHPKPPAHPAPPPAPSLMSRVLGYLPLIGGGVAGVGLL
ALLGIMIARRRNAAADAAGSAALSRNTVGGHGPSTVGGSNSFMSNFTQAAGAIDAAEVDPVAEAEVYIAYGRDQQAEEIL
KDALQKDPSRHEVRMKLMEVYAARPDVASFERLAKEMHAAFDGKGVMWAKAAALGRAIDPSNALYQMPEGDAEPSPSAGG
GEVIDLDQELFGEEAPAPIEAAPAPAEPAPAQEQEADPLAALFDTPPGGAGTAPETEAHSLDFDLDAMLSAETEAAEAKA
PEPEANMLDFDFNLEAAPAEEAKPAESSAGGLESLYEDMLAEEPQAAEAPPAPPEAKADGVSVMDDPLATKLDLAKVYLD
MGDREGAREVLQDLLSEAKGALKDEAQALFDKIST
>Mature_755_residues
MRNQGKFKLGVLLIGLAYSACAWAGLGRIHVRSNLGELLKADIEMTGVQPTELDAVRVGLAGIETFQALNVDYASSLSSL
RFALSPNTRGATIRVSSTQPINDPYLRFVVEAKAPSGRSVREYTVLLDPATYTAQNIVQDVPSYADSDQASRYRQAEPAK
LAPAAPRELTVRQGATLRSLAAKVKPKGASLRQTMAALAQANPDAFADGDVNHPKPGSKLQVPSARKMRAMSASQVAGIL
GEPAPAAQAAPAGGQSGASAAGKGGDVLKLAPGDGADNSKLNDLQQQINAREKALQDATTRIAALEQQLKALQSSLQASG
AKLEPIAQAAAPAPSSSPAAASAPHPVAAASAPKPMPKPVEKPHPKPPAHPAPPPAPSLMSRVLGYLPLIGGGVAGVGLL
ALLGIMIARRRNAAADAAGSAALSRNTVGGHGPSTVGGSNSFMSNFTQAAGAIDAAEVDPVAEAEVYIAYGRDQQAEEIL
KDALQKDPSRHEVRMKLMEVYAARPDVASFERLAKEMHAAFDGKGVMWAKAAALGRAIDPSNALYQMPEGDAEPSPSAGG
GEVIDLDQELFGEEAPAPIEAAPAPAEPAPAQEQEADPLAALFDTPPGGAGTAPETEAHSLDFDLDAMLSAETEAAEAKA
PEPEANMLDFDFNLEAAPAEEAKPAESSAGGLESLYEDMLAEEPQAAEAPPAPPEAKADGVSVMDDPLATKLDLAKVYLD
MGDREGAREVLQDLLSEAKGALKDEAQALFDKIST

Specific function: Unknown

COG id: COG3170

COG function: function code NU; Tfp pilus assembly protein FimV

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 78138; Mature: 78138

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNQGKFKLGVLLIGLAYSACAWAGLGRIHVRSNLGELLKADIEMTGVQPTELDAVRVGL
CCCCCCEEHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
AGIETFQALNVDYASSLSSLRFALSPNTRGATIRVSSTQPINDPYLRFVVEAKAPSGRSV
HHHHHHHHHCCHHHHHHHHEEEEECCCCCCCEEEECCCCCCCCCEEEEEEEECCCCCCCC
REYTVLLDPATYTAQNIVQDVPSYADSDQASRYRQAEPAKLAPAAPRELTVRQGATLRSL
EEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCEEHHCCCHHHHH
AAKVKPKGASLRQTMAALAQANPDAFADGDVNHPKPGSKLQVPSARKMRAMSASQVAGIL
HHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHH
GEPAPAAQAAPAGGQSGASAAGKGGDVLKLAPGDGADNSKLNDLQQQINAREKALQDATT
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RIAALEQQLKALQSSLQASGAKLEPIAQAAAPAPSSSPAAASAPHPVAAASAPKPMPKPV
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EKPHPKPPAHPAPPPAPSLMSRVLGYLPLIGGGVAGVGLLALLGIMIARRRNAAADAAGS
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHCC
AALSRNTVGGHGPSTVGGSNSFMSNFTQAAGAIDAAEVDPVAEAEVYIAYGRDQQAEEIL
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCEEEEEECCCHHHHHHH
KDALQKDPSRHEVRMKLMEVYAARPDVASFERLAKEMHAAFDGKGVMWAKAAALGRAIDP
HHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCC
SNALYQMPEGDAEPSPSAGGGEVIDLDQELFGEEAPAPIEAAPAPAEPAPAQEQEADPLA
CCCEEECCCCCCCCCCCCCCCCEEECCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
ALFDTPPGGAGTAPETEAHSLDFDLDAMLSAETEAAEAKAPEPEANMLDFDFNLEAAPAE
HHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHCCCCCCCCCEEEECCCCCCCCCC
EAKPAESSAGGLESLYEDMLAEEPQAAEAPPAPPEAKADGVSVMDDPLATKLDLAKVYLD
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
MGDREGAREVLQDLLSEAKGALKDEAQALFDKIST
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRNQGKFKLGVLLIGLAYSACAWAGLGRIHVRSNLGELLKADIEMTGVQPTELDAVRVGL
CCCCCCEEHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
AGIETFQALNVDYASSLSSLRFALSPNTRGATIRVSSTQPINDPYLRFVVEAKAPSGRSV
HHHHHHHHHCCHHHHHHHHEEEEECCCCCCCEEEECCCCCCCCCEEEEEEEECCCCCCCC
REYTVLLDPATYTAQNIVQDVPSYADSDQASRYRQAEPAKLAPAAPRELTVRQGATLRSL
EEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCEEHHCCCHHHHH
AAKVKPKGASLRQTMAALAQANPDAFADGDVNHPKPGSKLQVPSARKMRAMSASQVAGIL
HHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHH
GEPAPAAQAAPAGGQSGASAAGKGGDVLKLAPGDGADNSKLNDLQQQINAREKALQDATT
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RIAALEQQLKALQSSLQASGAKLEPIAQAAAPAPSSSPAAASAPHPVAAASAPKPMPKPV
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EKPHPKPPAHPAPPPAPSLMSRVLGYLPLIGGGVAGVGLLALLGIMIARRRNAAADAAGS
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHCC
AALSRNTVGGHGPSTVGGSNSFMSNFTQAAGAIDAAEVDPVAEAEVYIAYGRDQQAEEIL
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCEEEEEECCCHHHHHHH
KDALQKDPSRHEVRMKLMEVYAARPDVASFERLAKEMHAAFDGKGVMWAKAAALGRAIDP
HHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCC
SNALYQMPEGDAEPSPSAGGGEVIDLDQELFGEEAPAPIEAAPAPAEPAPAQEQEADPLA
CCCEEECCCCCCCCCCCCCCCCEEECCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
ALFDTPPGGAGTAPETEAHSLDFDLDAMLSAETEAAEAKAPEPEANMLDFDFNLEAAPAE
HHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHCCCCCCCCCEEEECCCCCCCCCC
EAKPAESSAGGLESLYEDMLAEEPQAAEAPPAPPEAKADGVSVMDDPLATKLDLAKVYLD
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
MGDREGAREVLQDLLSEAKGALKDEAQALFDKIST
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA