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The map label for this gene is yafM [H]

Identifier: 34498122

GI number: 34498122

Start: 2880726

End: 2881256

Strand: Reverse

Name: yafM [H]

Synonym: CV_2667

Alternate gene names: 34498122

Gene position: 2881256-2880726 (Counterclockwise)

Preceding gene: 34498124

Following gene: 34498117

Centisome position: 60.64

GC content: 56.5

Gene sequence:

>531_bases
ATGCCCAACTATCGACGCTGGCGGGTGCCGGGCGGAACGTATTTCTTGACCTTCACGCTGCTGGAACGTGGCTCCAGCTT
GCTGGTGGATCATATCGACGCGCTGTGTGAGGCGGTGAGGCTGACTCGATGCGAGCGTCCATTTCATATCGATGGCTGGG
TGGTGTTGCCGGATCATGTGCATTGCATGATCACTCTGCCGCCCGGCGATGACGATTTTTCCAATCGCATCAAAGCCATC
AAAATCCGTTTCGTCCGCGCCATGCCCGCGTTGGAGTATCGCAATCCCGCTCGATGCCGCAATAGGGAACGTGGTATCTG
GCAACGCCGTTTCTGGGAACATTGCATCCGCTGCGAGGCTGACTACGCGGCGCATCTGGACTACATCCATATCAATCCGC
TCAAGCATGGTTTGGTGTCCCGCGTCCAGGATTGGCCGTTTTCCACTTTTCACCGAGCGGTCAAACGAGGCTTGTATCCG
CAAGACTGGGCGGGAGGAGATGACTTGATGTCGGTATCCGCGTTTGAATGA

Upstream 100 bases:

>100_bases
TGCAAACCCTGTGGCTGACTTTGCCGCCGGCCTTTTGACGGATTGGTGGGCTGGGGTTTCCGGACGTATGGTTTGGGCTT
TGGTGTTCTGGGGAATGACC

Downstream 100 bases:

>100_bases
TGTGTCCGCTTCGCGGACGATTGTTTGAGCACCGAGACCTTGGCGCGATGCGAGTTCGACCGAGCCTAGGGCACATTGTT
TTGACCGGCTCGCGCCAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MPNYRRWRVPGGTYFLTFTLLERGSSLLVDHIDALCEAVRLTRCERPFHIDGWVVLPDHVHCMITLPPGDDDFSNRIKAI
KIRFVRAMPALEYRNPARCRNRERGIWQRRFWEHCIRCEADYAAHLDYIHINPLKHGLVSRVQDWPFSTFHRAVKRGLYP
QDWAGGDDLMSVSAFE

Sequences:

>Translated_176_residues
MPNYRRWRVPGGTYFLTFTLLERGSSLLVDHIDALCEAVRLTRCERPFHIDGWVVLPDHVHCMITLPPGDDDFSNRIKAI
KIRFVRAMPALEYRNPARCRNRERGIWQRRFWEHCIRCEADYAAHLDYIHINPLKHGLVSRVQDWPFSTFHRAVKRGLYP
QDWAGGDDLMSVSAFE
>Mature_175_residues
PNYRRWRVPGGTYFLTFTLLERGSSLLVDHIDALCEAVRLTRCERPFHIDGWVVLPDHVHCMITLPPGDDDFSNRIKAIK
IRFVRAMPALEYRNPARCRNRERGIWQRRFWEHCIRCEADYAAHLDYIHINPLKHGLVSRVQDWPFSTFHRAVKRGLYPQ
DWAGGDDLMSVSAFE

Specific function: Unknown

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0217 [H]

Homologues:

Organism=Escherichia coli, GI1786422, Length=176, Percent_Identity=50.5681818181818, Blast_Score=172, Evalue=9e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20721; Mature: 20590

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNYRRWRVPGGTYFLTFTLLERGSSLLVDHIDALCEAVRLTRCERPFHIDGWVVLPDHV
CCCCCEEECCCCEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHCCCCEECCCEEECCCCE
HCMITLPPGDDDFSNRIKAIKIRFVRAMPALEYRNPARCRNRERGIWQRRFWEHCIRCEA
EEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHCCHHHHHHHHHHHHCCC
DYAAHLDYIHINPLKHGLVSRVQDWPFSTFHRAVKRGLYPQDWAGGDDLMSVSAFE
CHHHCCCEEEECHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEECCC
>Mature Secondary Structure 
PNYRRWRVPGGTYFLTFTLLERGSSLLVDHIDALCEAVRLTRCERPFHIDGWVVLPDHV
CCCCEEECCCCEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHCCCCEECCCEEECCCCE
HCMITLPPGDDDFSNRIKAIKIRFVRAMPALEYRNPARCRNRERGIWQRRFWEHCIRCEA
EEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHCCHHHHHHHHHHHHCCC
DYAAHLDYIHINPLKHGLVSRVQDWPFSTFHRAVKRGLYPQDWAGGDDLMSVSAFE
CHHHCCCEEEECHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7596361; 9278503 [H]