| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is narK2 [H]
Identifier: 34497999
GI number: 34497999
Start: 2736928
End: 2738307
Strand: Reverse
Name: narK2 [H]
Synonym: CV_2544
Alternate gene names: 34497999
Gene position: 2738307-2736928 (Counterclockwise)
Preceding gene: 34498000
Following gene: 34497998
Centisome position: 57.64
GC content: 65.22
Gene sequence:
>1380_bases ATGACTTATCTGATCAAACACTGGGAGCCGGAATCGGCTTCGTTCTGGCAGCAGCAGGGACGCTCGGTGGCGCGGCGCAA CCTGTGGATCTCGATTCCGGCGCTGACGCTGGCCTTCGTGATCTGGCAGGTGTGGAGCGTGGCGGTGCTGAACATGCCCA ATATCGGCTTCGGCTACACCCAGAACCAGCTGTTCTGGCTGGCGGCGCTGCCGGCCTTGTCCGGCGCCACGCTGCGCATC TTCTATTCCTTCATGGTGCCGGTGTTCGGCGGCCGCAAGTGGACGGCGATCTCCACCGCCAGCCTGCTGATTCCGGCGGT GGGCATAGGCTTCGCGGTGCAGAACCCGGACACCAGCTATGTGACCATGGTGACGCTGGCGCTGCTGTGCGGCTTCGGCG GCGGCAATTTCAGCTCCAGCATGGCCAATATCAGCTTCTTCTTCCCCAAGTCGGAAAAGGGCACCGCGCTGGGCCTGAAC GCCGGCCTGGGCAATCTGGGCGTATCCATCGTGCAGTTCGTGGTGCCCATCGTCATCACCATGGGCCTGTTCGGCCAGTT GGGCGGCGATCCGCAGCACTGGGTGAAGGGCGCGGCAGCCAAACAGATGTGGCTGCAGAACGCCGGCTTCGTCTGGGTGC CGTTCATCGTGCTGTCCACGCTGGCGGCCTGGTTCGGCATGAACGACCTGGCCTCGGCCAAATCCTCGTTTTCCGAGCAG GCGGTGATCTTCACCCGCAAGCATAACTGGCTGATGTGCTGGCTGTACGTGGGCACCTTCGGTTCTTTCATCGGCTTCTC CGCCGGCTTCCCGCTGCTGGTCAAGGGCCAGTTCCCCGACATCGACCCCACCCGCTACGCCTTCCTGGGCCCCTTGGTCG GCGCGCTGACCCGCCCGCTGGGCGGCTGGCTGGCCGACAAGATAGGCGGCGCCAAGGTGACGCAGACGGTGTTCGCGCTG ATGGTGCTGGGCGTGCTGGGCGTGATCTTTTTCCTGCCGCACGGCGGCCAGGGCGGCAACTTCTACGGTTTCTTCGCGAT GTTCCTGTGCCTGTTCGCGCTGACCGGCGTCGGCAATGGCTCCACCTTCATGCAGGTGCCGGCCATTTTCCTGACGCTGC ACCAGCGCATGGCCGGCCCGGGCGAGTCGGCCATGCGGCAGGCCACCCAGGACGCCACCCGCGAGGCGGCGGCGGTGCTC GGTTTCGCCGGCGCGATCGGCGCCTACGGCGGCTTCTTCATCCCCAAGAGCTACGGCACCTCCATCGCGATGACCGGCGG GGTAGAGGCGGCGCTGTACCTGTTCATCGCCTTCTACCTGAGCTGCCTGGCGATCAACGGCTGGTACTACGCCCGCAAGA ACGCGGAAGTGCGTTGCTGA
Upstream 100 bases:
>100_bases AATCGGCGGCAAGAGCCAAGGCGCGGGCGCGCGCGGCCGAGCCCGTCAATCCCATTCCCTTGACCAACGAACGCGGCTGA GCGCGGCGCGGGAGACACTG
Downstream 100 bases:
>100_bases TTGGCCGGCGCAATGCCCGGCAGAGCGTGCTAGCCGGGTATTGCACCCTACGGTTGGACGGAATGAAAAGCGCCCGCGGG CGCTTTTTTCCCGTCCGGCT
Product: nitrite extrusion protein
Products: NA
Alternate protein names: Nitrite facilitator 1 [H]
Number of amino acids: Translated: 459; Mature: 458
Protein sequence:
>459_residues MTYLIKHWEPESASFWQQQGRSVARRNLWISIPALTLAFVIWQVWSVAVLNMPNIGFGYTQNQLFWLAALPALSGATLRI FYSFMVPVFGGRKWTAISTASLLIPAVGIGFAVQNPDTSYVTMVTLALLCGFGGGNFSSSMANISFFFPKSEKGTALGLN AGLGNLGVSIVQFVVPIVITMGLFGQLGGDPQHWVKGAAAKQMWLQNAGFVWVPFIVLSTLAAWFGMNDLASAKSSFSEQ AVIFTRKHNWLMCWLYVGTFGSFIGFSAGFPLLVKGQFPDIDPTRYAFLGPLVGALTRPLGGWLADKIGGAKVTQTVFAL MVLGVLGVIFFLPHGGQGGNFYGFFAMFLCLFALTGVGNGSTFMQVPAIFLTLHQRMAGPGESAMRQATQDATREAAAVL GFAGAIGAYGGFFIPKSYGTSIAMTGGVEAALYLFIAFYLSCLAINGWYYARKNAEVRC
Sequences:
>Translated_459_residues MTYLIKHWEPESASFWQQQGRSVARRNLWISIPALTLAFVIWQVWSVAVLNMPNIGFGYTQNQLFWLAALPALSGATLRI FYSFMVPVFGGRKWTAISTASLLIPAVGIGFAVQNPDTSYVTMVTLALLCGFGGGNFSSSMANISFFFPKSEKGTALGLN AGLGNLGVSIVQFVVPIVITMGLFGQLGGDPQHWVKGAAAKQMWLQNAGFVWVPFIVLSTLAAWFGMNDLASAKSSFSEQ AVIFTRKHNWLMCWLYVGTFGSFIGFSAGFPLLVKGQFPDIDPTRYAFLGPLVGALTRPLGGWLADKIGGAKVTQTVFAL MVLGVLGVIFFLPHGGQGGNFYGFFAMFLCLFALTGVGNGSTFMQVPAIFLTLHQRMAGPGESAMRQATQDATREAAAVL GFAGAIGAYGGFFIPKSYGTSIAMTGGVEAALYLFIAFYLSCLAINGWYYARKNAEVRC >Mature_458_residues TYLIKHWEPESASFWQQQGRSVARRNLWISIPALTLAFVIWQVWSVAVLNMPNIGFGYTQNQLFWLAALPALSGATLRIF YSFMVPVFGGRKWTAISTASLLIPAVGIGFAVQNPDTSYVTMVTLALLCGFGGGNFSSSMANISFFFPKSEKGTALGLNA GLGNLGVSIVQFVVPIVITMGLFGQLGGDPQHWVKGAAAKQMWLQNAGFVWVPFIVLSTLAAWFGMNDLASAKSSFSEQA VIFTRKHNWLMCWLYVGTFGSFIGFSAGFPLLVKGQFPDIDPTRYAFLGPLVGALTRPLGGWLADKIGGAKVTQTVFALM VLGVLGVIFFLPHGGQGGNFYGFFAMFLCLFALTGVGNGSTFMQVPAIFLTLHQRMAGPGESAMRQATQDATREAAAVLG FAGAIGAYGGFFIPKSYGTSIAMTGGVEAALYLFIAFYLSCLAINGWYYARKNAEVRC
Specific function: Involved in excretion of nitrite produced by the dissimilatory reduction of nitrate [H]
COG id: COG2223
COG function: function code P; Nitrate/nitrite transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Nitrate/nitrite porter (TC 2.A.1.8) family [H]
Homologues:
Organism=Escherichia coli, GI1787475, Length=458, Percent_Identity=51.528384279476, Blast_Score=440, Evalue=1e-124, Organism=Escherichia coli, GI1787743, Length=458, Percent_Identity=49.1266375545852, Blast_Score=400, Evalue=1e-113,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004737 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 49490; Mature: 49359
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYLIKHWEPESASFWQQQGRSVARRNLWISIPALTLAFVIWQVWSVAVLNMPNIGFGYT CCEEEECCCCCCHHHHHHHHHHHHHHCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCC QNQLFWLAALPALSGATLRIFYSFMVPVFGGRKWTAISTASLLIPAVGIGFAVQNPDTSY CCCEEEEEHHHHCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCEEECCCCCHH VTMVTLALLCGFGGGNFSSSMANISFFFPKSEKGTALGLNAGLGNLGVSIVQFVVPIVIT HHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHH MGLFGQLGGDPQHWVKGAAAKQMWLQNAGFVWVPFIVLSTLAAWFGMNDLASAKSSFSEQ HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC AVIFTRKHNWLMCWLYVGTFGSFIGFSAGFPLLVKGQFPDIDPTRYAFLGPLVGALTRPL EEEEEECCCEEEEEEEHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHH GGWLADKIGGAKVTQTVFALMVLGVLGVIFFLPHGGQGGNFYGFFAMFLCLFALTGVGNG HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC STFMQVPAIFLTLHQRMAGPGESAMRQATQDATREAAAVLGFAGAIGAYGGFFIPKSYGT CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCC SIAMTGGVEAALYLFIAFYLSCLAINGWYYARKNAEVRC EEEECCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCC >Mature Secondary Structure TYLIKHWEPESASFWQQQGRSVARRNLWISIPALTLAFVIWQVWSVAVLNMPNIGFGYT CEEEECCCCCCHHHHHHHHHHHHHHCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCC QNQLFWLAALPALSGATLRIFYSFMVPVFGGRKWTAISTASLLIPAVGIGFAVQNPDTSY CCCEEEEEHHHHCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCEEECCCCCHH VTMVTLALLCGFGGGNFSSSMANISFFFPKSEKGTALGLNAGLGNLGVSIVQFVVPIVIT HHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHH MGLFGQLGGDPQHWVKGAAAKQMWLQNAGFVWVPFIVLSTLAAWFGMNDLASAKSSFSEQ HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC AVIFTRKHNWLMCWLYVGTFGSFIGFSAGFPLLVKGQFPDIDPTRYAFLGPLVGALTRPL EEEEEECCCEEEEEEEHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHH GGWLADKIGGAKVTQTVFALMVLGVLGVIFFLPHGGQGGNFYGFFAMFLCLFALTGVGNG HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC STFMQVPAIFLTLHQRMAGPGESAMRQATQDATREAAAVLGFAGAIGAYGGFFIPKSYGT CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCC SIAMTGGVEAALYLFIAFYLSCLAINGWYYARKNAEVRC EEEECCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2668029; 8905232; 9278503; 2657652 [H]