Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
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Accession | NC_005085 |
Length | 4,751,080 |
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The map label for this gene is entD [H]
Identifier: 34498105
GI number: 34498105
Start: 2863663
End: 2864376
Strand: Reverse
Name: entD [H]
Synonym: CV_2650
Alternate gene names: 34498105
Gene position: 2864376-2863663 (Counterclockwise)
Preceding gene: 34498107
Following gene: 34498101
Centisome position: 60.29
GC content: 67.23
Gene sequence:
>714_bases ATGCCCATTCCCGGCGCCGAATTAAGCGCTTTCCTGCACGATGTGTCTTATCTGTCTCTGGCGGAGGCGCCCGGCATGGC CGCCATGCATTGCCGGTTCCGCATCGCGGCCTACGACGACGCCTGGTTCGGCGCTTTGGGCGTGGCGCGTCCGGATACGT TGGCAAGGGCGGTGCCCAAGCGCAAGGCGGAATACCTGGCCGCGCGCTACCTGTGCCAGCTGCTGCTGGCCGAACGCGGC CTGCCCACCGCGGTGGGCAGCGGCCAGCATCGGCAGCCGCTGTGGCCGGAGGGCTGGACGGGGACGATCACCCATAGCGA CGAAACGGCGGTGGTGGCCTTGGCCCCCAGCGGCGAGGGCTTGATGCTGGGGCTGGATCTGGAGCGCTGGATGTCGGACA AGACCGCCGACAACGTGCATGAGGGAATACTGGTGCCAGGAGAGCGCGAGGCGCTGGCCGGACCGTGGCCGTTTCCGCAT GCGCTGACGCTGGCGTTTTCCGCCAAGGAGAGCCTGTTCAAGGCGCTGTACCCCAGAGTGGGGCAGTACTTCGACTTCAA CGCCGCGGAAATGACGCGCGTGGATTGGGACGCCGGGCGTTTCAGCATCCGCCTGCTGAAGACGCTGGCGCCGGGGCTGG AGGCCGGGCGGGCGTTCGACGGCAGTTTCCATCTGCGCGACGGTCAGGTGTTGACCCTGATCGCGGCGTTTTAA
Upstream 100 bases:
>100_bases GGAACGCCGCCGGGCGCTTGCGTCCGCGCGGTGCGGTGGTTACCCTTGCAGGCTGCCTCGGAGGCGCCTTTTAATCATGC AAACAGTTCATCTTGATACC
Downstream 100 bases:
>100_bases GCTTGCCGGCTTTCACCGCCAGGGTTCGGCAATGGGGGCGCAGACATGCTCCCGCATCGATTGACTTTTGCGCGGGTGCC GTCGCCTGGCCTTGGCAATG
Product: enterobactin synthetase component D /phosphopantetheinyl transferase
Products: pyrophosphate; AMP; enterobactin; aryl carrier protein/isochorismatase; 3',5'-ADP; serine activating enzyme + [C]
Alternate protein names: Enterobactin synthase component D; Enterochelin synthase D [H]
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MPIPGAELSAFLHDVSYLSLAEAPGMAAMHCRFRIAAYDDAWFGALGVARPDTLARAVPKRKAEYLAARYLCQLLLAERG LPTAVGSGQHRQPLWPEGWTGTITHSDETAVVALAPSGEGLMLGLDLERWMSDKTADNVHEGILVPGEREALAGPWPFPH ALTLAFSAKESLFKALYPRVGQYFDFNAAEMTRVDWDAGRFSIRLLKTLAPGLEAGRAFDGSFHLRDGQVLTLIAAF
Sequences:
>Translated_237_residues MPIPGAELSAFLHDVSYLSLAEAPGMAAMHCRFRIAAYDDAWFGALGVARPDTLARAVPKRKAEYLAARYLCQLLLAERG LPTAVGSGQHRQPLWPEGWTGTITHSDETAVVALAPSGEGLMLGLDLERWMSDKTADNVHEGILVPGEREALAGPWPFPH ALTLAFSAKESLFKALYPRVGQYFDFNAAEMTRVDWDAGRFSIRLLKTLAPGLEAGRAFDGSFHLRDGQVLTLIAAF >Mature_236_residues PIPGAELSAFLHDVSYLSLAEAPGMAAMHCRFRIAAYDDAWFGALGVARPDTLARAVPKRKAEYLAARYLCQLLLAERGL PTAVGSGQHRQPLWPEGWTGTITHSDETAVVALAPSGEGLMLGLDLERWMSDKTADNVHEGILVPGEREALAGPWPFPHA LTLAFSAKESLFKALYPRVGQYFDFNAAEMTRVDWDAGRFSIRLLKTLAPGLEAGRAFDGSFHLRDGQVLTLIAAF
Specific function: Catalyzes the transfer of the 4'-phosphopantetheine moiety from coenzyme A to apo-domains of both entB (an ArCP domain) and entF (a PCP domain). Plays an essential role in the assembly of the enterobactin [H]
COG id: COG2977
COG function: function code Q; Phosphopantetheinyl transferase component of siderophore synthetase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the P-Pant transferase superfamily. EntD family [H]
Homologues:
Organism=Escherichia coli, GI1786797, Length=125, Percent_Identity=42.4, Blast_Score=76, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008278 - InterPro: IPR003542 [H]
Pfam domain/function: PF01648 ACPS [H]
EC number: 2.7.8.- [C]
Molecular weight: Translated: 25836; Mature: 25705
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIPGAELSAFLHDVSYLSLAEAPGMAAMHCRFRIAAYDDAWFGALGVARPDTLARAVPK CCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCHHCCCCCCCCHHHHHHHHH RKAEYLAARYLCQLLLAERGLPTAVGSGQHRQPLWPEGWTGTITHSDETAVVALAPSGEG HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCE LMLGLDLERWMSDKTADNVHEGILVPGEREALAGPWPFPHALTLAFSAKESLFKALYPRV EEEEECHHHHHCCCCCCHHHCCEECCCCCCCCCCCCCCCHHEEEEHHHHHHHHHHHHHHH GQYFDFNAAEMTRVDWDAGRFSIRLLKTLAPGLEAGRAFDGSFHLRDGQVLTLIAAF CCCCCCCCHHEEEEECCCCHHHHHHHHHHCCCHHCCCCCCCEEEECCCCEEEEEEEC >Mature Secondary Structure PIPGAELSAFLHDVSYLSLAEAPGMAAMHCRFRIAAYDDAWFGALGVARPDTLARAVPK CCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCHHCCCCCCCCHHHHHHHHH RKAEYLAARYLCQLLLAERGLPTAVGSGQHRQPLWPEGWTGTITHSDETAVVALAPSGEG HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCE LMLGLDLERWMSDKTADNVHEGILVPGEREALAGPWPFPHALTLAFSAKESLFKALYPRV EEEEECHHHHHCCCCCCHHHCCEECCCCCCCCCCCCCCCHHEEEEHHHHHHHHHHHHHHH GQYFDFNAAEMTRVDWDAGRFSIRLLKTLAPGLEAGRAFDGSFHLRDGQVLTLIAAF CCCCCCCCHHEEEEECCCCHHHHHHHHHHCCCHHCCCCCCCEEEECCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 6 ATP; L-serine; 2,3-dihydroxybenzoate; Coenzyme A; apo-EntB; apo-serine activating enzyme [C]
Specific reaction: 6 ATP + 3 L-serine + 3 2,3-dihydroxybenzoate = 6 pyrophosphate + 6 AMP + enterobactin Coenzyme A + apo-EntB = aryl carrier protein/isochorismatase + 3',5'-ADP Coenzyme A + apo-serine activating enzyme = 3',5'-ADP + serine activating enzyme [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]